RNA–Protein interactions for RNA: ENST00000421434.5

SCRN1-204, Transcript of secernin 1, humanhuman

TSL 3

Gene SCRN1, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-204ENST00000421434 UBN2Q6ZU65 1347 aa12.38□□□□□ -0.43
SCRN1-204ENST00000421434 EIF2S2P20042 333 aaKnown RBP12.38□□□□□ -0.43
SCRN1-204ENST00000421434 EIF6P56537 245 aaKnown RBP12.38□□□□□ -0.43
SCRN1-204ENST00000421434 PNMA8AQ86V59 439 aaPredicted RBP12.38□□□□□ -0.43
SCRN1-204ENST00000421434 GPC2Q8N158 579 aa12.38□□□□□ -0.43
SCRN1-204ENST00000421434 LARGE2Q8N3Y3 721 aa12.38□□□□□ -0.43
SCRN1-204ENST00000421434 PSMD1Q99460 953 aa12.38□□□□□ -0.43
SCRN1-204ENST00000421434 CNTNAP1P78357 1384 aa12.38□□□□□ -0.43
SCRN1-204ENST00000421434 HOXA10P31260 410 aaPredicted RBP12.37□□□□□ -0.43
SCRN1-204ENST00000421434 CC2D2BQ6DHV5 1058 aa12.37□□□□□ -0.43
SCRN1-204ENST00000421434 C3orf67Q6ZVT6 689 aa12.37□□□□□ -0.43
SCRN1-204ENST00000421434 ZNF34Q8IZ26 560 aa12.37□□□□□ -0.43
SCRN1-204ENST00000421434 RBM17Q96I25 401 aaKnown RBP12.37□□□□□ -0.43
SCRN1-204ENST00000421434 TSPYL4Q9UJ04 414 aa12.37□□□□□ -0.43
SCRN1-204ENST00000421434 MAPK8IP3Q9UPT6 1336 aa12.37□□□□□ -0.43
SCRN1-204ENST00000421434 ANXA1P04083 346 aa12.36□□□□□ -0.43
SCRN1-204ENST00000421434 EPS15P42566 896 aa12.36□□□□□ -0.43
SCRN1-204ENST00000421434 DEFB115Q30KQ5 88 aa12.36□□□□□ -0.43
SCRN1-204ENST00000421434 GIGYF2Q6Y7W6 1299 aaKnown RBP12.36□□□□□ -0.43
SCRN1-204ENST00000421434 AIDAQ96BJ3 306 aa12.36□□□□□ -0.43
SCRN1-204ENST00000421434 PNNQ9H307 717 aaKnown RBP12.36□□□□□ -0.43
SCRN1-204ENST00000421434 ARFGEF2Q9Y6D5 1785 aa12.35□□□□□ -0.43
SCRN1-204ENST00000421434 PPEF1O14829 653 aaPredicted RBP12.35□□□□□ -0.43
SCRN1-204ENST00000421434 NTSR2O95665 410 aa12.35□□□□□ -0.43
SCRN1-204ENST00000421434 LMOD1P29536 600 aaPredicted RBP12.35□□□□□ -0.43
SCRN1-204ENST00000421434 RIPK4P57078 832 aa12.35□□□□□ -0.43
SCRN1-204ENST00000421434 FMR1Q06787 632 aaKnown RBP eCLIP12.35□□□□□ -0.43
SCRN1-204ENST00000421434 PPP1R42Q7Z4L9 355 aa12.35□□□□□ -0.43
SCRN1-204ENST00000421434 NECTIN2Q92692 538 aa12.35□□□□□ -0.43
SCRN1-204ENST00000421434 NLRP3Q96P20 1036 aa12.35□□□□□ -0.43
SCRN1-204ENST00000421434 CRAMP1Q96RY5 1269 aa12.35□□□□□ -0.43
SCRN1-204ENST00000421434 TMX4Q9H1E5 349 aaPredicted RBP12.35□□□□□ -0.43
SCRN1-204ENST00000421434 ABT1Q9ULW3 272 aaKnown RBP12.35□□□□□ -0.43
SCRN1-204ENST00000421434 SCN4AP35499 1836 aa12.34□□□□□ -0.43
SCRN1-204ENST00000421434 AIMP1Q12904 312 aaKnown RBP12.34□□□□□ -0.43
SCRN1-204ENST00000421434 PROSER3Q2NL68 480 aa12.34□□□□□ -0.43
SCRN1-204ENST00000421434 UTP14AQ9BVJ6 771 aaKnown RBP12.34□□□□□ -0.43
SCRN1-204ENST00000421434 PPIP5K2O43314 1243 aa12.33□□□□□ -0.44
SCRN1-204ENST00000421434 CTCFP49711 727 aaPredicted RBP12.33□□□□□ -0.44
SCRN1-204ENST00000421434 SCNN1DP51172 638 aa12.33□□□□□ -0.44
SCRN1-204ENST00000421434 LBX1P52954 281 aa12.33□□□□□ -0.44
SCRN1-204ENST00000421434 GRM1Q13255 1194 aa12.33□□□□□ -0.44
SCRN1-204ENST00000421434 PDIA6Q15084 440 aa12.33□□□□□ -0.44
SCRN1-204ENST00000421434 AOC3Q16853 763 aa12.33□□□□□ -0.44
SCRN1-204ENST00000421434 GRIPAP1Q4V328 841 aa12.33□□□□□ -0.44
SCRN1-204ENST00000421434 PARP10Q53GL7 1025 aa12.33□□□□□ -0.44
SCRN1-204ENST00000421434 NIM1KQ8IY84 436 aa12.33□□□□□ -0.44
SCRN1-204ENST00000421434 ZNF428Q96B54 188 aa12.33□□□□□ -0.44
SCRN1-204ENST00000421434 DDX21Q9NR30 783 aaKnown RBP eCLIP12.33□□□□□ -0.44
SCRN1-204ENST00000421434 WBP1LQ9NX94 342 aa12.33□□□□□ -0.44
SCRN1-204ENST00000421434 SNED1Q8TER0 1413 aa12.33□□□□□ -0.44
SCRN1-204ENST00000421434 COL4A5P29400 1685 aa12.32□□□□□ -0.44
SCRN1-204ENST00000421434 RASSF10A6NK89 507 aa12.32□□□□□ -0.44
SCRN1-204ENST00000421434 TRAF5O00463 557 aa12.32□□□□□ -0.44
SCRN1-204ENST00000421434 HCLS1P14317 486 aaPredicted RBP12.32□□□□□ -0.44
SCRN1-204ENST00000421434 PAXIP1Q6ZW49 1069 aaPredicted RBP12.32□□□□□ -0.44
SCRN1-204ENST00000421434 COPS6Q7L5N1 327 aa12.32□□□□□ -0.44
SCRN1-204ENST00000421434 LRP10Q7Z4F1 713 aa12.32□□□□□ -0.44
SCRN1-204ENST00000421434 PRDM10Q9NQV6 1147 aa12.32□□□□□ -0.44
SCRN1-204ENST00000421434 ERBB4Q15303 1308 aa12.32□□□□□ -0.44
SCRN1-204ENST00000421434 WDR33Q9C0J8 1336 aaKnown RBP12.32□□□□□ -0.44
SCRN1-204ENST00000421434 NUP98P52948 1817 aa12.32□□□□□ -0.44
SCRN1-204ENST00000421434 NEUROD2Q15784 382 aa12.31□□□□□ -0.44
SCRN1-204ENST00000421434 SLC10A5Q5PT55 438 aa12.31□□□□□ -0.44
SCRN1-204ENST00000421434 XAGE3Q8WTP9 111 aa12.31□□□□□ -0.44
SCRN1-204ENST00000421434 ATP6V0A2Q9Y487 856 aa12.31□□□□□ -0.44
SCRN1-204ENST00000421434 DLG5Q8TDM6 1919 aa12.31□□□□□ -0.44
SCRN1-204ENST00000421434 IBTKQ9P2D0 1353 aaPredicted RBP12.3□□□□□ -0.44
SCRN1-204ENST00000421434 TMPOP42166 694 aaKnown RBP12.3□□□□□ -0.44
SCRN1-204ENST00000421434 CXCL9Q07325 125 aa12.3□□□□□ -0.44
SCRN1-204ENST00000421434 KRT24Q2M2I5 525 aa12.3□□□□□ -0.44
SCRN1-204ENST00000421434 CST9Q5W186 159 aa12.3□□□□□ -0.44
SCRN1-204ENST00000421434 USP50Q70EL3 339 aaPredicted RBP12.3□□□□□ -0.44
SCRN1-204ENST00000421434 TRMT112Q9UI30 125 aaKnown RBP12.3□□□□□ -0.44
SCRN1-204ENST00000421434 LAS1LQ9Y4W2 734 aaKnown RBP12.3□□□□□ -0.44
SCRN1-204ENST00000421434 ABCC4O15439 1325 aa12.3□□□□□ -0.44
SCRN1-204ENST00000421434 KDM3BQ7LBC6 1761 aa12.3□□□□□ -0.44
SCRN1-204ENST00000421434 LAMB4A4D0S4 1761 aa12.29□□□□□ -0.44
SCRN1-204ENST00000421434 BBOX1O75936 387 aa12.29□□□□□ -0.44
SCRN1-204ENST00000421434 MAP2K1Q02750 393 aaPredicted RBP12.29□□□□□ -0.44
SCRN1-204ENST00000421434 CYP4F22Q6NT55 531 aa12.29□□□□□ -0.44
SCRN1-204ENST00000421434 DPP8Q6V1X1 898 aaPredicted RBP12.29□□□□□ -0.44
SCRN1-204ENST00000421434 NLRP10Q86W26 655 aa12.29□□□□□ -0.44
SCRN1-204ENST00000421434 SP8Q8IXZ3 490 aa12.29□□□□□ -0.44
SCRN1-204ENST00000421434 CCDC146Q8IYE0 955 aa12.29□□□□□ -0.44
SCRN1-204ENST00000421434 MPNDQ8N594 471 aa12.29□□□□□ -0.44
SCRN1-204ENST00000421434 GPRC5DQ9NZD1 345 aa12.29□□□□□ -0.44
SCRN1-204ENST00000421434 ZNRF3Q9ULT6 936 aa12.29□□□□□ -0.44
SCRN1-204ENST00000421434 RIC1Q4ADV7 1423 aa12.28□□□□□ -0.44
SCRN1-204ENST00000421434 RAD17O75943 681 aa12.28□□□□□ -0.44
SCRN1-204ENST00000421434 HSPA8P11142 646 aaKnown RBP12.28□□□□□ -0.44
SCRN1-204ENST00000421434 GMPSP49915 693 aaPredicted RBP12.28□□□□□ -0.44
SCRN1-204ENST00000421434 TCIRG1Q13488 830 aa12.28□□□□□ -0.44
SCRN1-204ENST00000421434 HSP90AB3PQ58FF7 597 aa12.28□□□□□ -0.44
SCRN1-204ENST00000421434 DDX46Q7L014 1031 aaKnown RBP12.28□□□□□ -0.44
SCRN1-204ENST00000421434 SUPT20HQ8NEM7 779 aa12.28□□□□□ -0.44
SCRN1-204ENST00000421434 CAPNS2Q96L46 248 aa12.28□□□□□ -0.44
SCRN1-204ENST00000421434 GPR101Q96P66 508 aaPredicted RBP12.28□□□□□ -0.44
SCRN1-204ENST00000421434 ADARB2Q9NS39 739 aaKnown RBP12.28□□□□□ -0.44
SCRN1-204ENST00000421434 ADAMTSL1Q8N6G6 1762 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms