RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 RAD50Q92878 1312 aa17.38■□□□□ 0.37
NCKIPSD-204ENST00000416649 TULP2O00295 520 aa17.38■□□□□ 0.37
NCKIPSD-204ENST00000416649 SKILP12757 684 aa17.38■□□□□ 0.37
NCKIPSD-204ENST00000416649 HSPA4P34932 840 aa17.38■□□□□ 0.37
NCKIPSD-204ENST00000416649 G2E3Q7L622 706 aa17.38■□□□□ 0.37
NCKIPSD-204ENST00000416649 ZNF446Q9NWS9 450 aa17.38■□□□□ 0.37
NCKIPSD-204ENST00000416649 SNX14Q9Y5W7 946 aa17.38■□□□□ 0.37
NCKIPSD-204ENST00000416649 NPHP4O75161 1426 aaPredicted RBP17.38■□□□□ 0.37
NCKIPSD-204ENST00000416649 IRX3P78415 501 aaPredicted RBP17.37■□□□□ 0.37
NCKIPSD-204ENST00000416649 MTHFSDQ2M296 383 aaKnown RBP17.37■□□□□ 0.37
NCKIPSD-204ENST00000416649 ERCC6LQ2NKX8 1250 aa17.37■□□□□ 0.37
NCKIPSD-204ENST00000416649 NECAB1Q8N987 351 aa17.37■□□□□ 0.37
NCKIPSD-204ENST00000416649 ERO1AQ96HE7 468 aa17.37■□□□□ 0.37
NCKIPSD-204ENST00000416649 AKAP12Q02952 1782 aa17.37■□□□□ 0.37
NCKIPSD-204ENST00000416649 NUTM1Q86Y26 1132 aa17.37■□□□□ 0.37
NCKIPSD-204ENST00000416649 KIF24Q5T7B8 1368 aa17.37■□□□□ 0.37
NCKIPSD-204ENST00000416649 SLU7O95391 586 aaKnown RBP17.37■□□□□ 0.37
NCKIPSD-204ENST00000416649 RAD51AP2Q09MP3 1159 aa17.37■□□□□ 0.37
NCKIPSD-204ENST00000416649 FEZ2Q9UHY8 353 aaPredicted RBP17.37■□□□□ 0.37
NCKIPSD-204ENST00000416649 TTC21AQ8NDW8 1320 aa17.37■□□□□ 0.37
NCKIPSD-204ENST00000416649 GOLGA6L19H0YKK7 550 aa17.36■□□□□ 0.37
NCKIPSD-204ENST00000416649 KRT85P78386 507 aa17.36■□□□□ 0.37
NCKIPSD-204ENST00000416649 LMOD3Q0VAK6 560 aa17.36■□□□□ 0.37
NCKIPSD-204ENST00000416649 BMS1Q14692 1282 aaKnown RBP17.36■□□□□ 0.37
NCKIPSD-204ENST00000416649 GORABQ5T7V8 394 aa17.36■□□□□ 0.37
NCKIPSD-204ENST00000416649 PLA2G4DQ86XP0 818 aa17.36■□□□□ 0.37
NCKIPSD-204ENST00000416649 TMX1Q9H3N1 280 aa17.36■□□□□ 0.37
NCKIPSD-204ENST00000416649 SPG7Q9UQ90 795 aa17.36■□□□□ 0.37
NCKIPSD-204ENST00000416649 CYP2C19P33261 490 aa17.36■□□□□ 0.37
NCKIPSD-204ENST00000416649 SLC20A2Q08357 652 aa17.36■□□□□ 0.37
NCKIPSD-204ENST00000416649 LRRC59Q96AG4 307 aaKnown RBP17.36■□□□□ 0.37
NCKIPSD-204ENST00000416649 HOXC9P31274 260 aa17.35■□□□□ 0.37
NCKIPSD-204ENST00000416649 LRRC8AQ8IWT6 810 aa17.35■□□□□ 0.37
NCKIPSD-204ENST00000416649 BICD2Q8TD16 824 aa17.35■□□□□ 0.37
NCKIPSD-204ENST00000416649 USP16Q9Y5T5 823 aa17.35■□□□□ 0.37
NCKIPSD-204ENST00000416649 CCDC171Q6TFL3 1326 aa17.35■□□□□ 0.37
NCKIPSD-204ENST00000416649 HTATSF1O43719 755 aaKnown RBP17.34■□□□□ 0.37
NCKIPSD-204ENST00000416649 LARP1BQ659C4 914 aaKnown RBP17.34■□□□□ 0.37
NCKIPSD-204ENST00000416649 FBXW7Q969H0 707 aa17.34■□□□□ 0.37
NCKIPSD-204ENST00000416649 PNMA6EA0A0J9YXQ4 647 aa17.34■□□□□ 0.37
NCKIPSD-204ENST00000416649 ZC3H6P61129 1189 aaKnown RBP17.34■□□□□ 0.37
NCKIPSD-204ENST00000416649 CWC27Q6UX04 472 aaKnown RBP17.34■□□□□ 0.37
NCKIPSD-204ENST00000416649 SSH2Q76I76 1423 aa17.34■□□□□ 0.37
NCKIPSD-204ENST00000416649 GNAI2P04899 355 aa17.34■□□□□ 0.37
NCKIPSD-204ENST00000416649 TTC14Q96N46 770 aa17.33■□□□□ 0.37
NCKIPSD-204ENST00000416649 FLT4P35916 1363 aa17.33■□□□□ 0.36
NCKIPSD-204ENST00000416649 CCDC69A6NI79 296 aa17.33■□□□□ 0.36
NCKIPSD-204ENST00000416649 CABLES1Q8TDN4 633 aa17.33■□□□□ 0.36
NCKIPSD-204ENST00000416649 CDC37L1Q7L3B6 337 aa17.32■□□□□ 0.36
NCKIPSD-204ENST00000416649 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.32■□□□□ 0.36
NCKIPSD-204ENST00000416649 LRRN4CLQ8ND94 238 aa17.32■□□□□ 0.36
NCKIPSD-204ENST00000416649 KIF1BPQ96EK5 621 aa17.32■□□□□ 0.36
NCKIPSD-204ENST00000416649 SPATA32Q96LK8 384 aa17.32■□□□□ 0.36
NCKIPSD-204ENST00000416649 JAKMIP1Q96N16 626 aaKnown RBP17.32■□□□□ 0.36
NCKIPSD-204ENST00000416649 RSPH14Q9UHP6 348 aa17.32■□□□□ 0.36
NCKIPSD-204ENST00000416649 ADAMTSL3P82987 1691 aa17.32■□□□□ 0.36
NCKIPSD-204ENST00000416649 TSPYL1Q9H0U9 437 aa17.32■□□□□ 0.36
NCKIPSD-204ENST00000416649 PEAK1Q9H792 1746 aa17.32■□□□□ 0.36
NCKIPSD-204ENST00000416649 A0A087WWV3 80 aa17.31■□□□□ 0.36
NCKIPSD-204ENST00000416649 CLCN6P51797 869 aa17.31■□□□□ 0.36
NCKIPSD-204ENST00000416649 C10orf67Q8IYJ2 551 aa17.31■□□□□ 0.36
NCKIPSD-204ENST00000416649 TDRD7Q8NHU6 1098 aaKnown RBP17.31■□□□□ 0.36
NCKIPSD-204ENST00000416649 XRN1Q8IZH2 1706 aaKnown RBP17.31■□□□□ 0.36
NCKIPSD-204ENST00000416649 TEX35Q5T0J7 233 aa17.31■□□□□ 0.36
NCKIPSD-204ENST00000416649 PDRG1Q9NUG6 133 aa17.31■□□□□ 0.36
NCKIPSD-204ENST00000416649 NR1I2O75469 434 aa17.31■□□□□ 0.36
NCKIPSD-204ENST00000416649 ARHGAP29Q52LW3 1261 aa17.31■□□□□ 0.36
NCKIPSD-204ENST00000416649 KRBA2Q6ZNG9 492 aa17.31■□□□□ 0.36
NCKIPSD-204ENST00000416649 FAM53CQ9NYF3 392 aa17.31■□□□□ 0.36
NCKIPSD-204ENST00000416649 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.31■□□□□ 0.36
NCKIPSD-204ENST00000416649 USP31Q70CQ4 1352 aa17.3■□□□□ 0.36
NCKIPSD-204ENST00000416649 TOPAZ1Q8N9V7 1692 aa17.3■□□□□ 0.36
NCKIPSD-204ENST00000416649 BECN2A8MW95 431 aa17.3■□□□□ 0.36
NCKIPSD-204ENST00000416649 SBNO1A3KN83 1393 aa17.3■□□□□ 0.36
NCKIPSD-204ENST00000416649 PNMA6AP0CW24 399 aaPredicted RBP17.3■□□□□ 0.36
NCKIPSD-204ENST00000416649 NYAP1Q6ZVC0 841 aa17.3■□□□□ 0.36
NCKIPSD-204ENST00000416649 FHOD1Q9Y613 1164 aa17.3■□□□□ 0.36
NCKIPSD-204ENST00000416649 SALL3Q9BXA9 1300 aa17.29■□□□□ 0.36
NCKIPSD-204ENST00000416649 SYT10Q6XYQ8 523 aa17.29■□□□□ 0.36
NCKIPSD-204ENST00000416649 PTPRCP08575 1304 aa17.29■□□□□ 0.36
NCKIPSD-204ENST00000416649 ERBB3P21860 1342 aa17.29■□□□□ 0.36
NCKIPSD-204ENST00000416649 HAP1P54257 671 aaPredicted RBP17.29■□□□□ 0.36
NCKIPSD-204ENST00000416649 ADCK5Q3MIX3 580 aa17.29■□□□□ 0.36
NCKIPSD-204ENST00000416649 KRT28Q7Z3Y7 464 aa17.29■□□□□ 0.36
NCKIPSD-204ENST00000416649 HYPKQ9NX55 129 aa17.29■□□□□ 0.36
NCKIPSD-204ENST00000416649 TSPYL4Q9UJ04 414 aa17.29■□□□□ 0.36
NCKIPSD-204ENST00000416649 ATF3P18847 181 aa17.28■□□□□ 0.36
NCKIPSD-204ENST00000416649 CEBPZQ03701 1054 aaKnown RBP17.28■□□□□ 0.36
NCKIPSD-204ENST00000416649 SNW1Q13573 536 aaKnown RBP17.28■□□□□ 0.36
NCKIPSD-204ENST00000416649 NBPF6Q5VWK0 638 aa17.28■□□□□ 0.36
NCKIPSD-204ENST00000416649 PRPF40BQ6NWY9 871 aaKnown RBP17.28■□□□□ 0.36
NCKIPSD-204ENST00000416649 CCAR2Q8N163 923 aaKnown RBP17.28■□□□□ 0.36
NCKIPSD-204ENST00000416649 CHMP4CQ96CF2 233 aa17.28■□□□□ 0.36
NCKIPSD-204ENST00000416649 NBPF4Q96M43 638 aa17.28■□□□□ 0.36
NCKIPSD-204ENST00000416649 ZCCHC17Q9NP64 241 aaKnown RBP17.28■□□□□ 0.36
NCKIPSD-204ENST00000416649 NALCNQ8IZF0 1738 aa17.28■□□□□ 0.36
NCKIPSD-204ENST00000416649 SGSM2O43147 1006 aa17.28■□□□□ 0.36
NCKIPSD-204ENST00000416649 PLA2G4AP47712 749 aa17.28■□□□□ 0.36
NCKIPSD-204ENST00000416649 TCEANC2Q96MN5 208 aa17.28■□□□□ 0.36
NCKIPSD-204ENST00000416649 NRKQ7Z2Y5 1582 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms