RNA–Protein interactions for RNA: ENST00000422593.5

NICN1-202, Transcript of nicolin 1, humanhuman

TSL 3

Gene NICN1, Length 742 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1-202ENST00000422593 TMEM88BA6NKF7 163 aa17.4■□□□□ 0.38
NICN1-202ENST00000422593 ITGBL1O95965 494 aaPredicted RBP17.4■□□□□ 0.38
NICN1-202ENST00000422593 CC2D2BQ6DHV5 1058 aa17.4■□□□□ 0.38
NICN1-202ENST00000422593 PNMA8AQ86V59 439 aaPredicted RBP17.4■□□□□ 0.38
NICN1-202ENST00000422593 GPC2Q8N158 579 aa17.4■□□□□ 0.38
NICN1-202ENST00000422593 RBM17Q96I25 401 aaKnown RBP17.4■□□□□ 0.38
NICN1-202ENST00000422593 GJA3Q9Y6H8 435 aa17.4■□□□□ 0.38
NICN1-202ENST00000422593 UBN2Q6ZU65 1347 aa17.4■□□□□ 0.38
NICN1-202ENST00000422593 ADAMTSL1Q8N6G6 1762 aa17.39■□□□□ 0.37
NICN1-202ENST00000422593 EIF2S2P20042 333 aaKnown RBP17.39■□□□□ 0.37
NICN1-202ENST00000422593 EIF6P56537 245 aaKnown RBP17.39■□□□□ 0.37
NICN1-202ENST00000422593 GIGYF2Q6Y7W6 1299 aaKnown RBP17.39■□□□□ 0.37
NICN1-202ENST00000422593 PPP1R42Q7Z4L9 355 aa17.39■□□□□ 0.37
NICN1-202ENST00000422593 ZNF34Q8IZ26 560 aa17.39■□□□□ 0.37
NICN1-202ENST00000422593 TSPYL4Q9UJ04 414 aa17.39■□□□□ 0.37
NICN1-202ENST00000422593 CNTNAP1P78357 1384 aa17.39■□□□□ 0.37
NICN1-202ENST00000422593 HOXA10P31260 410 aaPredicted RBP17.38■□□□□ 0.37
NICN1-202ENST00000422593 MAP1SQ66K74 1059 aaPredicted RBP17.38■□□□□ 0.37
NICN1-202ENST00000422593 CNTROBQ8N137 903 aa17.38■□□□□ 0.37
NICN1-202ENST00000422593 RIPK4P57078 832 aa17.37■□□□□ 0.37
NICN1-202ENST00000422593 LARGE2Q8N3Y3 721 aa17.37■□□□□ 0.37
NICN1-202ENST00000422593 NLRP3Q96P20 1036 aa17.37■□□□□ 0.37
NICN1-202ENST00000422593 CRAMP1Q96RY5 1269 aa17.37■□□□□ 0.37
NICN1-202ENST00000422593 LAMB2P55268 1798 aa17.37■□□□□ 0.37
NICN1-202ENST00000422593 ANKRD36CQ5JPF3 1778 aa17.36■□□□□ 0.37
NICN1-202ENST00000422593 TRPM7Q96QT4 1865 aa17.36■□□□□ 0.37
NICN1-202ENST00000422593 PPEF1O14829 653 aaPredicted RBP17.36■□□□□ 0.37
NICN1-202ENST00000422593 NTSR2O95665 410 aa17.36■□□□□ 0.37
NICN1-202ENST00000422593 LMOD1P29536 600 aaPredicted RBP17.36■□□□□ 0.37
NICN1-202ENST00000422593 VEGFBP49765 207 aa17.36■□□□□ 0.37
NICN1-202ENST00000422593 GRIPAP1Q4V328 841 aa17.36■□□□□ 0.37
NICN1-202ENST00000422593 TMX4Q9H1E5 349 aaPredicted RBP17.36■□□□□ 0.37
NICN1-202ENST00000422593 ERBB4Q15303 1308 aa17.36■□□□□ 0.37
NICN1-202ENST00000422593 IBTKQ9P2D0 1353 aaPredicted RBP17.36■□□□□ 0.37
NICN1-202ENST00000422593 SNED1Q8TER0 1413 aa17.36■□□□□ 0.37
NICN1-202ENST00000422593 TAF1P21675 1872 aa17.35■□□□□ 0.37
NICN1-202ENST00000422593 FOXN1O15353 648 aa17.35■□□□□ 0.37
NICN1-202ENST00000422593 ANXA1P04083 346 aa17.35■□□□□ 0.37
NICN1-202ENST00000422593 PARP10Q53GL7 1025 aa17.35■□□□□ 0.37
NICN1-202ENST00000422593 C3orf67Q6ZVT6 689 aa17.35■□□□□ 0.37
NICN1-202ENST00000422593 RIC1Q4ADV7 1423 aa17.35■□□□□ 0.37
NICN1-202ENST00000422593 COL4A5P29400 1685 aa17.35■□□□□ 0.37
NICN1-202ENST00000422593 LTBP1Q14766 1721 aa17.34■□□□□ 0.37
NICN1-202ENST00000422593 DEFB115Q30KQ5 88 aa17.34■□□□□ 0.37
NICN1-202ENST00000422593 SLC51AQ86UW1 340 aa17.34■□□□□ 0.37
NICN1-202ENST00000422593 NECTIN2Q92692 538 aa17.34■□□□□ 0.37
NICN1-202ENST00000422593 AIDAQ96BJ3 306 aa17.34■□□□□ 0.37
NICN1-202ENST00000422593 UTP14AQ9BVJ6 771 aaKnown RBP17.34■□□□□ 0.37
NICN1-202ENST00000422593 EPS15P42566 896 aa17.33■□□□□ 0.36
NICN1-202ENST00000422593 AIMP1Q12904 312 aaKnown RBP17.33■□□□□ 0.36
NICN1-202ENST00000422593 PDIA6Q15084 440 aa17.33■□□□□ 0.36
NICN1-202ENST00000422593 NIM1KQ8IY84 436 aa17.33■□□□□ 0.36
NICN1-202ENST00000422593 PPIP5K2O43314 1243 aa17.32■□□□□ 0.36
NICN1-202ENST00000422593 PROSER3Q2NL68 480 aa17.32■□□□□ 0.36
NICN1-202ENST00000422593 ABT1Q9ULW3 272 aaKnown RBP17.32■□□□□ 0.36
NICN1-202ENST00000422593 TMPOP42166 694 aaKnown RBP17.31■□□□□ 0.36
NICN1-202ENST00000422593 NEUROD2Q15784 382 aa17.31■□□□□ 0.36
NICN1-202ENST00000422593 AOC3Q16853 763 aa17.31■□□□□ 0.36
NICN1-202ENST00000422593 SLC10A5Q5PT55 438 aa17.31■□□□□ 0.36
NICN1-202ENST00000422593 COPS6Q7L5N1 327 aa17.31■□□□□ 0.36
NICN1-202ENST00000422593 LRP10Q7Z4F1 713 aa17.31■□□□□ 0.36
NICN1-202ENST00000422593 BABAM1Q9NWV8 329 aa17.31■□□□□ 0.36
NICN1-202ENST00000422593 CTCFP49711 727 aaPredicted RBP17.3■□□□□ 0.36
NICN1-202ENST00000422593 SCNN1DP51172 638 aa17.3■□□□□ 0.36
NICN1-202ENST00000422593 LMOD3Q0VAK6 560 aa17.3■□□□□ 0.36
NICN1-202ENST00000422593 RALBP1Q15311 655 aa17.3■□□□□ 0.36
NICN1-202ENST00000422593 DDX21Q9NR30 783 aaKnown RBP eCLIP17.3■□□□□ 0.36
NICN1-202ENST00000422593 ATP6V0A2Q9Y487 856 aa17.3■□□□□ 0.36
NICN1-202ENST00000422593 ABCC4O15439 1325 aa17.29■□□□□ 0.36
NICN1-202ENST00000422593 WDR33Q9C0J8 1336 aaKnown RBP17.29■□□□□ 0.36
NICN1-202ENST00000422593 RASSF10A6NK89 507 aa17.29■□□□□ 0.36
NICN1-202ENST00000422593 HCLS1P14317 486 aaPredicted RBP17.29■□□□□ 0.36
NICN1-202ENST00000422593 FMR1Q06787 632 aaKnown RBP eCLIP17.29■□□□□ 0.36
NICN1-202ENST00000422593 HSP90AB3PQ58FF7 597 aa17.29■□□□□ 0.36
NICN1-202ENST00000422593 USP50Q70EL3 339 aaPredicted RBP17.29■□□□□ 0.36
NICN1-202ENST00000422593 SUPT20HQ8NEM7 779 aa17.29■□□□□ 0.36
NICN1-202ENST00000422593 XAGE3Q8WTP9 111 aa17.29■□□□□ 0.36
NICN1-202ENST00000422593 PRDM10Q9NQV6 1147 aa17.29■□□□□ 0.36
NICN1-202ENST00000422593 LAS1LQ9Y4W2 734 aaKnown RBP17.29■□□□□ 0.36
NICN1-202ENST00000422593 CCDC146Q8IYE0 955 aa17.28■□□□□ 0.36
NICN1-202ENST00000422593 VPS33BQ9H267 617 aa17.28■□□□□ 0.36
NICN1-202ENST00000422593 WBP1LQ9NX94 342 aa17.28■□□□□ 0.36
NICN1-202ENST00000422593 TRMT112Q9UI30 125 aaKnown RBP17.28■□□□□ 0.36
NICN1-202ENST00000422593 BBOX1O75936 387 aa17.27■□□□□ 0.36
NICN1-202ENST00000422593 LBX1P52954 281 aa17.27■□□□□ 0.36
NICN1-202ENST00000422593 TCIRG1Q13488 830 aa17.27■□□□□ 0.36
NICN1-202ENST00000422593 DPP8Q6V1X1 898 aaPredicted RBP17.27■□□□□ 0.36
NICN1-202ENST00000422593 PAXIP1Q6ZW49 1069 aaPredicted RBP17.27■□□□□ 0.36
NICN1-202ENST00000422593 DDX46Q7L014 1031 aaKnown RBP17.27■□□□□ 0.36
NICN1-202ENST00000422593 NLRP10Q86W26 655 aa17.27■□□□□ 0.36
NICN1-202ENST00000422593 SP8Q8IXZ3 490 aa17.27■□□□□ 0.36
NICN1-202ENST00000422593 MPNDQ8N594 471 aa17.27■□□□□ 0.36
NICN1-202ENST00000422593 ZNF428Q96B54 188 aa17.27■□□□□ 0.36
NICN1-202ENST00000422593 ZNRF3Q9ULT6 936 aa17.27■□□□□ 0.36
NICN1-202ENST00000422593 CXCL9Q07325 125 aa17.26■□□□□ 0.35
NICN1-202ENST00000422593 GRM1Q13255 1194 aa17.26■□□□□ 0.35
NICN1-202ENST00000422593 KRT24Q2M2I5 525 aa17.26■□□□□ 0.35
NICN1-202ENST00000422593 POLR2AP24928 1970 aaKnown RBP17.26■□□□□ 0.35
NICN1-202ENST00000422593 TRAF5O00463 557 aa17.25■□□□□ 0.35
NICN1-202ENST00000422593 MAP2K1Q02750 393 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms