RNA–Protein interactions for RNA: ENST00000415763.5

COL20A1-202, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 1,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-202ENST00000415763 HYPKQ9NX55 129 aa25.32■■□□□ 1.64
COL20A1-202ENST00000415763 ANKRD13DQ6ZTN6 518 aa25.31■■□□□ 1.64
COL20A1-202ENST00000415763 UTP14AQ9BVJ6 771 aaKnown RBP25.31■■□□□ 1.64
COL20A1-202ENST00000415763 SPINK5Q9NQ38 1064 aaPredicted RBP25.31■■□□□ 1.64
COL20A1-202ENST00000415763 RIC1Q4ADV7 1423 aa25.3■■□□□ 1.64
COL20A1-202ENST00000415763 LMNB1P20700 586 aa25.3■■□□□ 1.64
COL20A1-202ENST00000415763 SLC10A5Q5PT55 438 aa25.3■■□□□ 1.64
COL20A1-202ENST00000415763 PPP1R42Q7Z4L9 355 aa25.3■■□□□ 1.64
COL20A1-202ENST00000415763 NMRK2Q9NPI5 230 aa25.3■■□□□ 1.64
COL20A1-202ENST00000415763 IL16Q14005 1332 aa25.3■■□□□ 1.64
COL20A1-202ENST00000415763 ISCA1Q9BUE6 129 aa25.29■■□□□ 1.64
COL20A1-202ENST00000415763 SBF1O95248 1867 aa25.29■■□□□ 1.64
COL20A1-202ENST00000415763 TCERG1O14776 1098 aaKnown RBP25.28■■□□□ 1.64
COL20A1-202ENST00000415763 ATP5J2-PTCD1G3V325 749 aa25.27■■□□□ 1.64
COL20A1-202ENST00000415763 HCLS1P14317 486 aaPredicted RBP25.27■■□□□ 1.64
COL20A1-202ENST00000415763 HOXA10P31260 410 aaPredicted RBP25.27■■□□□ 1.64
COL20A1-202ENST00000415763 HSP90AB3PQ58FF7 597 aa25.27■■□□□ 1.64
COL20A1-202ENST00000415763 WDR63Q8IWG1 891 aa25.26■■□□□ 1.63
COL20A1-202ENST00000415763 LTBP3Q9NS15 1303 aa25.26■■□□□ 1.63
COL20A1-202ENST00000415763 FANCIQ9NVI1 1328 aa25.26■■□□□ 1.63
COL20A1-202ENST00000415763 SNED1Q8TER0 1413 aa25.25■■□□□ 1.63
COL20A1-202ENST00000415763 ARFGEF2Q9Y6D5 1785 aa25.25■■□□□ 1.63
COL20A1-202ENST00000415763 CCDC30Q5VVM6 783 aa25.24■■□□□ 1.63
COL20A1-202ENST00000415763 TRMT112Q9UI30 125 aaKnown RBP25.24■■□□□ 1.63
COL20A1-202ENST00000415763 FER1L6Q2WGJ9 1857 aa25.23■■□□□ 1.63
COL20A1-202ENST00000415763 ALDH1B1P30837 517 aa25.23■■□□□ 1.63
COL20A1-202ENST00000415763 TWISTNBQ3B726 338 aaPredicted RBP25.23■■□□□ 1.63
COL20A1-202ENST00000415763 CCDC93Q567U6 631 aa25.23■■□□□ 1.63
COL20A1-202ENST00000415763 TAOK3Q9H2K8 898 aa25.23■■□□□ 1.63
COL20A1-202ENST00000415763 CACNA1SQ13698 1873 aa25.22■■□□□ 1.63
COL20A1-202ENST00000415763 G2E3Q7L622 706 aa25.22■■□□□ 1.63
COL20A1-202ENST00000415763 RPGRQ92834 1020 aaKnown RBP25.22■■□□□ 1.63
COL20A1-202ENST00000415763 ANKRD36CQ5JPF3 1778 aa25.22■■□□□ 1.63
COL20A1-202ENST00000415763 TRIM28Q13263 835 aaKnown RBP25.21■■□□□ 1.63
COL20A1-202ENST00000415763 RIC3Q7Z5B4 369 aa25.21■■□□□ 1.63
COL20A1-202ENST00000415763 FAM89AQ96GI7 184 aa25.21■■□□□ 1.63
COL20A1-202ENST00000415763 NLRP3Q96P20 1036 aa25.21■■□□□ 1.63
COL20A1-202ENST00000415763 CRAMP1Q96RY5 1269 aa25.21■■□□□ 1.63
COL20A1-202ENST00000415763 RNF123Q5XPI4 1314 aa25.2■■□□□ 1.62
COL20A1-202ENST00000415763 SH3TC1Q8TE82 1336 aa25.2■■□□□ 1.62
COL20A1-202ENST00000415763 SOGA3Q5TF21 947 aa25.2■■□□□ 1.62
COL20A1-202ENST00000415763 ZNF521Q96K83 1311 aa25.19■■□□□ 1.62
COL20A1-202ENST00000415763 ZC3H4Q9UPT8 1303 aaKnown RBP25.19■■□□□ 1.62
COL20A1-202ENST00000415763 FKBP4Q02790 459 aaKnown RBP eCLIP25.19■■□□□ 1.62
COL20A1-202ENST00000415763 EXOSC9Q06265 439 aaKnown RBP25.19■■□□□ 1.62
COL20A1-202ENST00000415763 RBM17Q96I25 401 aaKnown RBP25.19■■□□□ 1.62
COL20A1-202ENST00000415763 RRAGCQ9HB90 399 aa25.19■■□□□ 1.62
COL20A1-202ENST00000415763 ZNF277Q9NRM2 450 aaPredicted RBP25.19■■□□□ 1.62
COL20A1-202ENST00000415763 VAMP4O75379 141 aa25.18■■□□□ 1.62
COL20A1-202ENST00000415763 GOLGA2Q08379 1002 aa25.18■■□□□ 1.62
COL20A1-202ENST00000415763 RTL5Q5HYW3 569 aaPredicted RBP25.18■■□□□ 1.62
COL20A1-202ENST00000415763 MYD88Q99836 296 aa25.18■■□□□ 1.62
COL20A1-202ENST00000415763 ABCC4O15439 1325 aa25.17■■□□□ 1.62
COL20A1-202ENST00000415763 GLTPD2A6NH11 291 aa25.17■■□□□ 1.62
COL20A1-202ENST00000415763 POTECB2RU33 542 aa25.16■■□□□ 1.62
COL20A1-202ENST00000415763 RTKN2Q8IZC4 609 aa25.16■■□□□ 1.62
COL20A1-202ENST00000415763 JARID2Q92833 1246 aaPredicted RBP25.16■■□□□ 1.62
COL20A1-202ENST00000415763 KDM2BQ8NHM5 1336 aa25.15■■□□□ 1.62
COL20A1-202ENST00000415763 PPEF1O14829 653 aaPredicted RBP25.15■■□□□ 1.62
COL20A1-202ENST00000415763 SLC4A2P04920 1241 aa25.15■■□□□ 1.62
COL20A1-202ENST00000415763 METTL22Q9BUU2 404 aaPredicted RBP25.15■■□□□ 1.62
COL20A1-202ENST00000415763 MAP3K2Q9Y2U5 619 aa25.15■■□□□ 1.62
COL20A1-202ENST00000415763 PI4KAP2A4QPH2 592 aa25.14■■□□□ 1.62
COL20A1-202ENST00000415763 PI4KAP1Q8N8J0 262 aa25.14■■□□□ 1.62
COL20A1-202ENST00000415763 TIAM2Q8IVF5 1701 aa25.14■■□□□ 1.61
COL20A1-202ENST00000415763 COL4A1P02462 1669 aa25.13■■□□□ 1.61
COL20A1-202ENST00000415763 CCDC88AQ3V6T2 1871 aa25.13■■□□□ 1.61
COL20A1-202ENST00000415763 IGKV5-2P06315 115 aa25.13■■□□□ 1.61
COL20A1-202ENST00000415763 KSR2Q6VAB6 950 aa25.13■■□□□ 1.61
COL20A1-202ENST00000415763 CEP350Q5VT06 3117 aa25.12■■□□□ 1.61
COL20A1-202ENST00000415763 ZBTB38Q8NAP3 1195 aaPredicted RBP25.12■■□□□ 1.61
COL20A1-202ENST00000415763 PSMD1Q99460 953 aa25.12■■□□□ 1.61
COL20A1-202ENST00000415763 STK31Q9BXU1 1019 aa25.12■■□□□ 1.61
COL20A1-202ENST00000415763 ATP6V0A2Q9Y487 856 aa25.12■■□□□ 1.61
COL20A1-202ENST00000415763 COL4A5P29400 1685 aa25.12■■□□□ 1.61
COL20A1-202ENST00000415763 LAMB2P55268 1798 aa25.12■■□□□ 1.61
COL20A1-202ENST00000415763 IRS4O14654 1257 aaPredicted RBP25.11■■□□□ 1.61
COL20A1-202ENST00000415763 TOMM70O94826 608 aa25.11■■□□□ 1.61
COL20A1-202ENST00000415763 SF3B3Q15393 1217 aaKnown RBP25.11■■□□□ 1.61
COL20A1-202ENST00000415763 CHMP4AQ9BY43 222 aa25.11■■□□□ 1.61
COL20A1-202ENST00000415763 DDX60Q8IY21 1712 aaKnown RBP25.11■■□□□ 1.61
COL20A1-202ENST00000415763 DDNO94850 711 aaPredicted RBP25.1■■□□□ 1.61
COL20A1-202ENST00000415763 DDX58O95786 925 aaKnown RBP25.1■■□□□ 1.61
COL20A1-202ENST00000415763 IARSP41252 1262 aaKnown RBP25.1■■□□□ 1.61
COL20A1-202ENST00000415763 CC2D2BQ6DHV5 1058 aa25.1■■□□□ 1.61
COL20A1-202ENST00000415763 CCDC191Q8NCU4 936 aa25.1■■□□□ 1.61
COL20A1-202ENST00000415763 GRAPQ13588 217 aa25.09■■□□□ 1.61
COL20A1-202ENST00000415763 GRAPLQ8TC17 118 aaPredicted RBP25.09■■□□□ 1.61
COL20A1-202ENST00000415763 ZNF541Q9H0D2 1346 aa25.09■■□□□ 1.61
COL20A1-202ENST00000415763 FLIIQ13045 1269 aa25.08■■□□□ 1.61
COL20A1-202ENST00000415763 DDX46Q7L014 1031 aaKnown RBP25.08■■□□□ 1.61
COL20A1-202ENST00000415763 CELF1Q92879 486 aaKnown RBP25.08■■□□□ 1.61
COL20A1-202ENST00000415763 CWC25Q9NXE8 425 aaPredicted RBP25.08■■□□□ 1.61
COL20A1-202ENST00000415763 CCER2I3L3R5 266 aa25.07■■□□□ 1.6
COL20A1-202ENST00000415763 BBOX1O75936 387 aa25.07■■□□□ 1.6
COL20A1-202ENST00000415763 PCCAP05165 728 aaPredicted RBP25.07■■□□□ 1.6
COL20A1-202ENST00000415763 CWF19L2Q2TBE0 894 aaKnown RBP25.07■■□□□ 1.6
COL20A1-202ENST00000415763 MYH16Q9H6N6 1097 aa25.07■■□□□ 1.6
COL20A1-202ENST00000415763 DICER1Q9UPY3 1922 aaKnown RBP25.07■■□□□ 1.6
COL20A1-202ENST00000415763 SP8Q8IXZ3 490 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms