RNA–Protein interactions for RNA: ENST00000426909.1

SYNC-204, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-204ENST00000426909 PDIA6Q15084 440 aa13.76□□□□□ -0.21
SYNC-204ENST00000426909 CNBD1Q8NA66 436 aa13.76□□□□□ -0.21
SYNC-204ENST00000426909 NECTIN2Q92692 538 aa13.76□□□□□ -0.21
SYNC-204ENST00000426909 GCC1Q96CN9 775 aa13.76□□□□□ -0.21
SYNC-204ENST00000426909 DDX21Q9NR30 783 aaKnown RBP eCLIP13.76□□□□□ -0.21
SYNC-204ENST00000426909 DBF4Q9UBU7 674 aaPredicted RBP13.76□□□□□ -0.21
SYNC-204ENST00000426909 NIP7Q9Y221 180 aaKnown RBP eCLIP13.76□□□□□ -0.21
SYNC-204ENST00000426909 DPEP1P16444 411 aa13.75□□□□□ -0.21
SYNC-204ENST00000426909 YBX3P16989 372 aaKnown RBP eCLIP13.75□□□□□ -0.21
SYNC-204ENST00000426909 ST5P78524 1137 aa13.75□□□□□ -0.21
SYNC-204ENST00000426909 C8orf34Q49A92 452 aa13.75□□□□□ -0.21
SYNC-204ENST00000426909 TTLL7Q6ZT98 887 aa13.75□□□□□ -0.21
SYNC-204ENST00000426909 NBPF5PQ86XG9 351 aaPredicted RBP13.75□□□□□ -0.21
SYNC-204ENST00000426909 IPO9Q96P70 1041 aaKnown RBP13.75□□□□□ -0.21
SYNC-204ENST00000426909 ZBTB3Q9H5J0 574 aa13.75□□□□□ -0.21
SYNC-204ENST00000426909 CHPF2Q9P2E5 772 aa13.75□□□□□ -0.21
SYNC-204ENST00000426909 AFDNP55196 1824 aaKnown RBP13.75□□□□□ -0.21
SYNC-204ENST00000426909 KIAA1551Q9HCM1 1747 aa13.75□□□□□ -0.21
SYNC-204ENST00000426909 ATP10DQ9P241 1426 aa13.74□□□□□ -0.21
SYNC-204ENST00000426909 SLC4A2P04920 1241 aa13.74□□□□□ -0.21
SYNC-204ENST00000426909 CCT4P50991 539 aaKnown RBP13.74□□□□□ -0.21
SYNC-204ENST00000426909 HLFQ16534 295 aa13.74□□□□□ -0.21
SYNC-204ENST00000426909 PROSER3Q2NL68 480 aa13.74□□□□□ -0.21
SYNC-204ENST00000426909 PRR5LQ6MZQ0 368 aa13.74□□□□□ -0.21
SYNC-204ENST00000426909 LRP10Q7Z4F1 713 aa13.74□□□□□ -0.21
SYNC-204ENST00000426909 BRIP1Q9BX63 1249 aa13.74□□□□□ -0.21
SYNC-204ENST00000426909 HYPKQ9NX55 129 aa13.74□□□□□ -0.21
SYNC-204ENST00000426909 PIM2Q9P1W9 311 aa13.74□□□□□ -0.21
SYNC-204ENST00000426909 N4BP2Q86UW6 1770 aaPredicted RBP13.73□□□□□ -0.21
SYNC-204ENST00000426909 ANXA1P04083 346 aa13.73□□□□□ -0.21
SYNC-204ENST00000426909 PDE6BP35913 854 aa13.73□□□□□ -0.21
SYNC-204ENST00000426909 TPTE2Q6XPS3 522 aa13.73□□□□□ -0.21
SYNC-204ENST00000426909 GIGYF2Q6Y7W6 1299 aaKnown RBP13.73□□□□□ -0.21
SYNC-204ENST00000426909 COPS6Q7L5N1 327 aa13.73□□□□□ -0.21
SYNC-204ENST00000426909 SKAP1Q86WV1 359 aa13.73□□□□□ -0.21
SYNC-204ENST00000426909 DDRGK1Q96HY6 314 aa13.73□□□□□ -0.21
SYNC-204ENST00000426909 WWC3Q9ULE0 1092 aa13.73□□□□□ -0.21
SYNC-204ENST00000426909 H0YIN7 160 aa13.72□□□□□ -0.21
SYNC-204ENST00000426909 YY1P25490 414 aa13.72□□□□□ -0.21
SYNC-204ENST00000426909 GTF2E1P29083 439 aaPredicted RBP13.72□□□□□ -0.21
SYNC-204ENST00000426909 AIMP1Q12904 312 aaKnown RBP13.72□□□□□ -0.21
SYNC-204ENST00000426909 XAGE3Q8WTP9 111 aa13.72□□□□□ -0.21
SYNC-204ENST00000426909 NYXQ9GZU5 481 aa13.72□□□□□ -0.21
SYNC-204ENST00000426909 BCS1LQ9Y276 419 aa13.72□□□□□ -0.21
SYNC-204ENST00000426909 KCNA3P22001 575 aa13.71□□□□□ -0.21
SYNC-204ENST00000426909 CHRNA5P30532 468 aa13.71□□□□□ -0.21
SYNC-204ENST00000426909 NUCB1Q02818 461 aa13.71□□□□□ -0.21
SYNC-204ENST00000426909 HSP90AB3PQ58FF7 597 aa13.71□□□□□ -0.21
SYNC-204ENST00000426909 DALRD3Q5D0E6 543 aaKnown RBP13.71□□□□□ -0.21
SYNC-204ENST00000426909 C2CD5Q86YS7 1000 aa13.71□□□□□ -0.21
SYNC-204ENST00000426909 RPAP2Q8IXW5 612 aaPredicted RBP13.71□□□□□ -0.21
SYNC-204ENST00000426909 FAM177BA6PVY3 158 aa13.7□□□□□ -0.22
SYNC-204ENST00000426909 GPTP24298 496 aa13.7□□□□□ -0.22
SYNC-204ENST00000426909 PARP10Q53GL7 1025 aa13.7□□□□□ -0.22
SYNC-204ENST00000426909 ERICH6Q7L0X2 663 aa13.7□□□□□ -0.22
SYNC-204ENST00000426909 IBTKQ9P2D0 1353 aaPredicted RBP13.7□□□□□ -0.22
SYNC-204ENST00000426909 NUP98P52948 1817 aa13.69□□□□□ -0.22
SYNC-204ENST00000426909 ANKRD13DQ6ZTN6 518 aa13.69□□□□□ -0.22
SYNC-204ENST00000426909 PPP1R42Q7Z4L9 355 aa13.69□□□□□ -0.22
SYNC-204ENST00000426909 ZNF34Q8IZ26 560 aa13.69□□□□□ -0.22
SYNC-204ENST00000426909 CCDC24Q8N4L8 307 aa13.69□□□□□ -0.22
SYNC-204ENST00000426909 BRCA1P38398 1863 aaKnown RBP13.68□□□□□ -0.22
SYNC-204ENST00000426909 FLIIQ13045 1269 aa13.68□□□□□ -0.22
SYNC-204ENST00000426909 CHD1LQ86WJ1 897 aa13.68□□□□□ -0.22
SYNC-204ENST00000426909 PLBD2Q8NHP8 589 aa13.68□□□□□ -0.22
SYNC-204ENST00000426909 ZBTB47Q9UFB7 747 aaPredicted RBP13.68□□□□□ -0.22
SYNC-204ENST00000426909 NOP58Q9Y2X3 529 aaKnown RBP13.68□□□□□ -0.22
SYNC-204ENST00000426909 DLEC1Q9Y238 1755 aa13.68□□□□□ -0.22
SYNC-204ENST00000426909 UBN2Q6ZU65 1347 aa13.67□□□□□ -0.22
SYNC-204ENST00000426909 DDX58O95786 925 aaKnown RBP13.67□□□□□ -0.22
SYNC-204ENST00000426909 TTLL6Q8N841 843 aa13.67□□□□□ -0.22
SYNC-204ENST00000426909 ANKRD44Q8N8A2 993 aa13.67□□□□□ -0.22
SYNC-204ENST00000426909 ZNF622Q969S3 477 aaKnown RBP eCLIP13.67□□□□□ -0.22
SYNC-204ENST00000426909 ANKRD31Q8N7Z5 1873 aa13.67□□□□□ -0.22
SYNC-204ENST00000426909 CHD4Q14839 1912 aa13.66□□□□□ -0.22
SYNC-204ENST00000426909 HMMRO75330 724 aa13.66□□□□□ -0.22
SYNC-204ENST00000426909 GNAI3P08754 354 aa13.66□□□□□ -0.22
SYNC-204ENST00000426909 TCIRG1Q13488 830 aa13.66□□□□□ -0.22
SYNC-204ENST00000426909 SUSD4Q5VX71 490 aa13.66□□□□□ -0.22
SYNC-204ENST00000426909 RIC3Q7Z5B4 369 aa13.66□□□□□ -0.22
SYNC-204ENST00000426909 MASTLQ96GX5 879 aa13.66□□□□□ -0.22
SYNC-204ENST00000426909 UTP14AQ9BVJ6 771 aaKnown RBP13.66□□□□□ -0.22
SYNC-204ENST00000426909 UPF2Q9HAU5 1272 aaKnown RBP13.66□□□□□ -0.22
SYNC-204ENST00000426909 RIC1Q4ADV7 1423 aa13.65□□□□□ -0.22
SYNC-204ENST00000426909 ARFGEF1Q9Y6D6 1849 aa13.65□□□□□ -0.22
SYNC-204ENST00000426909 KLRG2A4D1S0 409 aaPredicted RBP13.65□□□□□ -0.22
SYNC-204ENST00000426909 EIF5BO60841 1220 aaKnown RBP13.65□□□□□ -0.22
SYNC-204ENST00000426909 NTSR2O95665 410 aa13.65□□□□□ -0.22
SYNC-204ENST00000426909 SRGNP10124 158 aa13.65□□□□□ -0.22
SYNC-204ENST00000426909 NPR1P16066 1061 aa13.65□□□□□ -0.22
SYNC-204ENST00000426909 FKBP5Q13451 457 aaPredicted RBP13.65□□□□□ -0.22
SYNC-204ENST00000426909 ERFEQ4G0M1 354 aa13.65□□□□□ -0.22
SYNC-204ENST00000426909 STYK1Q6J9G0 422 aa13.65□□□□□ -0.22
SYNC-204ENST00000426909 ARHGAP27Q6ZUM4 889 aa13.65□□□□□ -0.22
SYNC-204ENST00000426909 NUTM1Q86Y26 1132 aa13.65□□□□□ -0.22
SYNC-204ENST00000426909 SIRT2Q8IXJ6 389 aa13.65□□□□□ -0.22
SYNC-204ENST00000426909 CNKSR1Q969H4 720 aa13.65□□□□□ -0.22
SYNC-204ENST00000426909 DCTPP1Q9H773 170 aa13.65□□□□□ -0.22
SYNC-204ENST00000426909 PHAXQ9H814 394 aaKnown RBP13.65□□□□□ -0.22
SYNC-204ENST00000426909 ANKRD36CQ5JPF3 1778 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms