RNA–Protein interactions for RNA: ENST00000412562.1

PHBP3-201, Transcript of prohibitin pseudogene 3, humanhuman

BASIC

Gene PHBP3, Length 819 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHBP3-201ENST00000412562 BABAM1Q9NWV8 329 aa16.15■□□□□ 0.18
PHBP3-201ENST00000412562 DICER1Q9UPY3 1922 aaKnown RBP16.15■□□□□ 0.18
PHBP3-201ENST00000412562 ZNF541Q9H0D2 1346 aa16.15■□□□□ 0.18
PHBP3-201ENST00000412562 SYNE4Q8N205 404 aa16.14■□□□□ 0.17
PHBP3-201ENST00000412562 ALDH1B1P30837 517 aa16.13■□□□□ 0.17
PHBP3-201ENST00000412562 WDR90Q96KV7 1748 aa16.13■□□□□ 0.17
PHBP3-201ENST00000412562 SNED1Q8TER0 1413 aa16.12■□□□□ 0.17
PHBP3-201ENST00000412562 HOXA10P31260 410 aaPredicted RBP16.12■□□□□ 0.17
PHBP3-201ENST00000412562 RTKN2Q8IZC4 609 aa16.12■□□□□ 0.17
PHBP3-201ENST00000412562 RPGRQ92834 1020 aaKnown RBP16.12■□□□□ 0.17
PHBP3-201ENST00000412562 CHPF2Q9P2E5 772 aa16.12■□□□□ 0.17
PHBP3-201ENST00000412562 CCDC184Q52MB2 194 aa16.11■□□□□ 0.17
PHBP3-201ENST00000412562 UTP14AQ9BVJ6 771 aaKnown RBP16.11■□□□□ 0.17
PHBP3-201ENST00000412562 IBTKQ9P2D0 1353 aaPredicted RBP16.11■□□□□ 0.17
PHBP3-201ENST00000412562 APAF1O14727 1248 aa16.1■□□□□ 0.17
PHBP3-201ENST00000412562 HCLS1P14317 486 aaPredicted RBP16.1■□□□□ 0.17
PHBP3-201ENST00000412562 IARSP41252 1262 aaKnown RBP16.1■□□□□ 0.17
PHBP3-201ENST00000412562 PARP10Q53GL7 1025 aa16.1■□□□□ 0.17
PHBP3-201ENST00000412562 PPP1R42Q7Z4L9 355 aa16.1■□□□□ 0.17
PHBP3-201ENST00000412562 KLRG1Q96E93 195 aa16.1■□□□□ 0.17
PHBP3-201ENST00000412562 DDX21Q9NR30 783 aaKnown RBP eCLIP16.1■□□□□ 0.17
PHBP3-201ENST00000412562 COL4A5P29400 1685 aa16.1■□□□□ 0.17
PHBP3-201ENST00000412562 PCNTO95613 3336 aa16.1■□□□□ 0.17
PHBP3-201ENST00000412562 SLC10A5Q5PT55 438 aa16.09■□□□□ 0.17
PHBP3-201ENST00000412562 NLRP10Q86W26 655 aa16.09■□□□□ 0.17
PHBP3-201ENST00000412562 RBM17Q96I25 401 aaKnown RBP16.09■□□□□ 0.17
PHBP3-201ENST00000412562 MBIPQ9NS73 344 aa16.09■□□□□ 0.17
PHBP3-201ENST00000412562 RIC1Q4ADV7 1423 aa16.09■□□□□ 0.17
PHBP3-201ENST00000412562 FZD9O00144 591 aa16.08■□□□□ 0.16
PHBP3-201ENST00000412562 PPEF1O14829 653 aaPredicted RBP16.08■□□□□ 0.16
PHBP3-201ENST00000412562 TCIRG1Q13488 830 aa16.08■□□□□ 0.16
PHBP3-201ENST00000412562 HDGFL1Q5TGJ6 251 aa16.08■□□□□ 0.16
PHBP3-201ENST00000412562 CHADLQ6NUI6 762 aa16.08■□□□□ 0.16
PHBP3-201ENST00000412562 L3MBTL3Q96JM7 780 aaPredicted RBP16.08■□□□□ 0.16
PHBP3-201ENST00000412562 CFAP44Q96MT7 982 aa16.08■□□□□ 0.16
PHBP3-201ENST00000412562 CRAMP1Q96RY5 1269 aa16.08■□□□□ 0.16
PHBP3-201ENST00000412562 PSMD1Q99460 953 aa16.08■□□□□ 0.16
PHBP3-201ENST00000412562 TAF1DQ9H5J8 278 aaPredicted RBP16.08■□□□□ 0.16
PHBP3-201ENST00000412562 ELL2O00472 640 aaPredicted RBP16.07■□□□□ 0.16
PHBP3-201ENST00000412562 ZNF853P0CG23 659 aa16.07■□□□□ 0.16
PHBP3-201ENST00000412562 DUSP27Q5VZP5 1158 aa16.07■□□□□ 0.16
PHBP3-201ENST00000412562 NLRP3Q96P20 1036 aa16.07■□□□□ 0.16
PHBP3-201ENST00000412562 ABCC4O15439 1325 aa16.07■□□□□ 0.16
PHBP3-201ENST00000412562 RNF123Q5XPI4 1314 aa16.06■□□□□ 0.16
PHBP3-201ENST00000412562 JMYQ8N9B5 988 aa16.06■□□□□ 0.16
PHBP3-201ENST00000412562 TRMT112Q9UI30 125 aaKnown RBP16.06■□□□□ 0.16
PHBP3-201ENST00000412562 ATP5J2-PTCD1G3V325 749 aa16.05■□□□□ 0.16
PHBP3-201ENST00000412562 EAPPQ56P03 285 aaPredicted RBP16.05■□□□□ 0.16
PHBP3-201ENST00000412562 HSP90AB3PQ58FF7 597 aa16.04■□□□□ 0.16
PHBP3-201ENST00000412562 IFFO2Q5TF58 517 aa16.04■□□□□ 0.16
PHBP3-201ENST00000412562 CC2D2BQ6DHV5 1058 aa16.04■□□□□ 0.16
PHBP3-201ENST00000412562 ANKRD13DQ6ZTN6 518 aa16.04■□□□□ 0.16
PHBP3-201ENST00000412562 LARGE2Q8N3Y3 721 aa16.04■□□□□ 0.16
PHBP3-201ENST00000412562 GJA3Q9Y6H8 435 aa16.04■□□□□ 0.16
PHBP3-201ENST00000412562 SH3TC1Q8TE82 1336 aa16.03■□□□□ 0.16
PHBP3-201ENST00000412562 IQCA1LA6NCM1 817 aa16.03■□□□□ 0.16
PHBP3-201ENST00000412562 RTL5Q5HYW3 569 aaPredicted RBP16.03■□□□□ 0.16
PHBP3-201ENST00000412562 PLBD2Q8NHP8 589 aa16.03■□□□□ 0.16
PHBP3-201ENST00000412562 JDP2Q8WYK2 163 aa16.03■□□□□ 0.16
PHBP3-201ENST00000412562 FAM89AQ96GI7 184 aa16.03■□□□□ 0.16
PHBP3-201ENST00000412562 PHAXQ9H814 394 aaKnown RBP16.03■□□□□ 0.16
PHBP3-201ENST00000412562 DBF4Q9UBU7 674 aaPredicted RBP16.03■□□□□ 0.16
PHBP3-201ENST00000412562 HACL1Q9UJ83 578 aa16.03■□□□□ 0.16
PHBP3-201ENST00000412562 ATP6V0A2Q9Y487 856 aa16.03■□□□□ 0.16
PHBP3-201ENST00000412562 HOXB7P09629 217 aa16.02■□□□□ 0.16
PHBP3-201ENST00000412562 EPHX2P34913 555 aa16.02■□□□□ 0.16
PHBP3-201ENST00000412562 AOC3Q16853 763 aa16.02■□□□□ 0.16
PHBP3-201ENST00000412562 GPC2Q8N158 579 aa16.02■□□□□ 0.16
PHBP3-201ENST00000412562 C8orf58Q8NAV2 365 aa16.02■□□□□ 0.16
PHBP3-201ENST00000412562 ISCA1Q9BUE6 129 aa16.02■□□□□ 0.16
PHBP3-201ENST00000412562 PASKQ96RG2 1323 aa16.01■□□□□ 0.15
PHBP3-201ENST00000412562 ANKRD36CQ5JPF3 1778 aa16.01■□□□□ 0.15
PHBP3-201ENST00000412562 PPIP5K2O43314 1243 aa16.01■□□□□ 0.15
PHBP3-201ENST00000412562 ITGBL1O95965 494 aaPredicted RBP16.01■□□□□ 0.15
PHBP3-201ENST00000412562 LDHDQ86WU2 507 aa16.01■□□□□ 0.15
PHBP3-201ENST00000412562 IFT57Q9NWB7 429 aa16.01■□□□□ 0.15
PHBP3-201ENST00000412562 HYPKQ9NX55 129 aa16.01■□□□□ 0.15
PHBP3-201ENST00000412562 CLEC11AQ9Y240 323 aa16.01■□□□□ 0.15
PHBP3-201ENST00000412562 TAF1P21675 1872 aa16.01■□□□□ 0.15
PHBP3-201ENST00000412562 LAMB2P55268 1798 aa16■□□□□ 0.15
PHBP3-201ENST00000412562 EPS15P42566 896 aa16■□□□□ 0.15
PHBP3-201ENST00000412562 EIF6P56537 245 aaKnown RBP16■□□□□ 0.15
PHBP3-201ENST00000412562 MAP1SQ66K74 1059 aaPredicted RBP16■□□□□ 0.15
PHBP3-201ENST00000412562 TSPYL6Q8N831 410 aa16■□□□□ 0.15
PHBP3-201ENST00000412562 MKRN1Q9UHC7 482 aaKnown RBP16■□□□□ 0.15
PHBP3-201ENST00000412562 SCN4AP35499 1836 aa16■□□□□ 0.15
PHBP3-201ENST00000412562 COL4A1P02462 1669 aa15.99■□□□□ 0.15
PHBP3-201ENST00000412562 BBOX1O75936 387 aa15.99■□□□□ 0.15
PHBP3-201ENST00000412562 SCNN1DP51172 638 aa15.99■□□□□ 0.15
PHBP3-201ENST00000412562 GNAI1P63096 354 aa15.99■□□□□ 0.15
PHBP3-201ENST00000412562 GRAPQ13588 217 aa15.99■□□□□ 0.15
PHBP3-201ENST00000412562 DDX46Q7L014 1031 aaKnown RBP15.99■□□□□ 0.15
PHBP3-201ENST00000412562 SP8Q8IXZ3 490 aa15.99■□□□□ 0.15
PHBP3-201ENST00000412562 GRAPLQ8TC17 118 aaPredicted RBP15.99■□□□□ 0.15
PHBP3-201ENST00000412562 JARID2Q92833 1246 aaPredicted RBP15.99■□□□□ 0.15
PHBP3-201ENST00000412562 TSR2Q969E8 191 aaKnown RBP15.99■□□□□ 0.15
PHBP3-201ENST00000412562 LTBP1Q14766 1721 aa15.99■□□□□ 0.15
PHBP3-201ENST00000412562 FMR1Q06787 632 aaKnown RBP eCLIP15.98■□□□□ 0.15
PHBP3-201ENST00000412562 COL13A1Q5TAT6 717 aaPredicted RBP15.98■□□□□ 0.15
PHBP3-201ENST00000412562 DPP8Q6V1X1 898 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms