RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 GRIP2Q9C0E4 1043 aa7.5□□□□□ -1.21
PTP4A1P1-201ENST00000420539 CAPN10Q9HC96 672 aa7.5□□□□□ -1.21
PTP4A1P1-201ENST00000420539 TTLL8A6PVC2 850 aa7.49□□□□□ -1.21
PTP4A1P1-201ENST00000420539 H3BRB1 525 aa7.49□□□□□ -1.21
PTP4A1P1-201ENST00000420539 GPC1P35052 558 aa7.49□□□□□ -1.21
PTP4A1P1-201ENST00000420539 NOS2P35228 1153 aa7.49□□□□□ -1.21
PTP4A1P1-201ENST00000420539 C4orf17Q53FE4 359 aa7.49□□□□□ -1.21
PTP4A1P1-201ENST00000420539 ZCRB1Q8TBF4 217 aaKnown RBP7.49□□□□□ -1.21
PTP4A1P1-201ENST00000420539 RNF217Q8TC41 542 aa7.49□□□□□ -1.21
PTP4A1P1-201ENST00000420539 ZFP42Q96MM3 310 aa7.49□□□□□ -1.21
PTP4A1P1-201ENST00000420539 SAP130Q9H0E3 1048 aa7.49□□□□□ -1.21
PTP4A1P1-201ENST00000420539 TUT1Q9H6E5 874 aaKnown RBP7.49□□□□□ -1.21
PTP4A1P1-201ENST00000420539 EGFL7Q9UHF1 273 aa7.49□□□□□ -1.21
PTP4A1P1-201ENST00000420539 DNMT3AQ9Y6K1 912 aaPredicted RBP7.49□□□□□ -1.21
PTP4A1P1-201ENST00000420539 EML1O00423 815 aa7.48□□□□□ -1.21
PTP4A1P1-201ENST00000420539 RBL2Q08999 1139 aa7.48□□□□□ -1.21
PTP4A1P1-201ENST00000420539 TEAD4Q15561 434 aa7.48□□□□□ -1.21
PTP4A1P1-201ENST00000420539 ZNF746Q6NUN9 644 aaPredicted RBP7.48□□□□□ -1.21
PTP4A1P1-201ENST00000420539 LYSMD3Q7Z3D4 306 aa7.48□□□□□ -1.21
PTP4A1P1-201ENST00000420539 JAZF1Q86VZ6 243 aa7.48□□□□□ -1.21
PTP4A1P1-201ENST00000420539 ZSCAN29Q8IWY8 852 aaPredicted RBP7.48□□□□□ -1.21
PTP4A1P1-201ENST00000420539 PMM1Q92871 262 aa7.48□□□□□ -1.21
PTP4A1P1-201ENST00000420539 CCDC136Q96JN2 1154 aa7.48□□□□□ -1.21
PTP4A1P1-201ENST00000420539 PLCD4Q9BRC7 762 aa7.48□□□□□ -1.21
PTP4A1P1-201ENST00000420539 TGIF2Q9GZN2 237 aa7.48□□□□□ -1.21
PTP4A1P1-201ENST00000420539 CCSER2Q9H7U1 834 aa7.48□□□□□ -1.21
PTP4A1P1-201ENST00000420539 DCTN4Q9UJW0 460 aa7.48□□□□□ -1.21
PTP4A1P1-201ENST00000420539 TXLNAP40222 546 aa7.47□□□□□ -1.21
PTP4A1P1-201ENST00000420539 SMCPP49901 116 aaPredicted RBP7.47□□□□□ -1.21
PTP4A1P1-201ENST00000420539 FAM50AQ14320 339 aaKnown RBP7.47□□□□□ -1.21
PTP4A1P1-201ENST00000420539 GLYCTKQ8IVS8 523 aa7.47□□□□□ -1.21
PTP4A1P1-201ENST00000420539 ZNF295-AS1Q8N0V1 137 aa7.47□□□□□ -1.21
PTP4A1P1-201ENST00000420539 SGSM3Q96HU1 749 aa7.47□□□□□ -1.21
PTP4A1P1-201ENST00000420539 PHACTR1Q9C0D0 580 aa7.47□□□□□ -1.21
PTP4A1P1-201ENST00000420539 UBA5Q9GZZ9 404 aa7.47□□□□□ -1.21
PTP4A1P1-201ENST00000420539 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.47□□□□□ -1.21
PTP4A1P1-201ENST00000420539 AAASQ9NRG9 546 aa7.47□□□□□ -1.21
PTP4A1P1-201ENST00000420539 DACH1Q9UI36 760 aa7.47□□□□□ -1.21
PTP4A1P1-201ENST00000420539 ICMTO60725 284 aa7.46□□□□□ -1.22
PTP4A1P1-201ENST00000420539 EIF3JO75822 258 aaKnown RBP7.46□□□□□ -1.22
PTP4A1P1-201ENST00000420539 RNF187Q5TA31 235 aaPredicted RBP7.46□□□□□ -1.22
PTP4A1P1-201ENST00000420539 C16orf46Q6P387 395 aa7.46□□□□□ -1.22
PTP4A1P1-201ENST00000420539 NBPF10Q6P3W6 841 aaKnown RBP7.46□□□□□ -1.22
PTP4A1P1-201ENST00000420539 ALDH16A1Q8IZ83 802 aa7.46□□□□□ -1.22
PTP4A1P1-201ENST00000420539 STAG2Q8N3U4 1231 aa7.46□□□□□ -1.22
PTP4A1P1-201ENST00000420539 TMEM87AQ8NBN3 555 aa7.46□□□□□ -1.22
PTP4A1P1-201ENST00000420539 EVI5LQ96CN4 794 aa7.46□□□□□ -1.22
PTP4A1P1-201ENST00000420539 GMLQ99445 158 aa7.46□□□□□ -1.22
PTP4A1P1-201ENST00000420539 QTRT2Q9H974 415 aaKnown RBP7.46□□□□□ -1.22
PTP4A1P1-201ENST00000420539 ATP13A2Q9NQ11 1180 aa7.46□□□□□ -1.22
PTP4A1P1-201ENST00000420539 PRDM10Q9NQV6 1147 aa7.46□□□□□ -1.22
PTP4A1P1-201ENST00000420539 TERF2IPQ9NYB0 399 aa7.46□□□□□ -1.22
PTP4A1P1-201ENST00000420539 DMGDHQ9UI17 866 aaKnown RBP7.46□□□□□ -1.22
PTP4A1P1-201ENST00000420539 LAS1LQ9Y4W2 734 aaKnown RBP7.46□□□□□ -1.22
PTP4A1P1-201ENST00000420539 COL4A3BPQ9Y5P4 624 aa7.46□□□□□ -1.22
PTP4A1P1-201ENST00000420539 SOS2Q07890 1332 aaPredicted RBP7.46□□□□□ -1.22
PTP4A1P1-201ENST00000420539 SOBPA7XYQ1 873 aa7.45□□□□□ -1.22
PTP4A1P1-201ENST00000420539 U2SURPO15042 1029 aaKnown RBP7.45□□□□□ -1.22
PTP4A1P1-201ENST00000420539 CREB3O43889 395 aa7.45□□□□□ -1.22
PTP4A1P1-201ENST00000420539 HSD3B2P26439 372 aa7.45□□□□□ -1.22
PTP4A1P1-201ENST00000420539 FGD1P98174 961 aa7.45□□□□□ -1.22
PTP4A1P1-201ENST00000420539 COX20Q5RI15 118 aa7.45□□□□□ -1.22
PTP4A1P1-201ENST00000420539 HELQQ8TDG4 1101 aa7.45□□□□□ -1.22
PTP4A1P1-201ENST00000420539 COL26A1Q96A83 441 aa7.45□□□□□ -1.22
PTP4A1P1-201ENST00000420539 ACBD3Q9H3P7 528 aa7.45□□□□□ -1.22
PTP4A1P1-201ENST00000420539 GABBR1Q9UBS5 961 aa7.45□□□□□ -1.22
PTP4A1P1-201ENST00000420539 SPATA31C2B4DYI2 1134 aa7.44□□□□□ -1.22
PTP4A1P1-201ENST00000420539 MAN1A2O60476 641 aa7.44□□□□□ -1.22
PTP4A1P1-201ENST00000420539 DNAJA1P31689 397 aaKnown RBP7.44□□□□□ -1.22
PTP4A1P1-201ENST00000420539 NBPF1Q3BBV0 1214 aa7.44□□□□□ -1.22
PTP4A1P1-201ENST00000420539 PLEKHG6Q3KR16 790 aa7.44□□□□□ -1.22
PTP4A1P1-201ENST00000420539 FOXD4L6Q3SYB3 417 aaPredicted RBP7.44□□□□□ -1.22
PTP4A1P1-201ENST00000420539 FOXD4L3Q6VB84 417 aaPredicted RBP7.44□□□□□ -1.22
PTP4A1P1-201ENST00000420539 CRIPAKQ8N1N5 446 aa7.44□□□□□ -1.22
PTP4A1P1-201ENST00000420539 SPOCK3Q9BQ16 436 aa7.44□□□□□ -1.22
PTP4A1P1-201ENST00000420539 OSBPL2Q9H1P3 480 aa7.44□□□□□ -1.22
PTP4A1P1-201ENST00000420539 KLK14Q9P0G3 267 aa7.44□□□□□ -1.22
PTP4A1P1-201ENST00000420539 DNMT3LQ9UJW3 386 aa7.44□□□□□ -1.22
PTP4A1P1-201ENST00000420539 HMGB1P1B2RPK0 211 aaPredicted RBP7.43□□□□□ -1.22
PTP4A1P1-201ENST00000420539 PPFIA4O75335 1185 aa7.43□□□□□ -1.22
PTP4A1P1-201ENST00000420539 MPSTP25325 297 aa7.43□□□□□ -1.22
PTP4A1P1-201ENST00000420539 TNNI2P48788 182 aa7.43□□□□□ -1.22
PTP4A1P1-201ENST00000420539 FANCCQ00597 558 aa7.43□□□□□ -1.22
PTP4A1P1-201ENST00000420539 FKBP4Q02790 459 aaKnown RBP eCLIP7.43□□□□□ -1.22
PTP4A1P1-201ENST00000420539 DGKZQ13574 1117 aa7.43□□□□□ -1.22
PTP4A1P1-201ENST00000420539 ECM1Q16610 540 aa7.43□□□□□ -1.22
PTP4A1P1-201ENST00000420539 SOGA3Q5TF21 947 aa7.43□□□□□ -1.22
PTP4A1P1-201ENST00000420539 BICDL1Q6ZP65 573 aa7.43□□□□□ -1.22
PTP4A1P1-201ENST00000420539 RGL4Q8IZJ4 473 aa7.43□□□□□ -1.22
PTP4A1P1-201ENST00000420539 RHPN1Q8TCX5 695 aa7.43□□□□□ -1.22
PTP4A1P1-201ENST00000420539 RNF34Q969K3 372 aa7.43□□□□□ -1.22
PTP4A1P1-201ENST00000420539 IRF2BPLQ9H1B7 796 aa7.43□□□□□ -1.22
PTP4A1P1-201ENST00000420539 GPAMQ9HCL2 828 aa7.43□□□□□ -1.22
PTP4A1P1-201ENST00000420539 PCDH12Q9NPG4 1184 aa7.43□□□□□ -1.22
PTP4A1P1-201ENST00000420539 TIMMDC1Q9NPL8 285 aa7.43□□□□□ -1.22
PTP4A1P1-201ENST00000420539 LRFN2Q9ULH4 789 aa7.43□□□□□ -1.22
PTP4A1P1-201ENST00000420539 LCE2BO14633 110 aa7.42□□□□□ -1.22
PTP4A1P1-201ENST00000420539 P4HBP07237 508 aaKnown RBP7.42□□□□□ -1.22
PTP4A1P1-201ENST00000420539 TATP17735 454 aaPredicted RBP7.42□□□□□ -1.22
PTP4A1P1-201ENST00000420539 HIRAP54198 1017 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms