RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 MROH2AA6NES4 1674 aa8.19□□□□□ -1.1
LINC00342-201ENST00000412393 BNIP3LO60238 219 aa8.19□□□□□ -1.1
LINC00342-201ENST00000412393 ITGB7P26010 798 aa8.19□□□□□ -1.1
LINC00342-201ENST00000412393 ADH6P28332 368 aa8.19□□□□□ -1.1
LINC00342-201ENST00000412393 GATA4P43694 442 aa8.19□□□□□ -1.1
LINC00342-201ENST00000412393 HSPA2P54652 639 aa8.19□□□□□ -1.1
LINC00342-201ENST00000412393 FAM182BQ5T319 152 aa8.19□□□□□ -1.1
LINC00342-201ENST00000412393 FHDC1Q9C0D6 1143 aaPredicted RBP8.19□□□□□ -1.1
LINC00342-201ENST00000412393 KDM4CQ9H3R0 1056 aa8.19□□□□□ -1.1
LINC00342-201ENST00000412393 RUBCNLQ9H714 662 aa8.19□□□□□ -1.1
LINC00342-201ENST00000412393 GOPCQ9HD26 462 aa8.19□□□□□ -1.1
LINC00342-201ENST00000412393 A2MP01023 1474 aa8.19□□□□□ -1.1
LINC00342-201ENST00000412393 PLXNC1O60486 1568 aa8.18□□□□□ -1.1
LINC00342-201ENST00000412393 SPDYE3A6NKU9 549 aa8.18□□□□□ -1.1
LINC00342-201ENST00000412393 SPATA31C1P0DKV0 1188 aa8.18□□□□□ -1.1
LINC00342-201ENST00000412393 PHKA2P46019 1235 aa8.18□□□□□ -1.1
LINC00342-201ENST00000412393 C4orf17Q53FE4 359 aa8.18□□□□□ -1.1
LINC00342-201ENST00000412393 NLRP8Q86W28 1048 aa8.18□□□□□ -1.1
LINC00342-201ENST00000412393 RHBDD1Q8TEB9 315 aa8.18□□□□□ -1.1
LINC00342-201ENST00000412393 PCDHGC4Q9Y5F7 938 aa8.18□□□□□ -1.1
LINC00342-201ENST00000412393 RTEL1-TNFRSF6BF6WH68 1400 aa8.18□□□□□ -1.1
LINC00342-201ENST00000412393 CNTLNQ9NXG0 1405 aa8.18□□□□□ -1.1
LINC00342-201ENST00000412393 CCDC141Q6ZP82 1450 aa8.18□□□□□ -1.1
LINC00342-201ENST00000412393 CLTCQ00610 1675 aaKnown RBP8.18□□□□□ -1.1
LINC00342-201ENST00000412393 SOCS7O14512 581 aa8.17□□□□□ -1.1
LINC00342-201ENST00000412393 CTBSQ01459 385 aa8.17□□□□□ -1.1
LINC00342-201ENST00000412393 KANK4Q5T7N3 995 aaPredicted RBP8.17□□□□□ -1.1
LINC00342-201ENST00000412393 CHSY3Q70JA7 882 aa8.17□□□□□ -1.1
LINC00342-201ENST00000412393 FAM117AQ9C073 453 aa8.17□□□□□ -1.1
LINC00342-201ENST00000412393 RAB6BQ9NRW1 208 aa8.17□□□□□ -1.1
LINC00342-201ENST00000412393 ARHGEF5Q12774 1597 aa8.17□□□□□ -1.1
LINC00342-201ENST00000412393 NEURL1BA8MQ27 555 aa8.16□□□□□ -1.1
LINC00342-201ENST00000412393 DOC2BQ14184 412 aa8.16□□□□□ -1.1
LINC00342-201ENST00000412393 UHRF1BP1Q6BDS2 1440 aa8.16□□□□□ -1.1
LINC00342-201ENST00000412393 PPARGC1BQ86YN6 1023 aaKnown RBP8.16□□□□□ -1.1
LINC00342-201ENST00000412393 GJD4Q96KN9 370 aaPredicted RBP8.16□□□□□ -1.1
LINC00342-201ENST00000412393 GGT6Q6P531 493 aa8.15□□□□□ -1.1
LINC00342-201ENST00000412393 KRTAP1-3Q8IUG1 177 aa8.15□□□□□ -1.1
LINC00342-201ENST00000412393 MYOM3Q5VTT5 1437 aa8.14□□□□□ -1.11
LINC00342-201ENST00000412393 DHX29Q7Z478 1369 aaKnown RBP8.14□□□□□ -1.11
LINC00342-201ENST00000412393 TSPY4P0CV99 314 aa8.14□□□□□ -1.11
LINC00342-201ENST00000412393 TSPY10P0CW01 314 aa8.14□□□□□ -1.11
LINC00342-201ENST00000412393 TBC1D9Q6ZT07 1266 aa8.14□□□□□ -1.11
LINC00342-201ENST00000412393 STRCQ7RTU9 1775 aa8.14□□□□□ -1.11
LINC00342-201ENST00000412393 MAST1Q9Y2H9 1570 aa8.14□□□□□ -1.11
LINC00342-201ENST00000412393 MIA2Q96PC5 1412 aa8.13□□□□□ -1.11
LINC00342-201ENST00000412393 ZMYM3Q14202 1370 aa8.13□□□□□ -1.11
LINC00342-201ENST00000412393 NPATQ14207 1427 aa8.12□□□□□ -1.11
LINC00342-201ENST00000412393 SCO2A0A1W2PP80 73 aa8.12□□□□□ -1.11
LINC00342-201ENST00000412393 KIF3BO15066 747 aa8.12□□□□□ -1.11
LINC00342-201ENST00000412393 ZCCHC2Q9C0B9 1178 aaKnown RBP8.12□□□□□ -1.11
LINC00342-201ENST00000412393 DNAAF2Q9NVR5 837 aaKnown RBP8.12□□□□□ -1.11
LINC00342-201ENST00000412393 CROCC2H7BZ55 1655 aa8.11□□□□□ -1.11
LINC00342-201ENST00000412393 PTPN23Q9H3S7 1636 aa8.11□□□□□ -1.11
LINC00342-201ENST00000412393 APBB1O00213 710 aa8.11□□□□□ -1.11
LINC00342-201ENST00000412393 USP4Q13107 963 aa8.11□□□□□ -1.11
LINC00342-201ENST00000412393 RSPO4Q2I0M5 234 aaPredicted RBP8.11□□□□□ -1.11
LINC00342-201ENST00000412393 PRRT3Q5FWE3 981 aa8.11□□□□□ -1.11
LINC00342-201ENST00000412393 ARTNQ5T4W7 220 aa8.11□□□□□ -1.11
LINC00342-201ENST00000412393 PCMTD1Q96MG8 357 aaPredicted RBP8.11□□□□□ -1.11
LINC00342-201ENST00000412393 ZFP64Q9NPA5 681 aa8.11□□□□□ -1.11
LINC00342-201ENST00000412393 CFAP65Q6ZU64 1925 aaKnown RBP8.11□□□□□ -1.11
LINC00342-201ENST00000412393 ATXN7O15265 892 aaPredicted RBP8.1□□□□□ -1.11
LINC00342-201ENST00000412393 NKAPLQ5M9Q1 402 aa8.1□□□□□ -1.11
LINC00342-201ENST00000412393 SIRT1Q96EB6 747 aa8.1□□□□□ -1.11
LINC00342-201ENST00000412393 PLVAPQ9BX97 442 aa8.1□□□□□ -1.11
LINC00342-201ENST00000412393 ZNF142P52746 1687 aaPredicted RBP8.1□□□□□ -1.11
LINC00342-201ENST00000412393 PTPRKQ15262 1439 aa8.1□□□□□ -1.11
LINC00342-201ENST00000412393 MYO3AQ8NEV4 1616 aa8.1□□□□□ -1.11
LINC00342-201ENST00000412393 FAM135AQ9P2D6 1515 aa8.09□□□□□ -1.11
LINC00342-201ENST00000412393 TLR1Q15399 786 aa8.09□□□□□ -1.11
LINC00342-201ENST00000412393 LCE3BQ5TA77 95 aa8.09□□□□□ -1.11
LINC00342-201ENST00000412393 ZNF468Q5VIY5 522 aaPredicted RBP8.09□□□□□ -1.11
LINC00342-201ENST00000412393 TRIM11Q96F44 468 aa8.09□□□□□ -1.11
LINC00342-201ENST00000412393 GPBP1L1Q9HC44 474 aaPredicted RBP8.09□□□□□ -1.11
LINC00342-201ENST00000412393 DNMT1P26358 1616 aaKnown RBP8.09□□□□□ -1.11
LINC00342-201ENST00000412393 RNF17Q9BXT8 1623 aaKnown RBP8.09□□□□□ -1.11
LINC00342-201ENST00000412393 EIF2AK4Q9P2K8 1649 aaKnown RBP8.09□□□□□ -1.11
LINC00342-201ENST00000412393 KDM5DQ9BY66 1539 aa8.08□□□□□ -1.12
LINC00342-201ENST00000412393 CAMSAP1Q5T5Y3 1602 aa8.08□□□□□ -1.12
LINC00342-201ENST00000412393 APBA3O96018 575 aa8.08□□□□□ -1.12
LINC00342-201ENST00000412393 TNP2Q05952 138 aa8.08□□□□□ -1.12
LINC00342-201ENST00000412393 LAMC2Q13753 1193 aa8.08□□□□□ -1.12
LINC00342-201ENST00000412393 FCHSD1Q86WN1 690 aa8.08□□□□□ -1.12
LINC00342-201ENST00000412393 FBXO41Q8TF61 875 aa8.08□□□□□ -1.12
LINC00342-201ENST00000412393 NACC1Q96RE7 527 aa8.08□□□□□ -1.12
LINC00342-201ENST00000412393 KRTAP4-12Q9BQ66 201 aa8.08□□□□□ -1.12
LINC00342-201ENST00000412393 NIFKQ9BYG3 293 aaKnown RBP8.08□□□□□ -1.12
LINC00342-201ENST00000412393 CEP126Q9P2H0 1117 aa8.08□□□□□ -1.12
LINC00342-201ENST00000412393 FGD6Q6ZV73 1430 aa8.08□□□□□ -1.12
LINC00342-201ENST00000412393 CEP170BQ9Y4F5 1589 aaPredicted RBP8.08□□□□□ -1.12
LINC00342-201ENST00000412393 CEP152O94986 1710 aa8.08□□□□□ -1.12
LINC00342-201ENST00000412393 DUOX2Q9NRD8 1548 aa8.08□□□□□ -1.12
LINC00342-201ENST00000412393 ZC3H13Q5T200 1668 aaKnown RBP8.08□□□□□ -1.12
LINC00342-201ENST00000412393 TCOF1Q13428 1488 aaKnown RBP8.07□□□□□ -1.12
LINC00342-201ENST00000412393 SHANK2Q9UPX8 1470 aa8.07□□□□□ -1.12
LINC00342-201ENST00000412393 WASHC2CQ9Y4E1 1318 aa8.07□□□□□ -1.12
LINC00342-201ENST00000412393 ABCC5O15440 1437 aa8.07□□□□□ -1.12
LINC00342-201ENST00000412393 FAM157BP0CG42 384 aa8.07□□□□□ -1.12
LINC00342-201ENST00000412393 MAPTP10636 758 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms