RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 TECPR2O15040 1411 aa9.45□□□□□ -0.9
HMGXB4-202ENST00000418170 ADGRL3Q9HAR2 1447 aa9.45□□□□□ -0.9
HMGXB4-202ENST00000418170 GOLGA6L4A6NEF3 574 aa9.45□□□□□ -0.9
HMGXB4-202ENST00000418170 GOLGA6L19H0YKK7 550 aa9.45□□□□□ -0.9
HMGXB4-202ENST00000418170 NOP2P46087 812 aaKnown RBP9.45□□□□□ -0.9
HMGXB4-202ENST00000418170 SYT10Q6XYQ8 523 aa9.45□□□□□ -0.9
HMGXB4-202ENST00000418170 USP54Q70EL1 1684 aa9.44□□□□□ -0.9
HMGXB4-202ENST00000418170 SLC4A2P04920 1241 aa9.44□□□□□ -0.9
HMGXB4-202ENST00000418170 CHRM1P11229 460 aaPredicted RBP9.44□□□□□ -0.9
HMGXB4-202ENST00000418170 CPA1P15085 419 aa9.44□□□□□ -0.9
HMGXB4-202ENST00000418170 ARHGAP29Q52LW3 1261 aa9.44□□□□□ -0.9
HMGXB4-202ENST00000418170 FILIP1Q7Z7B0 1213 aa9.44□□□□□ -0.9
HMGXB4-202ENST00000418170 UBXN6Q9BZV1 441 aa9.44□□□□□ -0.9
HMGXB4-202ENST00000418170 PNMA6EA0A0J9YXQ4 647 aa9.44□□□□□ -0.9
HMGXB4-202ENST00000418170 SNW1Q13573 536 aaKnown RBP9.44□□□□□ -0.9
HMGXB4-202ENST00000418170 LARP1BQ659C4 914 aaKnown RBP9.44□□□□□ -0.9
HMGXB4-202ENST00000418170 KRBA2Q6ZNG9 492 aa9.44□□□□□ -0.9
HMGXB4-202ENST00000418170 CDC37L1Q7L3B6 337 aa9.44□□□□□ -0.9
HMGXB4-202ENST00000418170 LRRN4CLQ8ND94 238 aa9.44□□□□□ -0.9
HMGXB4-202ENST00000418170 DTNBO60941 627 aa9.44□□□□□ -0.9
HMGXB4-202ENST00000418170 NR1I2O75469 434 aa9.44□□□□□ -0.9
HMGXB4-202ENST00000418170 SLC4A10Q6U841 1118 aa9.44□□□□□ -0.9
HMGXB4-202ENST00000418170 TMCO3Q6UWJ1 677 aa9.44□□□□□ -0.9
HMGXB4-202ENST00000418170 SPATA32Q96LK8 384 aa9.44□□□□□ -0.9
HMGXB4-202ENST00000418170 ARGLU1Q9NWB6 273 aaPredicted RBP9.44□□□□□ -0.9
HMGXB4-202ENST00000418170 USP16Q9Y5T5 823 aa9.44□□□□□ -0.9
HMGXB4-202ENST00000418170 EMILIN1Q9Y6C2 1016 aa9.44□□□□□ -0.9
HMGXB4-202ENST00000418170 ATP8B2P98198 1209 aa9.43□□□□□ -0.9
HMGXB4-202ENST00000418170 FAM173BQ6P4H8 233 aa9.43□□□□□ -0.9
HMGXB4-202ENST00000418170 PDRG1Q9NUG6 133 aa9.43□□□□□ -0.9
HMGXB4-202ENST00000418170 CRYBG1Q9Y4K1 1723 aa9.43□□□□□ -0.9
HMGXB4-202ENST00000418170 MYO1CO00159 1063 aa9.43□□□□□ -0.9
HMGXB4-202ENST00000418170 POLR3GO15318 223 aaPredicted RBP9.43□□□□□ -0.9
HMGXB4-202ENST00000418170 ATP8B1O43520 1251 aa9.43□□□□□ -0.9
HMGXB4-202ENST00000418170 CTR9Q6PD62 1173 aa9.43□□□□□ -0.9
HMGXB4-202ENST00000418170 FERMT3Q86UX7 667 aa9.43□□□□□ -0.9
HMGXB4-202ENST00000418170 LEO1Q8WVC0 666 aaPredicted RBP9.43□□□□□ -0.9
HMGXB4-202ENST00000418170 GEMIN8Q9NWZ8 242 aaKnown RBP9.43□□□□□ -0.9
HMGXB4-202ENST00000418170 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.43□□□□□ -0.91e-7■■■□□ 16.7
HMGXB4-202ENST00000418170 LRRFIP2Q9Y608 721 aaKnown RBP9.43□□□□□ -0.9
HMGXB4-202ENST00000418170 MINK1Q8N4C8 1332 aaPredicted RBP9.43□□□□□ -0.9
HMGXB4-202ENST00000418170 F6X3S4 739 aa9.43□□□□□ -0.9
HMGXB4-202ENST00000418170 PDCP20941 246 aa9.43□□□□□ -0.9
HMGXB4-202ENST00000418170 ST5P78524 1137 aa9.43□□□□□ -0.9
HMGXB4-202ENST00000418170 GPS2Q13227 327 aa9.43□□□□□ -0.9
HMGXB4-202ENST00000418170 ME3Q16798 604 aa9.43□□□□□ -0.9
HMGXB4-202ENST00000418170 SMARCE1Q969G3 411 aa9.43□□□□□ -0.9
HMGXB4-202ENST00000418170 TM6SF1Q9BZW5 370 aa9.43□□□□□ -0.9
HMGXB4-202ENST00000418170 DHX16O60231 1041 aaKnown RBP9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 GSDMDP57764 484 aa9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 ZSCAN26Q16670 478 aa9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 ZSWIM6Q9HCJ5 1215 aa9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 TUBB4AP04350 444 aa9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 CASQ1P31415 396 aa9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 CABP1Q9NZU7 370 aa9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 STK26Q9P289 416 aa9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 ORC3Q9UBD5 711 aaPredicted RBP9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 PPP6R1Q9UPN7 881 aa9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 PTPRUQ92729 1446 aa9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 GNAI3P08754 354 aa9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 NUTM2DQ5VT03 806 aaPredicted RBP9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 E4F1Q66K89 784 aaPredicted RBP9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 C11orf57Q6ZUT1 292 aaPredicted RBP9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 PI4K2BQ8TCG2 481 aa9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 ZFP91Q96JP5 570 aaPredicted RBP9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 ATG3Q9NT62 314 aa9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 ITSN1Q15811 1721 aa9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 G2E3Q7L622 706 aa9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 PGBD1Q96JS3 809 aa9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 PPP1R13BQ96KQ4 1090 aa9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 JAKMIP1Q96N16 626 aaKnown RBP9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 CWC15Q9P013 229 aaKnown RBP9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 CYP46A1Q9Y6A2 500 aa9.42□□□□□ -0.9
HMGXB4-202ENST00000418170 ARHGEF10O15013 1369 aa9.41□□□□□ -0.9
HMGXB4-202ENST00000418170 METP08581 1390 aa9.41□□□□□ -0.9
HMGXB4-202ENST00000418170 PSDA5PKW4 1024 aaPredicted RBP9.41□□□□□ -0.9
HMGXB4-202ENST00000418170 KCNJ6P48051 423 aa9.41□□□□□ -0.9
HMGXB4-202ENST00000418170 ADCK5Q3MIX3 580 aa9.41□□□□□ -0.9
HMGXB4-202ENST00000418170 C10orf67Q8IYJ2 551 aa9.41□□□□□ -0.9
HMGXB4-202ENST00000418170 NECAB1Q8N987 351 aa9.41□□□□□ -0.9
HMGXB4-202ENST00000418170 CCDC191Q8NCU4 936 aa9.41□□□□□ -0.9
HMGXB4-202ENST00000418170 BICD2Q8TD16 824 aa9.41□□□□□ -0.9
HMGXB4-202ENST00000418170 OSBPL5Q9H0X9 879 aaPredicted RBP9.41□□□□□ -0.9
HMGXB4-202ENST00000418170 TFIP11Q9UBB9 837 aaKnown RBP9.41□□□□□ -0.9
HMGXB4-202ENST00000418170 TRIM66O15016 1216 aa9.41□□□□□ -0.9
HMGXB4-202ENST00000418170 STX1AQ16623 288 aa9.41□□□□□ -0.9
HMGXB4-202ENST00000418170 UBXN4Q92575 508 aa9.41□□□□□ -0.9
HMGXB4-202ENST00000418170 LCMT1Q9UIC8 334 aa9.41□□□□□ -0.9
HMGXB4-202ENST00000418170 ATP7BP35670 1465 aa9.41□□□□□ -0.9
HMGXB4-202ENST00000418170 STRCP1A6NGW2 1772 aa9.41□□□□□ -0.9
HMGXB4-202ENST00000418170 N4BP2Q86UW6 1770 aaPredicted RBP9.41□□□□□ -0.9
HMGXB4-202ENST00000418170 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.41□□□□□ -0.9
HMGXB4-202ENST00000418170 MAP4K4O95819 1239 aaPredicted RBP9.41□□□□□ -0.9
HMGXB4-202ENST00000418170 KCNB2Q92953 911 aa9.41□□□□□ -0.9
HMGXB4-202ENST00000418170 SLC52A1Q9NWF4 448 aa9.41□□□□□ -0.9
HMGXB4-202ENST00000418170 SPG7Q9UQ90 795 aa9.41□□□□□ -0.9
HMGXB4-202ENST00000418170 RGPD1P0DJD0 1748 aa9.4□□□□□ -0.9
HMGXB4-202ENST00000418170 CNTROBQ8N137 903 aa9.4□□□□□ -0.9
HMGXB4-202ENST00000418170 GOLGA5Q8TBA6 731 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms