RNA–Protein interactions for RNA: ENST00000414672.5

RHBDD3-204, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-204ENST00000414672 CC2D2BQ6DHV5 1058 aa28.49■■■□□ 2.15
RHBDD3-204ENST00000414672 EIF4A1P60842 406 aaKnown RBP28.48■■■□□ 2.15
RHBDD3-204ENST00000414672 TCERG1O14776 1098 aaKnown RBP28.47■■■□□ 2.15
RHBDD3-204ENST00000414672 THUMPD2Q9BTF0 503 aaKnown RBP28.47■■■□□ 2.15
RHBDD3-204ENST00000414672 LMOD1P29536 600 aaPredicted RBP28.46■■■□□ 2.15
RHBDD3-204ENST00000414672 RBM17Q96I25 401 aaKnown RBP28.46■■■□□ 2.15
RHBDD3-204ENST00000414672 CTCFP49711 727 aaPredicted RBP28.45■■■□□ 2.14
RHBDD3-204ENST00000414672 SUSD4Q5VX71 490 aa28.45■■■□□ 2.14
RHBDD3-204ENST00000414672 LARGE2Q8N3Y3 721 aa28.45■■■□□ 2.14
RHBDD3-204ENST00000414672 HOXA10P31260 410 aaPredicted RBP28.44■■■□□ 2.14
RHBDD3-204ENST00000414672 NFE2L2Q16236 605 aa28.44■■■□□ 2.14
RHBDD3-204ENST00000414672 DEFB115Q30KQ5 88 aa28.44■■■□□ 2.14
RHBDD3-204ENST00000414672 PRDM10Q9NQV6 1147 aa28.44■■■□□ 2.14
RHBDD3-204ENST00000414672 ABT1Q9ULW3 272 aaKnown RBP28.44■■■□□ 2.14
RHBDD3-204ENST00000414672 UBN2Q6ZU65 1347 aa28.43■■■□□ 2.14
RHBDD3-204ENST00000414672 GRIPAP1Q4V328 841 aa28.43■■■□□ 2.14
RHBDD3-204ENST00000414672 LAMB4A4D0S4 1761 aa28.42■■■□□ 2.14
RHBDD3-204ENST00000414672 PPEF1O14829 653 aaPredicted RBP28.42■■■□□ 2.14
RHBDD3-204ENST00000414672 PLEKHF1Q96S99 279 aa28.42■■■□□ 2.14
RHBDD3-204ENST00000414672 TMX4Q9H1E5 349 aaPredicted RBP28.42■■■□□ 2.14
RHBDD3-204ENST00000414672 MAPK8IP3Q9UPT6 1336 aa28.42■■■□□ 2.14
RHBDD3-204ENST00000414672 PPP1R42Q7Z4L9 355 aa28.41■■■□□ 2.14
RHBDD3-204ENST00000414672 CRAMP1Q96RY5 1269 aa28.41■■■□□ 2.14
RHBDD3-204ENST00000414672 PNNQ9H307 717 aaKnown RBP28.41■■■□□ 2.14
RHBDD3-204ENST00000414672 ZNF34Q8IZ26 560 aa28.4■■■□□ 2.14
RHBDD3-204ENST00000414672 WBP1LQ9NX94 342 aa28.4■■■□□ 2.14
RHBDD3-204ENST00000414672 SNED1Q8TER0 1413 aa28.4■■■□□ 2.14
RHBDD3-204ENST00000414672 IBTKQ9P2D0 1353 aaPredicted RBP28.39■■■□□ 2.14
RHBDD3-204ENST00000414672 RASSF10A6NK89 507 aa28.39■■■□□ 2.14
RHBDD3-204ENST00000414672 GIGYF2Q6Y7W6 1299 aaKnown RBP28.39■■■□□ 2.14
RHBDD3-204ENST00000414672 NTSR2O95665 410 aa28.38■■■□□ 2.13
RHBDD3-204ENST00000414672 EPS15P42566 896 aa28.38■■■□□ 2.13
RHBDD3-204ENST00000414672 LBX1P52954 281 aa28.38■■■□□ 2.13
RHBDD3-204ENST00000414672 NIM1KQ8IY84 436 aa28.38■■■□□ 2.13
RHBDD3-204ENST00000414672 NLRP3Q96P20 1036 aa28.38■■■□□ 2.13
RHBDD3-204ENST00000414672 DDX21Q9NR30 783 aaKnown RBP eCLIP28.38■■■□□ 2.13
RHBDD3-204ENST00000414672 NUP98P52948 1817 aa28.38■■■□□ 2.13
RHBDD3-204ENST00000414672 ADAMTSL1Q8N6G6 1762 aa28.37■■■□□ 2.13
RHBDD3-204ENST00000414672 PARP10Q53GL7 1025 aa28.37■■■□□ 2.13
RHBDD3-204ENST00000414672 C3orf67Q6ZVT6 689 aa28.37■■■□□ 2.13
RHBDD3-204ENST00000414672 SLC51AQ86UW1 340 aa28.37■■■□□ 2.13
RHBDD3-204ENST00000414672 TSPYL4Q9UJ04 414 aa28.37■■■□□ 2.13
RHBDD3-204ENST00000414672 KDM3BQ7LBC6 1761 aa28.37■■■□□ 2.13
RHBDD3-204ENST00000414672 RIC1Q4ADV7 1423 aa28.36■■■□□ 2.13
RHBDD3-204ENST00000414672 PPIP5K2O43314 1243 aa28.36■■■□□ 2.13
RHBDD3-204ENST00000414672 EIF2S2P20042 333 aaKnown RBP28.36■■■□□ 2.13
RHBDD3-204ENST00000414672 PAXIP1Q6ZW49 1069 aaPredicted RBP28.36■■■□□ 2.13
RHBDD3-204ENST00000414672 ERBB4Q15303 1308 aa28.36■■■□□ 2.13
RHBDD3-204ENST00000414672 WDR33Q9C0J8 1336 aaKnown RBP28.36■■■□□ 2.13
RHBDD3-204ENST00000414672 COL4A5P29400 1685 aa28.35■■■□□ 2.13
RHBDD3-204ENST00000414672 SCNN1DP51172 638 aa28.35■■■□□ 2.13
RHBDD3-204ENST00000414672 UTP14AQ9BVJ6 771 aaKnown RBP28.35■■■□□ 2.13
RHBDD3-204ENST00000414672 DLG5Q8TDM6 1919 aa28.34■■■□□ 2.13
RHBDD3-204ENST00000414672 MAP2K1Q02750 393 aaPredicted RBP28.34■■■□□ 2.13
RHBDD3-204ENST00000414672 AOC3Q16853 763 aa28.33■■■□□ 2.13
RHBDD3-204ENST00000414672 USP50Q70EL3 339 aaPredicted RBP28.33■■■□□ 2.13
RHBDD3-204ENST00000414672 FMR1Q06787 632 aaKnown RBP eCLIP28.32■■■□□ 2.12
RHBDD3-204ENST00000414672 GRM1Q13255 1194 aa28.32■■■□□ 2.12
RHBDD3-204ENST00000414672 ATP6V0A2Q9Y487 856 aa28.32■■■□□ 2.12
RHBDD3-204ENST00000414672 RIPK4P57078 832 aa28.3■■■□□ 2.12
RHBDD3-204ENST00000414672 TRAF5O00463 557 aa28.29■■■□□ 2.12
RHBDD3-204ENST00000414672 ANXA1P04083 346 aa28.29■■■□□ 2.12
RHBDD3-204ENST00000414672 HSPA8P11142 646 aaKnown RBP28.29■■■□□ 2.12
RHBDD3-204ENST00000414672 PDIA6Q15084 440 aa28.29■■■□□ 2.12
RHBDD3-204ENST00000414672 SLC10A5Q5PT55 438 aa28.29■■■□□ 2.12
RHBDD3-204ENST00000414672 SUPT20HQ8NEM7 779 aa28.29■■■□□ 2.12
RHBDD3-204ENST00000414672 PROSER3Q2NL68 480 aa28.28■■■□□ 2.12
RHBDD3-204ENST00000414672 NECTIN2Q92692 538 aa28.28■■■□□ 2.12
RHBDD3-204ENST00000414672 CAPNS2Q96L46 248 aa28.28■■■□□ 2.12
RHBDD3-204ENST00000414672 BEGAINQ9BUH8 593 aa28.28■■■□□ 2.12
RHBDD3-204ENST00000414672 VPS33BQ9H267 617 aa28.28■■■□□ 2.12
RHBDD3-204ENST00000414672 ZNRF3Q9ULT6 936 aa28.28■■■□□ 2.12
RHBDD3-204ENST00000414672 ABCC4O15439 1325 aa28.27■■■□□ 2.12
RHBDD3-204ENST00000414672 ECE1P42892 770 aa28.27■■■□□ 2.12
RHBDD3-204ENST00000414672 AIMP1Q12904 312 aaKnown RBP28.27■■■□□ 2.12
RHBDD3-204ENST00000414672 DPP8Q6V1X1 898 aaPredicted RBP28.27■■■□□ 2.12
RHBDD3-204ENST00000414672 ADARB2Q9NS39 739 aaKnown RBP28.27■■■□□ 2.12
RHBDD3-204ENST00000414672 GPRC5DQ9NZD1 345 aa28.27■■■□□ 2.12
RHBDD3-204ENST00000414672 LTBP1Q14766 1721 aa28.26■■■□□ 2.12
RHBDD3-204ENST00000414672 LRP10Q7Z4F1 713 aa28.26■■■□□ 2.11
RHBDD3-204ENST00000414672 BBOX1O75936 387 aa28.25■■■□□ 2.11
RHBDD3-204ENST00000414672 HCLS1P14317 486 aaPredicted RBP28.25■■■□□ 2.11
RHBDD3-204ENST00000414672 CXCL9Q07325 125 aa28.25■■■□□ 2.11
RHBDD3-204ENST00000414672 HSP90AB3PQ58FF7 597 aa28.25■■■□□ 2.11
RHBDD3-204ENST00000414672 CST9Q5W186 159 aa28.25■■■□□ 2.11
RHBDD3-204ENST00000414672 CYP4F22Q6NT55 531 aa28.25■■■□□ 2.11
RHBDD3-204ENST00000414672 COPS6Q7L5N1 327 aa28.25■■■□□ 2.11
RHBDD3-204ENST00000414672 GPR101Q96P66 508 aaPredicted RBP28.25■■■□□ 2.11
RHBDD3-204ENST00000414672 MPNDQ8N594 471 aa28.24■■■□□ 2.11
RHBDD3-204ENST00000414672 GMPSP49915 693 aaPredicted RBP28.23■■■□□ 2.11
RHBDD3-204ENST00000414672 DDX46Q7L014 1031 aaKnown RBP28.23■■■□□ 2.11
RHBDD3-204ENST00000414672 SP8Q8IXZ3 490 aa28.23■■■□□ 2.11
RHBDD3-204ENST00000414672 XAGE3Q8WTP9 111 aa28.23■■■□□ 2.11
RHBDD3-204ENST00000414672 BABAM1Q9NWV8 329 aa28.23■■■□□ 2.11
RHBDD3-204ENST00000414672 TRMT112Q9UI30 125 aaKnown RBP28.23■■■□□ 2.11
RHBDD3-204ENST00000414672 LMOD3Q0VAK6 560 aa28.22■■■□□ 2.11
RHBDD3-204ENST00000414672 NLRP10Q86W26 655 aa28.22■■■□□ 2.11
RHBDD3-204ENST00000414672 BCL2L13Q9BXK5 485 aa28.22■■■□□ 2.11
RHBDD3-204ENST00000414672 RTFDC1Q9BY42 306 aaPredicted RBP28.22■■■□□ 2.11
RHBDD3-204ENST00000414672 CIAPIN1Q6FI81 312 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms