RNA–Protein interactions for RNA: ENST00000421582.2

CCDC107-205, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 1,324 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-205ENST00000421582 AIMP1Q12904 312 aaKnown RBP28.87■■■□□ 2.21
CCDC107-205ENST00000421582 SMC1BQ8NDV3 1235 aa28.87■■■□□ 2.21
CCDC107-205ENST00000421582 DDNO94850 711 aaPredicted RBP28.86■■■□□ 2.21
CCDC107-205ENST00000421582 DDX21Q9NR30 783 aaKnown RBP eCLIP28.86■■■□□ 2.21
CCDC107-205ENST00000421582 CHPF2Q9P2E5 772 aa28.86■■■□□ 2.21
CCDC107-205ENST00000421582 APAF1O14727 1248 aa28.85■■■□□ 2.21
CCDC107-205ENST00000421582 PARP10Q53GL7 1025 aa28.85■■■□□ 2.21
CCDC107-205ENST00000421582 RPGRQ92834 1020 aaKnown RBP28.85■■■□□ 2.21
CCDC107-205ENST00000421582 CFAP44Q96MT7 982 aa28.85■■■□□ 2.21
CCDC107-205ENST00000421582 HOXA10P31260 410 aaPredicted RBP28.84■■■□□ 2.21
CCDC107-205ENST00000421582 PPP1R42Q7Z4L9 355 aa28.84■■■□□ 2.21
CCDC107-205ENST00000421582 RTKN2Q8IZC4 609 aa28.84■■■□□ 2.21
CCDC107-205ENST00000421582 DNAJC5GQ8N7S2 189 aa28.84■■■□□ 2.21
CCDC107-205ENST00000421582 MBIPQ9NS73 344 aa28.84■■■□□ 2.21
CCDC107-205ENST00000421582 HDGFL1Q5TGJ6 251 aa28.83■■■□□ 2.21
CCDC107-205ENST00000421582 CCDC184Q52MB2 194 aa28.82■■■□□ 2.2
CCDC107-205ENST00000421582 UTP14AQ9BVJ6 771 aaKnown RBP28.82■■■□□ 2.2
CCDC107-205ENST00000421582 ZNF541Q9H0D2 1346 aa28.82■■■□□ 2.2
CCDC107-205ENST00000421582 COL4A5P29400 1685 aa28.8■■■□□ 2.2
CCDC107-205ENST00000421582 HOXB7P09629 217 aa28.8■■■□□ 2.2
CCDC107-205ENST00000421582 NLRP10Q86W26 655 aa28.8■■■□□ 2.2
CCDC107-205ENST00000421582 SYNE4Q8N205 404 aa28.8■■■□□ 2.2
CCDC107-205ENST00000421582 ZNF428Q96B54 188 aa28.8■■■□□ 2.2
CCDC107-205ENST00000421582 LAMB2P55268 1798 aa28.8■■■□□ 2.2
CCDC107-205ENST00000421582 ZNF853P0CG23 659 aa28.79■■■□□ 2.2
CCDC107-205ENST00000421582 DUSP27Q5VZP5 1158 aa28.79■■■□□ 2.2
CCDC107-205ENST00000421582 IARSP41252 1262 aaKnown RBP28.78■■■□□ 2.2
CCDC107-205ENST00000421582 TCIRG1Q13488 830 aa28.78■■■□□ 2.2
CCDC107-205ENST00000421582 HSP90AB3PQ58FF7 597 aa28.78■■■□□ 2.2
CCDC107-205ENST00000421582 SLC10A5Q5PT55 438 aa28.78■■■□□ 2.2
CCDC107-205ENST00000421582 RBM17Q96I25 401 aaKnown RBP28.78■■■□□ 2.2
CCDC107-205ENST00000421582 CRAMP1Q96RY5 1269 aa28.78■■■□□ 2.2
CCDC107-205ENST00000421582 PPEF1O14829 653 aaPredicted RBP28.77■■■□□ 2.2
CCDC107-205ENST00000421582 POTEIP0CG38 1075 aa28.77■■■□□ 2.2
CCDC107-205ENST00000421582 POTEJP0CG39 1038 aa28.77■■■□□ 2.2
CCDC107-205ENST00000421582 PSMD1Q99460 953 aa28.77■■■□□ 2.2
CCDC107-205ENST00000421582 TCERG1O14776 1098 aaKnown RBP28.76■■■□□ 2.19
CCDC107-205ENST00000421582 NLRP3Q96P20 1036 aa28.76■■■□□ 2.19
CCDC107-205ENST00000421582 HCLS1P14317 486 aaPredicted RBP28.75■■■□□ 2.19
CCDC107-205ENST00000421582 IFT57Q9NWB7 429 aa28.75■■■□□ 2.19
CCDC107-205ENST00000421582 DBF4Q9UBU7 674 aaPredicted RBP28.75■■■□□ 2.19
CCDC107-205ENST00000421582 RNF123Q5XPI4 1314 aa28.75■■■□□ 2.19
CCDC107-205ENST00000421582 CC2D2BQ6DHV5 1058 aa28.74■■■□□ 2.19
CCDC107-205ENST00000421582 L3MBTL3Q96JM7 780 aaPredicted RBP28.74■■■□□ 2.19
CCDC107-205ENST00000421582 ABCC4O15439 1325 aa28.74■■■□□ 2.19
CCDC107-205ENST00000421582 PLBD2Q8NHP8 589 aa28.73■■■□□ 2.19
CCDC107-205ENST00000421582 TRMT112Q9UI30 125 aaKnown RBP28.73■■■□□ 2.19
CCDC107-205ENST00000421582 SCN4AP35499 1836 aa28.73■■■□□ 2.19
CCDC107-205ENST00000421582 FZD9O00144 591 aa28.72■■■□□ 2.19
CCDC107-205ENST00000421582 PCNTO95613 3336 aa28.71■■■□□ 2.19
CCDC107-205ENST00000421582 GNAI1P63096 354 aa28.71■■■□□ 2.19
CCDC107-205ENST00000421582 ANKRD13DQ6ZTN6 518 aa28.71■■■□□ 2.19
CCDC107-205ENST00000421582 KLRG1Q96E93 195 aa28.71■■■□□ 2.19
CCDC107-205ENST00000421582 SH3TC1Q8TE82 1336 aa28.71■■■□□ 2.19
CCDC107-205ENST00000421582 DDX60Q8IY21 1712 aaKnown RBP28.71■■■□□ 2.19
CCDC107-205ENST00000421582 ELL2O00472 640 aaPredicted RBP28.7■■■□□ 2.19
CCDC107-205ENST00000421582 ATP5J2-PTCD1G3V325 749 aa28.69■■■□□ 2.18
CCDC107-205ENST00000421582 ISCA1Q9BUE6 129 aa28.69■■■□□ 2.18
CCDC107-205ENST00000421582 TAF1DQ9H5J8 278 aaPredicted RBP28.69■■■□□ 2.18
CCDC107-205ENST00000421582 HYPKQ9NX55 129 aa28.69■■■□□ 2.18
CCDC107-205ENST00000421582 IQCA1LA6NCM1 817 aa28.69■■■□□ 2.18
CCDC107-205ENST00000421582 ZEB1P37275 1124 aaPredicted RBP28.69■■■□□ 2.18
CCDC107-205ENST00000421582 CALD1Q05682 793 aaKnown RBP28.69■■■□□ 2.18
CCDC107-205ENST00000421582 CHADLQ6NUI6 762 aa28.69■■■□□ 2.18
CCDC107-205ENST00000421582 C8orf58Q8NAV2 365 aa28.69■■■□□ 2.18
CCDC107-205ENST00000421582 ATP6V0A2Q9Y487 856 aa28.69■■■□□ 2.18
CCDC107-205ENST00000421582 TAF1P21675 1872 aa28.67■■■□□ 2.18
CCDC107-205ENST00000421582 JDP2Q8WYK2 163 aa28.67■■■□□ 2.18
CCDC107-205ENST00000421582 PHAXQ9H814 394 aaKnown RBP28.67■■■□□ 2.18
CCDC107-205ENST00000421582 GRIPAP1Q4V328 841 aa28.66■■■□□ 2.18
CCDC107-205ENST00000421582 ADAMTSL1Q8N6G6 1762 aa28.65■■■□□ 2.18
CCDC107-205ENST00000421582 COL4A1P02462 1669 aa28.65■■■□□ 2.18
CCDC107-205ENST00000421582 LARGE2Q8N3Y3 721 aa28.65■■■□□ 2.18
CCDC107-205ENST00000421582 FAM89AQ96GI7 184 aa28.65■■■□□ 2.18
CCDC107-205ENST00000421582 HACL1Q9UJ83 578 aa28.65■■■□□ 2.18
CCDC107-205ENST00000421582 LTBP1Q14766 1721 aa28.64■■■□□ 2.18
CCDC107-205ENST00000421582 GPC2Q8N158 579 aa28.64■■■□□ 2.17
CCDC107-205ENST00000421582 LDHDQ86WU2 507 aa28.63■■■□□ 2.17
CCDC107-205ENST00000421582 TSPYL6Q8N831 410 aa28.63■■■□□ 2.17
CCDC107-205ENST00000421582 JMYQ8N9B5 988 aa28.63■■■□□ 2.17
CCDC107-205ENST00000421582 GRAPQ13588 217 aa28.62■■■□□ 2.17
CCDC107-205ENST00000421582 AOC3Q16853 763 aa28.62■■■□□ 2.17
CCDC107-205ENST00000421582 EAPPQ56P03 285 aaPredicted RBP28.62■■■□□ 2.17
CCDC107-205ENST00000421582 RTL5Q5HYW3 569 aaPredicted RBP28.62■■■□□ 2.17
CCDC107-205ENST00000421582 DDX46Q7L014 1031 aaKnown RBP28.62■■■□□ 2.17
CCDC107-205ENST00000421582 GRAPLQ8TC17 118 aaPredicted RBP28.62■■■□□ 2.17
CCDC107-205ENST00000421582 TSR2Q969E8 191 aaKnown RBP28.62■■■□□ 2.17
CCDC107-205ENST00000421582 GJA3Q9Y6H8 435 aa28.62■■■□□ 2.17
CCDC107-205ENST00000421582 PPIP5K2O43314 1243 aa28.61■■■□□ 2.17
CCDC107-205ENST00000421582 BBOX1O75936 387 aa28.61■■■□□ 2.17
CCDC107-205ENST00000421582 EPHX2P34913 555 aa28.61■■■□□ 2.17
CCDC107-205ENST00000421582 EIF6P56537 245 aaKnown RBP28.61■■■□□ 2.17
CCDC107-205ENST00000421582 LRRC37AA6NMS7 1700 aa28.61■■■□□ 2.17
CCDC107-205ENST00000421582 DUOX1Q9NRD9 1551 aa28.6■■■□□ 2.17
CCDC107-205ENST00000421582 ZNF316A6NFI3 1004 aaPredicted RBP28.6■■■□□ 2.17
CCDC107-205ENST00000421582 GOLGA2Q08379 1002 aa28.6■■■□□ 2.17
CCDC107-205ENST00000421582 RIC3Q7Z5B4 369 aa28.6■■■□□ 2.17
CCDC107-205ENST00000421582 SP8Q8IXZ3 490 aa28.6■■■□□ 2.17
CCDC107-205ENST00000421582 RTFDC1Q9BY42 306 aaPredicted RBP28.6■■■□□ 2.17
CCDC107-205ENST00000421582 NIM1KQ8IY84 436 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms