RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 PLEKHF1Q96S99 279 aa18.85■□□□□ 0.61
HLA-DQB2-229ENST00000411527 THUMPD2Q9BTF0 503 aaKnown RBP18.85■□□□□ 0.61
HLA-DQB2-229ENST00000411527 ZBTB3Q9H5J0 574 aa18.85■□□□□ 0.61
HLA-DQB2-229ENST00000411527 ADAMTSL1Q8N6G6 1762 aa18.85■□□□□ 0.61
HLA-DQB2-229ENST00000411527 NFE2L2Q16236 605 aa18.84■□□□□ 0.61
HLA-DQB2-229ENST00000411527 MAP1SQ66K74 1059 aaPredicted RBP18.84■□□□□ 0.61
HLA-DQB2-229ENST00000411527 CNTROBQ8N137 903 aa18.84■□□□□ 0.61
HLA-DQB2-229ENST00000411527 GJA3Q9Y6H8 435 aa18.84■□□□□ 0.61
HLA-DQB2-229ENST00000411527 SNED1Q8TER0 1413 aa18.83■□□□□ 0.61
HLA-DQB2-229ENST00000411527 UBN2Q6ZU65 1347 aa18.83■□□□□ 0.61
HLA-DQB2-229ENST00000411527 HOXA10P31260 410 aaPredicted RBP18.83■□□□□ 0.6
HLA-DQB2-229ENST00000411527 EIF6P56537 245 aaKnown RBP18.83■□□□□ 0.6
HLA-DQB2-229ENST00000411527 SUSD4Q5VX71 490 aa18.83■□□□□ 0.6
HLA-DQB2-229ENST00000411527 TCERG1O14776 1098 aaKnown RBP18.82■□□□□ 0.6
HLA-DQB2-229ENST00000411527 ZNF34Q8IZ26 560 aa18.82■□□□□ 0.6
HLA-DQB2-229ENST00000411527 AIDAQ96BJ3 306 aa18.82■□□□□ 0.6
HLA-DQB2-229ENST00000411527 RBM17Q96I25 401 aaKnown RBP18.82■□□□□ 0.6
HLA-DQB2-229ENST00000411527 GRIPAP1Q4V328 841 aa18.81■□□□□ 0.6
HLA-DQB2-229ENST00000411527 CRAMP1Q96RY5 1269 aa18.81■□□□□ 0.6
HLA-DQB2-229ENST00000411527 RIC1Q4ADV7 1423 aa18.81■□□□□ 0.6
HLA-DQB2-229ENST00000411527 IBTKQ9P2D0 1353 aaPredicted RBP18.81■□□□□ 0.6
HLA-DQB2-229ENST00000411527 COL4A5P29400 1685 aa18.8■□□□□ 0.6
HLA-DQB2-229ENST00000411527 LMOD1P29536 600 aaPredicted RBP18.8■□□□□ 0.6
HLA-DQB2-229ENST00000411527 CTCFP49711 727 aaPredicted RBP18.8■□□□□ 0.6
HLA-DQB2-229ENST00000411527 DEFB115Q30KQ5 88 aa18.8■□□□□ 0.6
HLA-DQB2-229ENST00000411527 GIGYF2Q6Y7W6 1299 aaKnown RBP18.8■□□□□ 0.6
HLA-DQB2-229ENST00000411527 LARGE2Q8N3Y3 721 aa18.8■□□□□ 0.6
HLA-DQB2-229ENST00000411527 PNNQ9H307 717 aaKnown RBP18.8■□□□□ 0.6
HLA-DQB2-229ENST00000411527 PRDM10Q9NQV6 1147 aa18.8■□□□□ 0.6
HLA-DQB2-229ENST00000411527 MAPK8IP3Q9UPT6 1336 aa18.79■□□□□ 0.6
HLA-DQB2-229ENST00000411527 RASSF10A6NK89 507 aa18.79■□□□□ 0.6
HLA-DQB2-229ENST00000411527 PPEF1O14829 653 aaPredicted RBP18.79■□□□□ 0.6
HLA-DQB2-229ENST00000411527 NTSR2O95665 410 aa18.79■□□□□ 0.6
HLA-DQB2-229ENST00000411527 C3orf67Q6ZVT6 689 aa18.79■□□□□ 0.6
HLA-DQB2-229ENST00000411527 PPP1R42Q7Z4L9 355 aa18.79■□□□□ 0.6
HLA-DQB2-229ENST00000411527 SLC51AQ86UW1 340 aa18.79■□□□□ 0.6
HLA-DQB2-229ENST00000411527 ERBB4Q15303 1308 aa18.78■□□□□ 0.6
HLA-DQB2-229ENST00000411527 NLRP3Q96P20 1036 aa18.78■□□□□ 0.6
HLA-DQB2-229ENST00000411527 WBP1LQ9NX94 342 aa18.78■□□□□ 0.6
HLA-DQB2-229ENST00000411527 TSPYL4Q9UJ04 414 aa18.78■□□□□ 0.6
HLA-DQB2-229ENST00000411527 LTBP1Q14766 1721 aa18.77■□□□□ 0.6
HLA-DQB2-229ENST00000411527 EIF2S2P20042 333 aaKnown RBP18.77■□□□□ 0.6
HLA-DQB2-229ENST00000411527 EPS15P42566 896 aa18.77■□□□□ 0.6
HLA-DQB2-229ENST00000411527 SCNN1DP51172 638 aa18.77■□□□□ 0.6
HLA-DQB2-229ENST00000411527 PARP10Q53GL7 1025 aa18.77■□□□□ 0.6
HLA-DQB2-229ENST00000411527 ABT1Q9ULW3 272 aaKnown RBP18.77■□□□□ 0.6
HLA-DQB2-229ENST00000411527 NIM1KQ8IY84 436 aa18.76■□□□□ 0.59
HLA-DQB2-229ENST00000411527 TMX4Q9H1E5 349 aaPredicted RBP18.76■□□□□ 0.59
HLA-DQB2-229ENST00000411527 DDX21Q9NR30 783 aaKnown RBP eCLIP18.76■□□□□ 0.59
HLA-DQB2-229ENST00000411527 WDR33Q9C0J8 1336 aaKnown RBP18.75■□□□□ 0.59
HLA-DQB2-229ENST00000411527 PPIP5K2O43314 1243 aa18.75■□□□□ 0.59
HLA-DQB2-229ENST00000411527 LBX1P52954 281 aa18.75■□□□□ 0.59
HLA-DQB2-229ENST00000411527 FMR1Q06787 632 aaKnown RBP eCLIP18.75■□□□□ 0.59
HLA-DQB2-229ENST00000411527 PDIA6Q15084 440 aa18.75■□□□□ 0.59
HLA-DQB2-229ENST00000411527 UTP14AQ9BVJ6 771 aaKnown RBP18.75■□□□□ 0.59
HLA-DQB2-229ENST00000411527 ANXA1P04083 346 aa18.74■□□□□ 0.59
HLA-DQB2-229ENST00000411527 RIPK4P57078 832 aa18.74■□□□□ 0.59
HLA-DQB2-229ENST00000411527 AOC3Q16853 763 aa18.74■□□□□ 0.59
HLA-DQB2-229ENST00000411527 SLC10A5Q5PT55 438 aa18.74■□□□□ 0.59
HLA-DQB2-229ENST00000411527 USP50Q70EL3 339 aaPredicted RBP18.74■□□□□ 0.59
HLA-DQB2-229ENST00000411527 LRP10Q7Z4F1 713 aa18.74■□□□□ 0.59
HLA-DQB2-229ENST00000411527 ATP6V0A2Q9Y487 856 aa18.74■□□□□ 0.59
HLA-DQB2-229ENST00000411527 PROSER3Q2NL68 480 aa18.73■□□□□ 0.59
HLA-DQB2-229ENST00000411527 MAP2K1Q02750 393 aaPredicted RBP18.72■□□□□ 0.59
HLA-DQB2-229ENST00000411527 PAXIP1Q6ZW49 1069 aaPredicted RBP18.72■□□□□ 0.59
HLA-DQB2-229ENST00000411527 VPS33BQ9H267 617 aa18.72■□□□□ 0.59
HLA-DQB2-229ENST00000411527 ABCC4O15439 1325 aa18.72■□□□□ 0.59
HLA-DQB2-229ENST00000411527 TRPM7Q96QT4 1865 aa18.71■□□□□ 0.59
HLA-DQB2-229ENST00000411527 AIMP1Q12904 312 aaKnown RBP18.71■□□□□ 0.59
HLA-DQB2-229ENST00000411527 SUPT20HQ8NEM7 779 aa18.71■□□□□ 0.59
HLA-DQB2-229ENST00000411527 NECTIN2Q92692 538 aa18.71■□□□□ 0.59
HLA-DQB2-229ENST00000411527 LAMB2P55268 1798 aa18.7■□□□□ 0.58
HLA-DQB2-229ENST00000411527 TRAF5O00463 557 aa18.7■□□□□ 0.58
HLA-DQB2-229ENST00000411527 BBOX1O75936 387 aa18.7■□□□□ 0.58
HLA-DQB2-229ENST00000411527 HSPA8P11142 646 aaKnown RBP18.7■□□□□ 0.58
HLA-DQB2-229ENST00000411527 CXCL9Q07325 125 aa18.7■□□□□ 0.58
HLA-DQB2-229ENST00000411527 GRM1Q13255 1194 aa18.7■□□□□ 0.58
HLA-DQB2-229ENST00000411527 COPS6Q7L5N1 327 aa18.7■□□□□ 0.58
HLA-DQB2-229ENST00000411527 BABAM1Q9NWV8 329 aa18.7■□□□□ 0.58
HLA-DQB2-229ENST00000411527 GPRC5DQ9NZD1 345 aa18.7■□□□□ 0.58
HLA-DQB2-229ENST00000411527 ZNRF3Q9ULT6 936 aa18.7■□□□□ 0.58
HLA-DQB2-229ENST00000411527 ANKRD36CQ5JPF3 1778 aa18.7■□□□□ 0.58
HLA-DQB2-229ENST00000411527 HCLS1P14317 486 aaPredicted RBP18.69■□□□□ 0.58
HLA-DQB2-229ENST00000411527 HSP90AB3PQ58FF7 597 aa18.69■□□□□ 0.58
HLA-DQB2-229ENST00000411527 CST9Q5W186 159 aa18.69■□□□□ 0.58
HLA-DQB2-229ENST00000411527 DPP8Q6V1X1 898 aaPredicted RBP18.69■□□□□ 0.58
HLA-DQB2-229ENST00000411527 NLRP10Q86W26 655 aa18.69■□□□□ 0.58
HLA-DQB2-229ENST00000411527 SP8Q8IXZ3 490 aa18.69■□□□□ 0.58
HLA-DQB2-229ENST00000411527 XAGE3Q8WTP9 111 aa18.69■□□□□ 0.58
HLA-DQB2-229ENST00000411527 CAPNS2Q96L46 248 aa18.69■□□□□ 0.58
HLA-DQB2-229ENST00000411527 RTFDC1Q9BY42 306 aaPredicted RBP18.69■□□□□ 0.58
HLA-DQB2-229ENST00000411527 ADARB2Q9NS39 739 aaKnown RBP18.69■□□□□ 0.58
HLA-DQB2-229ENST00000411527 TMPOP42166 694 aaKnown RBP18.68■□□□□ 0.58
HLA-DQB2-229ENST00000411527 ECE1P42892 770 aa18.68■□□□□ 0.58
HLA-DQB2-229ENST00000411527 MPNDQ8N594 471 aa18.68■□□□□ 0.58
HLA-DQB2-229ENST00000411527 TRMT112Q9UI30 125 aaKnown RBP18.68■□□□□ 0.58
HLA-DQB2-229ENST00000411527 GMPSP49915 693 aaPredicted RBP18.67■□□□□ 0.58
HLA-DQB2-229ENST00000411527 LMOD3Q0VAK6 560 aa18.67■□□□□ 0.58
HLA-DQB2-229ENST00000411527 TCIRG1Q13488 830 aa18.67■□□□□ 0.58
HLA-DQB2-229ENST00000411527 CYP4F22Q6NT55 531 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms