RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 RNF123Q5XPI4 1314 aa23.25■■□□□ 1.31
HDAC7-208ENST00000425451 COL4A5P29400 1685 aa23.25■■□□□ 1.31
HDAC7-208ENST00000425451 RIC1Q4ADV7 1423 aa23.25■■□□□ 1.31
HDAC7-208ENST00000425451 GPC2Q8N158 579 aa23.24■■□□□ 1.31
HDAC7-208ENST00000425451 IBTKQ9P2D0 1353 aaPredicted RBP23.24■■□□□ 1.31
HDAC7-208ENST00000425451 CC2D2BQ6DHV5 1058 aa23.23■■□□□ 1.31
HDAC7-208ENST00000425451 SLC51AQ86UW1 340 aa23.23■■□□□ 1.31
HDAC7-208ENST00000425451 TMEM88BA6NKF7 163 aa23.22■■□□□ 1.31
HDAC7-208ENST00000425451 LRP10Q7Z4F1 713 aa23.22■■□□□ 1.31
HDAC7-208ENST00000425451 PNMA8AQ86V59 439 aaPredicted RBP23.22■■□□□ 1.31
HDAC7-208ENST00000425451 CLEC11AQ9Y240 323 aa23.22■■□□□ 1.31
HDAC7-208ENST00000425451 NTSR2O95665 410 aa23.21■■□□□ 1.31
HDAC7-208ENST00000425451 VEGFBP49765 207 aa23.21■■□□□ 1.31
HDAC7-208ENST00000425451 GIGYF2Q6Y7W6 1299 aaKnown RBP23.21■■□□□ 1.31
HDAC7-208ENST00000425451 C3orf67Q6ZVT6 689 aa23.21■■□□□ 1.31
HDAC7-208ENST00000425451 JDP2Q8WYK2 163 aa23.21■■□□□ 1.31
HDAC7-208ENST00000425451 RPGRQ92834 1020 aaKnown RBP23.21■■□□□ 1.31
HDAC7-208ENST00000425451 ERBB4Q15303 1308 aa23.2■■□□□ 1.3
HDAC7-208ENST00000425451 PDIA6Q15084 440 aa23.2■■□□□ 1.3
HDAC7-208ENST00000425451 MAP1SQ66K74 1059 aaPredicted RBP23.2■■□□□ 1.3
HDAC7-208ENST00000425451 CNTROBQ8N137 903 aa23.2■■□□□ 1.3
HDAC7-208ENST00000425451 CRAMP1Q96RY5 1269 aa23.2■■□□□ 1.3
HDAC7-208ENST00000425451 FOXN1O15353 648 aa23.19■■□□□ 1.3
HDAC7-208ENST00000425451 MAPK8IP3Q9UPT6 1336 aa23.18■■□□□ 1.3
HDAC7-208ENST00000425451 RBM17Q96I25 401 aaKnown RBP23.18■■□□□ 1.3
HDAC7-208ENST00000425451 PNNQ9H307 717 aaKnown RBP23.18■■□□□ 1.3
HDAC7-208ENST00000425451 LTBP1Q14766 1721 aa23.18■■□□□ 1.3
HDAC7-208ENST00000425451 GRIPAP1Q4V328 841 aa23.17■■□□□ 1.3
HDAC7-208ENST00000425451 TSPYL4Q9UJ04 414 aa23.17■■□□□ 1.3
HDAC7-208ENST00000425451 PPEF1O14829 653 aaPredicted RBP23.16■■□□□ 1.3
HDAC7-208ENST00000425451 EIF6P56537 245 aaKnown RBP23.16■■□□□ 1.3
HDAC7-208ENST00000425451 GJA3Q9Y6H8 435 aa23.16■■□□□ 1.3
HDAC7-208ENST00000425451 RASSF10A6NK89 507 aa23.15■■□□□ 1.3
HDAC7-208ENST00000425451 TCERG1O14776 1098 aaKnown RBP23.15■■□□□ 1.3
HDAC7-208ENST00000425451 SCNN1DP51172 638 aa23.15■■□□□ 1.3
HDAC7-208ENST00000425451 PROSER3Q2NL68 480 aa23.15■■□□□ 1.3
HDAC7-208ENST00000425451 PARP10Q53GL7 1025 aa23.15■■□□□ 1.3
HDAC7-208ENST00000425451 SLC10A5Q5PT55 438 aa23.15■■□□□ 1.3
HDAC7-208ENST00000425451 PPP1R42Q7Z4L9 355 aa23.15■■□□□ 1.3
HDAC7-208ENST00000425451 LARGE2Q8N3Y3 721 aa23.15■■□□□ 1.3
HDAC7-208ENST00000425451 EIF2S2P20042 333 aaKnown RBP23.14■■□□□ 1.29
HDAC7-208ENST00000425451 EPS15P42566 896 aa23.14■■□□□ 1.29
HDAC7-208ENST00000425451 RIPK4P57078 832 aa23.14■■□□□ 1.29
HDAC7-208ENST00000425451 ANXA1P04083 346 aa23.13■■□□□ 1.29
HDAC7-208ENST00000425451 NLRP3Q96P20 1036 aa23.13■■□□□ 1.29
HDAC7-208ENST00000425451 WBP1LQ9NX94 342 aa23.13■■□□□ 1.29
HDAC7-208ENST00000425451 DEFB115Q30KQ5 88 aa23.12■■□□□ 1.29
HDAC7-208ENST00000425451 UTP14AQ9BVJ6 771 aaKnown RBP23.12■■□□□ 1.29
HDAC7-208ENST00000425451 PRDM10Q9NQV6 1147 aa23.12■■□□□ 1.29
HDAC7-208ENST00000425451 BABAM1Q9NWV8 329 aa23.12■■□□□ 1.29
HDAC7-208ENST00000425451 ATP6V0A2Q9Y487 856 aa23.12■■□□□ 1.29
HDAC7-208ENST00000425451 FMR1Q06787 632 aaKnown RBP eCLIP23.11■■□□□ 1.29
HDAC7-208ENST00000425451 DDX21Q9NR30 783 aaKnown RBP eCLIP23.11■■□□□ 1.29
HDAC7-208ENST00000425451 LMOD1P29536 600 aaPredicted RBP23.1■■□□□ 1.29
HDAC7-208ENST00000425451 CTCFP49711 727 aaPredicted RBP23.1■■□□□ 1.29
HDAC7-208ENST00000425451 ABCC4O15439 1325 aa23.09■■□□□ 1.29
HDAC7-208ENST00000425451 PPIP5K2O43314 1243 aa23.09■■□□□ 1.29
HDAC7-208ENST00000425451 TMPOP42166 694 aaKnown RBP23.09■■□□□ 1.29
HDAC7-208ENST00000425451 AOC3Q16853 763 aa23.09■■□□□ 1.29
HDAC7-208ENST00000425451 NIM1KQ8IY84 436 aa23.09■■□□□ 1.29
HDAC7-208ENST00000425451 RTFDC1Q9BY42 306 aaPredicted RBP23.09■■□□□ 1.29
HDAC7-208ENST00000425451 USP50Q70EL3 339 aaPredicted RBP23.08■■□□□ 1.29
HDAC7-208ENST00000425451 COPS6Q7L5N1 327 aa23.08■■□□□ 1.29
HDAC7-208ENST00000425451 AIDAQ96BJ3 306 aa23.08■■□□□ 1.29
HDAC7-208ENST00000425451 VPS33BQ9H267 617 aa23.08■■□□□ 1.29
HDAC7-208ENST00000425451 WDR33Q9C0J8 1336 aaKnown RBP23.08■■□□□ 1.28
HDAC7-208ENST00000425451 NLRP10Q86W26 655 aa23.07■■□□□ 1.28
HDAC7-208ENST00000425451 XAGE3Q8WTP9 111 aa23.07■■□□□ 1.28
HDAC7-208ENST00000425451 NECTIN2Q92692 538 aa23.07■■□□□ 1.28
HDAC7-208ENST00000425451 ABT1Q9ULW3 272 aaKnown RBP23.07■■□□□ 1.28
HDAC7-208ENST00000425451 HCLS1P14317 486 aaPredicted RBP23.06■■□□□ 1.28
HDAC7-208ENST00000425451 CXCL9Q07325 125 aa23.06■■□□□ 1.28
HDAC7-208ENST00000425451 AIMP1Q12904 312 aaKnown RBP23.06■■□□□ 1.28
HDAC7-208ENST00000425451 LAMB2P55268 1798 aa23.05■■□□□ 1.28
HDAC7-208ENST00000425451 BBOX1O75936 387 aa23.05■■□□□ 1.28
HDAC7-208ENST00000425451 LBX1P52954 281 aa23.05■■□□□ 1.28
HDAC7-208ENST00000425451 RALBP1Q15311 655 aa23.05■■□□□ 1.28
HDAC7-208ENST00000425451 KRT24Q2M2I5 525 aa23.05■■□□□ 1.28
HDAC7-208ENST00000425451 CST9Q5W186 159 aa23.05■■□□□ 1.28
HDAC7-208ENST00000425451 SP8Q8IXZ3 490 aa23.05■■□□□ 1.28
HDAC7-208ENST00000425451 GPRC5DQ9NZD1 345 aa23.05■■□□□ 1.28
HDAC7-208ENST00000425451 ZNRF3Q9ULT6 936 aa23.05■■□□□ 1.28
HDAC7-208ENST00000425451 ANKRD36CQ5JPF3 1778 aa23.04■■□□□ 1.28
HDAC7-208ENST00000425451 TRAF5O00463 557 aa23.04■■□□□ 1.28
HDAC7-208ENST00000425451 TCIRG1Q13488 830 aa23.04■■□□□ 1.28
HDAC7-208ENST00000425451 TMX4Q9H1E5 349 aaPredicted RBP23.04■■□□□ 1.28
HDAC7-208ENST00000425451 CHL1O00533 1208 aa23.03■■□□□ 1.28
HDAC7-208ENST00000425451 LMOD3Q0VAK6 560 aa23.03■■□□□ 1.28
HDAC7-208ENST00000425451 HSP90AB3PQ58FF7 597 aa23.03■■□□□ 1.28
HDAC7-208ENST00000425451 SUPT20HQ8NEM7 779 aa23.03■■□□□ 1.28
HDAC7-208ENST00000425451 ADARB2Q9NS39 739 aaKnown RBP23.03■■□□□ 1.28
HDAC7-208ENST00000425451 HSPA8P11142 646 aaKnown RBP23.02■■□□□ 1.28
HDAC7-208ENST00000425451 DPP8Q6V1X1 898 aaPredicted RBP23.02■■□□□ 1.28
HDAC7-208ENST00000425451 MPNDQ8N594 471 aa23.02■■□□□ 1.28
HDAC7-208ENST00000425451 TRMT112Q9UI30 125 aaKnown RBP23.02■■□□□ 1.28
HDAC7-208ENST00000425451 GMPSP49915 693 aaPredicted RBP23.01■■□□□ 1.27
HDAC7-208ENST00000425451 MAP2K1Q02750 393 aaPredicted RBP23.01■■□□□ 1.27
HDAC7-208ENST00000425451 KIAA2012Q0VF49 1180 aa23.01■■□□□ 1.27
HDAC7-208ENST00000425451 NEUROD2Q15784 382 aa23■■□□□ 1.27
HDAC7-208ENST00000425451 CCDC146Q8IYE0 955 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms