RNA–Protein interactions for RNA: ENST00000417043.5

RHBDF1-202, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-202ENST00000417043 IARSP41252 1262 aaKnown RBP20.45■□□□□ 0.86
RHBDF1-202ENST00000417043 LMOD3Q0VAK6 560 aa20.45■□□□□ 0.86
RHBDF1-202ENST00000417043 AIMP1Q12904 312 aaKnown RBP20.45■□□□□ 0.86
RHBDF1-202ENST00000417043 BABAM1Q9NWV8 329 aa20.45■□□□□ 0.86
RHBDF1-202ENST00000417043 ADAMTS8Q9UP79 889 aa20.45■□□□□ 0.86
RHBDF1-202ENST00000417043 TRIM35Q9UPQ4 493 aa20.45■□□□□ 0.86
RHBDF1-202ENST00000417043 HOXA10P31260 410 aaPredicted RBP20.44■□□□□ 0.86
RHBDF1-202ENST00000417043 CHADLQ6NUI6 762 aa20.44■□□□□ 0.86
RHBDF1-202ENST00000417043 COPS6Q7L5N1 327 aa20.44■□□□□ 0.86
RHBDF1-202ENST00000417043 ZNF428Q96B54 188 aa20.44■□□□□ 0.86
RHBDF1-202ENST00000417043 CHL1O00533 1208 aa20.43■□□□□ 0.86
RHBDF1-202ENST00000417043 XAGE3Q8WTP9 111 aa20.43■□□□□ 0.86
RHBDF1-202ENST00000417043 RUNDC1Q96C34 613 aa20.43■□□□□ 0.86
RHBDF1-202ENST00000417043 L3MBTL3Q96JM7 780 aaPredicted RBP20.43■□□□□ 0.86
RHBDF1-202ENST00000417043 TAF1DQ9H5J8 278 aaPredicted RBP20.43■□□□□ 0.86
RHBDF1-202ENST00000417043 IBTKQ9P2D0 1353 aaPredicted RBP20.43■□□□□ 0.86
RHBDF1-202ENST00000417043 SNED1Q8TER0 1413 aa20.43■□□□□ 0.86
RHBDF1-202ENST00000417043 WDR43Q15061 677 aaKnown RBP eCLIP20.42■□□□□ 0.86
RHBDF1-202ENST00000417043 PPP1R42Q7Z4L9 355 aa20.42■□□□□ 0.86
RHBDF1-202ENST00000417043 RBM17Q96I25 401 aaKnown RBP20.42■□□□□ 0.86
RHBDF1-202ENST00000417043 SCN4AP35499 1836 aa20.41■□□□□ 0.86
RHBDF1-202ENST00000417043 IQCA1LA6NCM1 817 aa20.41■□□□□ 0.86
RHBDF1-202ENST00000417043 FZD9O00144 591 aa20.41■□□□□ 0.86
RHBDF1-202ENST00000417043 PARP10Q53GL7 1025 aa20.41■□□□□ 0.86
RHBDF1-202ENST00000417043 CRAMP1Q96RY5 1269 aa20.41■□□□□ 0.86
RHBDF1-202ENST00000417043 PSMD1Q99460 953 aa20.41■□□□□ 0.86
RHBDF1-202ENST00000417043 UTP14AQ9BVJ6 771 aaKnown RBP20.41■□□□□ 0.86
RHBDF1-202ENST00000417043 PPEF1O14829 653 aaPredicted RBP20.4■□□□□ 0.86
RHBDF1-202ENST00000417043 COL4A5P29400 1685 aa20.4■□□□□ 0.86
RHBDF1-202ENST00000417043 RIC1Q4ADV7 1423 aa20.4■□□□□ 0.86
RHBDF1-202ENST00000417043 EAPPQ56P03 285 aaPredicted RBP20.4■□□□□ 0.86
RHBDF1-202ENST00000417043 NLRP3Q96P20 1036 aa20.4■□□□□ 0.86
RHBDF1-202ENST00000417043 RNF123Q5XPI4 1314 aa20.38■□□□□ 0.85
RHBDF1-202ENST00000417043 HCLS1P14317 486 aaPredicted RBP20.38■□□□□ 0.85
RHBDF1-202ENST00000417043 SLC10A5Q5PT55 438 aa20.38■□□□□ 0.85
RHBDF1-202ENST00000417043 CC2D2BQ6DHV5 1058 aa20.38■□□□□ 0.85
RHBDF1-202ENST00000417043 LDHDQ86WU2 507 aa20.38■□□□□ 0.85
RHBDF1-202ENST00000417043 JDP2Q8WYK2 163 aa20.38■□□□□ 0.85
RHBDF1-202ENST00000417043 DDX21Q9NR30 783 aaKnown RBP eCLIP20.38■□□□□ 0.85
RHBDF1-202ENST00000417043 CHPF2Q9P2E5 772 aa20.38■□□□□ 0.85
RHBDF1-202ENST00000417043 HACL1Q9UJ83 578 aa20.38■□□□□ 0.85
RHBDF1-202ENST00000417043 ANKRD36CQ5JPF3 1778 aa20.37■□□□□ 0.85
RHBDF1-202ENST00000417043 TCIRG1Q13488 830 aa20.37■□□□□ 0.85
RHBDF1-202ENST00000417043 COL13A1Q5TAT6 717 aaPredicted RBP20.37■□□□□ 0.85
RHBDF1-202ENST00000417043 NLRP10Q86W26 655 aa20.37■□□□□ 0.85
RHBDF1-202ENST00000417043 PRKRIP1Q9H875 184 aaPredicted RBP20.37■□□□□ 0.85
RHBDF1-202ENST00000417043 CLEC11AQ9Y240 323 aa20.37■□□□□ 0.85
RHBDF1-202ENST00000417043 GJA3Q9Y6H8 435 aa20.37■□□□□ 0.85
RHBDF1-202ENST00000417043 EPHX2P34913 555 aa20.36■□□□□ 0.85
RHBDF1-202ENST00000417043 MKRN1Q9UHC7 482 aaKnown RBP20.36■□□□□ 0.85
RHBDF1-202ENST00000417043 TAF1P21675 1872 aa20.36■□□□□ 0.85
RHBDF1-202ENST00000417043 LAMB2P55268 1798 aa20.36■□□□□ 0.85
RHBDF1-202ENST00000417043 ABCC4O15439 1325 aa20.35■□□□□ 0.85
RHBDF1-202ENST00000417043 HDGFL1Q5TGJ6 251 aa20.35■□□□□ 0.85
RHBDF1-202ENST00000417043 GPC2Q8N158 579 aa20.35■□□□□ 0.85
RHBDF1-202ENST00000417043 LARGE2Q8N3Y3 721 aa20.35■□□□□ 0.85
RHBDF1-202ENST00000417043 CREBZFQ9NS37 354 aa20.35■□□□□ 0.85
RHBDF1-202ENST00000417043 TRMT112Q9UI30 125 aaKnown RBP20.35■□□□□ 0.85
RHBDF1-202ENST00000417043 PASKQ96RG2 1323 aa20.34■□□□□ 0.85
RHBDF1-202ENST00000417043 ITGBL1O95965 494 aaPredicted RBP20.34■□□□□ 0.85
RHBDF1-202ENST00000417043 EIF6P56537 245 aaKnown RBP20.34■□□□□ 0.85
RHBDF1-202ENST00000417043 HSP90AB3PQ58FF7 597 aa20.34■□□□□ 0.85
RHBDF1-202ENST00000417043 ATP6V0A2Q9Y487 856 aa20.34■□□□□ 0.85
RHBDF1-202ENST00000417043 DUSP27Q5VZP5 1158 aa20.33■□□□□ 0.85
RHBDF1-202ENST00000417043 MAP1SQ66K74 1059 aaPredicted RBP20.33■□□□□ 0.85
RHBDF1-202ENST00000417043 MBIPQ9NS73 344 aa20.33■□□□□ 0.85
RHBDF1-202ENST00000417043 APAF1O14727 1248 aa20.32■□□□□ 0.84
RHBDF1-202ENST00000417043 HSPA1AP0DMV8 641 aaKnown RBP20.32■□□□□ 0.84
RHBDF1-202ENST00000417043 HSPA1BP0DMV9 641 aaKnown RBP20.32■□□□□ 0.84
RHBDF1-202ENST00000417043 AOC3Q16853 763 aa20.32■□□□□ 0.84
RHBDF1-202ENST00000417043 GRIPAP1Q4V328 841 aa20.32■□□□□ 0.84
RHBDF1-202ENST00000417043 CFAP44Q96MT7 982 aa20.32■□□□□ 0.84
RHBDF1-202ENST00000417043 LTBP1Q14766 1721 aa20.32■□□□□ 0.84
RHBDF1-202ENST00000417043 ADAMTSL1Q8N6G6 1762 aa20.31■□□□□ 0.84
RHBDF1-202ENST00000417043 ATP5J2-PTCD1G3V325 749 aa20.31■□□□□ 0.84
RHBDF1-202ENST00000417043 PPIP5K2O43314 1243 aa20.31■□□□□ 0.84
RHBDF1-202ENST00000417043 EPS15P42566 896 aa20.31■□□□□ 0.84
RHBDF1-202ENST00000417043 ANKRD13DQ6ZTN6 518 aa20.31■□□□□ 0.84
RHBDF1-202ENST00000417043 PLBD2Q8NHP8 589 aa20.31■□□□□ 0.84
RHBDF1-202ENST00000417043 SH3TC1Q8TE82 1336 aa20.3■□□□□ 0.84
RHBDF1-202ENST00000417043 PNMA8AQ86V59 439 aaPredicted RBP20.3■□□□□ 0.84
RHBDF1-202ENST00000417043 NIM1KQ8IY84 436 aa20.3■□□□□ 0.84
RHBDF1-202ENST00000417043 CNTROBQ8N137 903 aa20.3■□□□□ 0.84
RHBDF1-202ENST00000417043 TMX4Q9H1E5 349 aaPredicted RBP20.3■□□□□ 0.84
RHBDF1-202ENST00000417043 DBF4Q9UBU7 674 aaPredicted RBP20.3■□□□□ 0.84
RHBDF1-202ENST00000417043 ELL2O00472 640 aaPredicted RBP20.29■□□□□ 0.84
RHBDF1-202ENST00000417043 BBOX1O75936 387 aa20.29■□□□□ 0.84
RHBDF1-202ENST00000417043 HOXB7P09629 217 aa20.29■□□□□ 0.84
RHBDF1-202ENST00000417043 SCNN1DP51172 638 aa20.29■□□□□ 0.84
RHBDF1-202ENST00000417043 ZNF853P0CG23 659 aa20.28■□□□□ 0.84
RHBDF1-202ENST00000417043 RTL5Q5HYW3 569 aaPredicted RBP20.28■□□□□ 0.84
RHBDF1-202ENST00000417043 DDX46Q7L014 1031 aaKnown RBP20.28■□□□□ 0.84
RHBDF1-202ENST00000417043 SP8Q8IXZ3 490 aa20.28■□□□□ 0.84
RHBDF1-202ENST00000417043 FAM89AQ96GI7 184 aa20.28■□□□□ 0.84
RHBDF1-202ENST00000417043 ISCA1Q9BUE6 129 aa20.28■□□□□ 0.84
RHBDF1-202ENST00000417043 TMEM88BA6NKF7 163 aa20.27■□□□□ 0.84
RHBDF1-202ENST00000417043 LMOD1P29536 600 aaPredicted RBP20.27■□□□□ 0.84
RHBDF1-202ENST00000417043 FMR1Q06787 632 aaKnown RBP eCLIP20.27■□□□□ 0.84
RHBDF1-202ENST00000417043 DPP8Q6V1X1 898 aaPredicted RBP20.27■□□□□ 0.84
RHBDF1-202ENST00000417043 MPNDQ8N594 471 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms