RNA–Protein interactions for RNA: ENST00000425942.3

TPM3P4-201, Transcript of tropomyosin 3 pseudogene 4, humanhuman

BASIC

Gene TPM3P4, Length 755 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P4-201ENST00000425942 KRTAP3-3Q9BYR6 98 aa11.61□□□□□ -0.55
TPM3P4-201ENST00000425942 KRTAP3-2Q9BYR7 98 aa11.61□□□□□ -0.55
TPM3P4-201ENST00000425942 MYH16Q9H6N6 1097 aa11.61□□□□□ -0.55
TPM3P4-201ENST00000425942 MBIPQ9NS73 344 aa11.61□□□□□ -0.55
TPM3P4-201ENST00000425942 ZBTB1Q9Y2K1 713 aa11.61□□□□□ -0.55
TPM3P4-201ENST00000425942 DLEC1Q9Y238 1755 aa11.61□□□□□ -0.55
TPM3P4-201ENST00000425942 LAMB2P55268 1798 aa11.6□□□□□ -0.55
TPM3P4-201ENST00000425942 PSDA5PKW4 1024 aaPredicted RBP11.6□□□□□ -0.55
TPM3P4-201ENST00000425942 KCNQ3O43525 872 aa11.6□□□□□ -0.55
TPM3P4-201ENST00000425942 NPM2Q86SE8 214 aaKnown RBP11.6□□□□□ -0.55
TPM3P4-201ENST00000425942 PLPP6Q8IY26 295 aa11.6□□□□□ -0.55
TPM3P4-201ENST00000425942 PCDHGA4Q9Y5G9 962 aa11.6□□□□□ -0.55
TPM3P4-201ENST00000425942 USP42Q9H9J4 1324 aaKnown RBP11.6□□□□□ -0.55
TPM3P4-201ENST00000425942 FANCIQ9NVI1 1328 aa11.6□□□□□ -0.55
TPM3P4-201ENST00000425942 TRAPPC3LQ5T215 181 aa11.59□□□□□ -0.55
TPM3P4-201ENST00000425942 INTS5Q6P9B9 1019 aaKnown RBP11.59□□□□□ -0.55
TPM3P4-201ENST00000425942 SPON1Q9HCB6 807 aa11.59□□□□□ -0.55
TPM3P4-201ENST00000425942 LAS1LQ9Y4W2 734 aaKnown RBP11.59□□□□□ -0.55
TPM3P4-201ENST00000425942 BRCA1P38398 1863 aaKnown RBP11.58□□□□□ -0.56
TPM3P4-201ENST00000425942 E9PSI1 815 aa11.58□□□□□ -0.56
TPM3P4-201ENST00000425942 NUDT7P0C024 238 aa11.58□□□□□ -0.56
TPM3P4-201ENST00000425942 EIF5P55010 431 aaKnown RBP11.58□□□□□ -0.56
TPM3P4-201ENST00000425942 CRISPLD2Q9H0B8 497 aa11.58□□□□□ -0.56
TPM3P4-201ENST00000425942 MIS18AQ9NYP9 233 aa11.58□□□□□ -0.56
TPM3P4-201ENST00000425942 PHF14O94880 888 aa11.57□□□□□ -0.56
TPM3P4-201ENST00000425942 RFC4P35249 363 aa11.57□□□□□ -0.56
TPM3P4-201ENST00000425942 COL23A1Q86Y22 540 aaPredicted RBP11.57□□□□□ -0.56
TPM3P4-201ENST00000425942 ATP10DQ9P241 1426 aa11.57□□□□□ -0.56
TPM3P4-201ENST00000425942 KIAA1551Q9HCM1 1747 aa11.57□□□□□ -0.56
TPM3P4-201ENST00000425942 ZBED9Q6R2W3 1325 aa11.57□□□□□ -0.56
TPM3P4-201ENST00000425942 POLD1P28340 1107 aa11.56□□□□□ -0.56
TPM3P4-201ENST00000425942 HDGFL1Q5TGJ6 251 aa11.56□□□□□ -0.56
TPM3P4-201ENST00000425942 NARFQ9UHQ1 456 aa11.56□□□□□ -0.56
TPM3P4-201ENST00000425942 ZNF652Q9Y2D9 606 aa11.56□□□□□ -0.56
TPM3P4-201ENST00000425942 USP16Q9Y5T5 823 aa11.56□□□□□ -0.56
TPM3P4-201ENST00000425942 IBTKQ9P2D0 1353 aaPredicted RBP11.55□□□□□ -0.56
TPM3P4-201ENST00000425942 ZPR1O75312 459 aa11.55□□□□□ -0.56
TPM3P4-201ENST00000425942 NLGN1Q8N2Q7 840 aa11.55□□□□□ -0.56
TPM3P4-201ENST00000425942 ARHGEF1Q92888 912 aaKnown RBP11.55□□□□□ -0.56
TPM3P4-201ENST00000425942 ZNF428Q96B54 188 aa11.55□□□□□ -0.56
TPM3P4-201ENST00000425942 SRCAPQ6ZRS2 3230 aa11.55□□□□□ -0.56
TPM3P4-201ENST00000425942 CARMIL3Q8ND23 1372 aa11.54□□□□□ -0.56
TPM3P4-201ENST00000425942 C10orf71Q711Q0 1435 aa11.54□□□□□ -0.56
TPM3P4-201ENST00000425942 PRAMEF22A3QJZ6 481 aa11.54□□□□□ -0.56
TPM3P4-201ENST00000425942 CT47B1P0C2W7 299 aaPredicted RBP11.54□□□□□ -0.56
TPM3P4-201ENST00000425942 CANXP27824 592 aaKnown RBP11.54□□□□□ -0.56
TPM3P4-201ENST00000425942 CCDC30Q5VVM6 783 aa11.54□□□□□ -0.56
TPM3P4-201ENST00000425942 DUSP27Q5VZP5 1158 aa11.54□□□□□ -0.56
TPM3P4-201ENST00000425942 CLEC4GQ6UXB4 293 aa11.54□□□□□ -0.56
TPM3P4-201ENST00000425942 AMIGO3Q86WK7 504 aa11.54□□□□□ -0.56
TPM3P4-201ENST00000425942 BBXQ8WY36 941 aaPredicted RBP11.54□□□□□ -0.56
TPM3P4-201ENST00000425942 TSR2Q969E8 191 aaKnown RBP11.54□□□□□ -0.56
TPM3P4-201ENST00000425942 DDX21Q9NR30 783 aaKnown RBP eCLIP11.54□□□□□ -0.56
TPM3P4-201ENST00000425942 DBF4Q9UBU7 674 aaPredicted RBP11.54□□□□□ -0.56
TPM3P4-201ENST00000425942 ANKRD31Q8N7Z5 1873 aa11.54□□□□□ -0.56
TPM3P4-201ENST00000425942 MYH3P11055 1940 aa11.53□□□□□ -0.56
TPM3P4-201ENST00000425942 ZBTB7AO95365 584 aa11.53□□□□□ -0.56
TPM3P4-201ENST00000425942 A1BGP04217 495 aa11.53□□□□□ -0.56
TPM3P4-201ENST00000425942 GYS1P13807 737 aa11.53□□□□□ -0.56
TPM3P4-201ENST00000425942 HNRNPUQ00839 825 aaKnown RBP eCLIP11.53□□□□□ -0.56
TPM3P4-201ENST00000425942 TWISTNBQ3B726 338 aaPredicted RBP11.53□□□□□ -0.56
TPM3P4-201ENST00000425942 KIF6Q6ZMV9 814 aa11.53□□□□□ -0.56
TPM3P4-201ENST00000425942 DZIP3Q86Y13 1208 aaKnown RBP11.53□□□□□ -0.56
TPM3P4-201ENST00000425942 SPNS2Q8IVW8 549 aa11.53□□□□□ -0.56
TPM3P4-201ENST00000425942 PTCD2Q8WV60 388 aaKnown RBP11.53□□□□□ -0.56
TPM3P4-201ENST00000425942 HYPKQ9NX55 129 aa11.53□□□□□ -0.56
TPM3P4-201ENST00000425942 ARFGEF1Q9Y6D6 1849 aa11.53□□□□□ -0.56
TPM3P4-201ENST00000425942 RIC1Q4ADV7 1423 aa11.52□□□□□ -0.56
TPM3P4-201ENST00000425942 COL11A2P13942 1736 aaPredicted RBP11.52□□□□□ -0.56
TPM3P4-201ENST00000425942 NBPF26B4DH59 902 aa11.52□□□□□ -0.57
TPM3P4-201ENST00000425942 ERVV-1B6SEH8 477 aa11.52□□□□□ -0.57
TPM3P4-201ENST00000425942 PTGER2P43116 358 aa11.52□□□□□ -0.57
TPM3P4-201ENST00000425942 NBPF10Q6P3W6 841 aaKnown RBP11.52□□□□□ -0.57
TPM3P4-201ENST00000425942 ZNF687Q8N1G0 1237 aa11.52□□□□□ -0.57
TPM3P4-201ENST00000425942 NBPF15Q8N660 670 aa11.52□□□□□ -0.57
TPM3P4-201ENST00000425942 STK31Q9BXU1 1019 aa11.52□□□□□ -0.57
TPM3P4-201ENST00000425942 PDGFDQ9GZP0 370 aaPredicted RBP11.52□□□□□ -0.57
TPM3P4-201ENST00000425942 SALL2Q9Y467 1007 aaPredicted RBP11.52□□□□□ -0.57
TPM3P4-201ENST00000425942 PXDNLA1KZ92 1463 aa11.51□□□□□ -0.57
TPM3P4-201ENST00000425942 CAMTA2O94983 1202 aa11.51□□□□□ -0.57
TPM3P4-201ENST00000425942 EIF2S2P20042 333 aaKnown RBP11.51□□□□□ -0.57
TPM3P4-201ENST00000425942 SLFN5Q08AF3 891 aa11.51□□□□□ -0.57
TPM3P4-201ENST00000425942 KRT24Q2M2I5 525 aa11.51□□□□□ -0.57
TPM3P4-201ENST00000425942 PPP1R15BQ5SWA1 713 aa11.51□□□□□ -0.57
TPM3P4-201ENST00000425942 USPL1Q5W0Q7 1092 aa11.51□□□□□ -0.57
TPM3P4-201ENST00000425942 LRP10Q7Z4F1 713 aa11.51□□□□□ -0.57
TPM3P4-201ENST00000425942 CHPF2Q9P2E5 772 aa11.51□□□□□ -0.57
TPM3P4-201ENST00000425942 LHX6Q9UPM6 363 aa11.51□□□□□ -0.57
TPM3P4-201ENST00000425942 ZNF330Q9Y3S2 320 aaPredicted RBP11.51□□□□□ -0.57
TPM3P4-201ENST00000425942 MAP3K15Q6ZN16 1313 aa11.51□□□□□ -0.57
TPM3P4-201ENST00000425942 DDX60Q8IY21 1712 aaKnown RBP11.5□□□□□ -0.57
TPM3P4-201ENST00000425942 PDE4AP27815 886 aa11.5□□□□□ -0.57
TPM3P4-201ENST00000425942 HSP90AB3PQ58FF7 597 aa11.5□□□□□ -0.57
TPM3P4-201ENST00000425942 PPP1R1BQ9UD71 204 aaPredicted RBP11.5□□□□□ -0.57
TPM3P4-201ENST00000425942 RNF123Q5XPI4 1314 aa11.5□□□□□ -0.57
TPM3P4-201ENST00000425942 CACNA1SQ13698 1873 aa11.5□□□□□ -0.57
TPM3P4-201ENST00000425942 MYL6BP14649 208 aa11.49□□□□□ -0.57
TPM3P4-201ENST00000425942 PDIA6Q15084 440 aa11.49□□□□□ -0.57
TPM3P4-201ENST00000425942 TRMT2AQ8IZ69 625 aaKnown RBP11.49□□□□□ -0.57
TPM3P4-201ENST00000425942 C8orf58Q8NAV2 365 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms