RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 SCARF1Q14162 830 aa6.58□□□□□ -1.36
RNU2-28P-201ENST00000410457 CTC1Q2NKJ3 1217 aa6.58□□□□□ -1.36
RNU2-28P-201ENST00000410457 TSNAXIP1Q2TAA8 658 aa6.58□□□□□ -1.36
RNU2-28P-201ENST00000410457 C6orf118Q5T5N4 469 aa6.58□□□□□ -1.36
RNU2-28P-201ENST00000410457 XKR5Q6UX68 686 aa6.58□□□□□ -1.36
RNU2-28P-201ENST00000410457 BTLAQ7Z6A9 289 aa6.58□□□□□ -1.36
RNU2-28P-201ENST00000410457 ZNF280CQ8ND82 737 aa6.58□□□□□ -1.36
RNU2-28P-201ENST00000410457 HSH2DQ96JZ2 352 aa6.58□□□□□ -1.36
RNU2-28P-201ENST00000410457 CSRNP1Q96S65 589 aa6.58□□□□□ -1.36
RNU2-28P-201ENST00000410457 GGNBP2Q9H3C7 697 aa6.58□□□□□ -1.36
RNU2-28P-201ENST00000410457 SOS2Q07890 1332 aaPredicted RBP6.57□□□□□ -1.36
RNU2-28P-201ENST00000410457 SMCPP49901 116 aaPredicted RBP6.57□□□□□ -1.36
RNU2-28P-201ENST00000410457 C8orf34Q49A92 452 aa6.57□□□□□ -1.36
RNU2-28P-201ENST00000410457 PDE12Q6L8Q7 609 aaKnown RBP6.57□□□□□ -1.36
RNU2-28P-201ENST00000410457 FRMD6Q96NE9 622 aa6.57□□□□□ -1.36
RNU2-28P-201ENST00000410457 ZIC5Q96T25 663 aa6.57□□□□□ -1.36
RNU2-28P-201ENST00000410457 BACH2Q9BYV9 841 aa6.57□□□□□ -1.36
RNU2-28P-201ENST00000410457 CRISPLD1Q9H336 500 aa6.57□□□□□ -1.36
RNU2-28P-201ENST00000410457 MRS2Q9HD23 443 aa6.57□□□□□ -1.36
RNU2-28P-201ENST00000410457 TIMMDC1Q9NPL8 285 aa6.57□□□□□ -1.36
RNU2-28P-201ENST00000410457 FNDC3AQ9Y2H6 1198 aaKnown RBP6.57□□□□□ -1.36
RNU2-28P-201ENST00000410457 EIF1AYO14602 144 aaKnown RBP6.56□□□□□ -1.36
RNU2-28P-201ENST00000410457 SCAMP3O14828 347 aaKnown RBP6.56□□□□□ -1.36
RNU2-28P-201ENST00000410457 SORBS3O60504 671 aa6.56□□□□□ -1.36
RNU2-28P-201ENST00000410457 EPB42P16452 691 aa6.56□□□□□ -1.36
RNU2-28P-201ENST00000410457 MSX1P28360 303 aa6.56□□□□□ -1.36
RNU2-28P-201ENST00000410457 GNA15P30679 374 aa6.56□□□□□ -1.36
RNU2-28P-201ENST00000410457 ARSJQ5FYB0 599 aaPredicted RBP6.56□□□□□ -1.36
RNU2-28P-201ENST00000410457 KLRG1Q96E93 195 aa6.56□□□□□ -1.36
RNU2-28P-201ENST00000410457 CFHR5Q9BXR6 569 aa6.56□□□□□ -1.36
RNU2-28P-201ENST00000410457 NEUROD4Q9HD90 331 aa6.56□□□□□ -1.36
RNU2-28P-201ENST00000410457 C11orf16Q9NQ32 467 aa6.56□□□□□ -1.36
RNU2-28P-201ENST00000410457 WWC3Q9ULE0 1092 aa6.56□□□□□ -1.36
RNU2-28P-201ENST00000410457 FAM187AA6NFU0 413 aa6.55□□□□□ -1.36
RNU2-28P-201ENST00000410457 POTECB2RU33 542 aa6.55□□□□□ -1.36
RNU2-28P-201ENST00000410457 CPNE3O75131 537 aaKnown RBP6.55□□□□□ -1.36
RNU2-28P-201ENST00000410457 TYRO3Q06418 890 aa6.55□□□□□ -1.36
RNU2-28P-201ENST00000410457 PSMD2Q13200 908 aa6.55□□□□□ -1.36
RNU2-28P-201ENST00000410457 ORC1Q13415 861 aa6.55□□□□□ -1.36
RNU2-28P-201ENST00000410457 LDLRAD1Q5T700 205 aa6.55□□□□□ -1.36
RNU2-28P-201ENST00000410457 SNX29Q8TEQ0 813 aa6.55□□□□□ -1.36
RNU2-28P-201ENST00000410457 C8orf37Q96NL8 207 aa6.55□□□□□ -1.36
RNU2-28P-201ENST00000410457 RTCBQ9Y3I0 505 aaKnown RBP6.55□□□□□ -1.36
RNU2-28P-201ENST00000410457 DYRK1BQ9Y463 629 aa6.55□□□□□ -1.36
RNU2-28P-201ENST00000410457 A0A1W2PNR3 127 aa6.54□□□□□ -1.36
RNU2-28P-201ENST00000410457 FAM181BA6NEQ2 426 aa6.54□□□□□ -1.36
RNU2-28P-201ENST00000410457 TNFRSF21O75509 655 aa6.54□□□□□ -1.36
RNU2-28P-201ENST00000410457 RHOQP17081 205 aa6.54□□□□□ -1.36
RNU2-28P-201ENST00000410457 TRIP4Q15650 581 aaPredicted RBP6.54□□□□□ -1.36
RNU2-28P-201ENST00000410457 SAMD5Q5TGI4 173 aa6.54□□□□□ -1.36
RNU2-28P-201ENST00000410457 LRRC69Q6ZNQ3 347 aa6.54□□□□□ -1.36
RNU2-28P-201ENST00000410457 TRIM46Q7Z4K8 759 aa6.54□□□□□ -1.36
RNU2-28P-201ENST00000410457 NLRP8Q86W28 1048 aa6.54□□□□□ -1.36
RNU2-28P-201ENST00000410457 CRIPAKQ8N1N5 446 aa6.54□□□□□ -1.36
RNU2-28P-201ENST00000410457 SETDB2Q96T68 719 aa6.54□□□□□ -1.36
RNU2-28P-201ENST00000410457 KCNMB2Q9Y691 235 aa6.54□□□□□ -1.36
RNU2-28P-201ENST00000410457 A6NHS1 94 aa6.53□□□□□ -1.36
RNU2-28P-201ENST00000410457 IGSF3O75054 1194 aa6.53□□□□□ -1.36
RNU2-28P-201ENST00000410457 EGFRP00533 1210 aa6.53□□□□□ -1.36
RNU2-28P-201ENST00000410457 F11P03951 625 aa6.53□□□□□ -1.36
RNU2-28P-201ENST00000410457 BMP1P13497 986 aa6.53□□□□□ -1.36
RNU2-28P-201ENST00000410457 LBRQ14739 615 aaKnown RBP6.53□□□□□ -1.36
RNU2-28P-201ENST00000410457 SUZ12Q15022 739 aaKnown RBP6.53□□□□□ -1.36
RNU2-28P-201ENST00000410457 ZNF438Q7Z4V0 828 aa6.53□□□□□ -1.36
RNU2-28P-201ENST00000410457 FAM161BQ96MY7 647 aa6.53□□□□□ -1.36
RNU2-28P-201ENST00000410457 METTL5Q9NRN9 209 aaKnown RBP6.53□□□□□ -1.36
RNU2-28P-201ENST00000410457 VTI1BQ9UEU0 232 aa6.53□□□□□ -1.36
RNU2-28P-201ENST00000410457 SPG7Q9UQ90 795 aa6.53□□□□□ -1.36
RNU2-28P-201ENST00000410457 GJA3Q9Y6H8 435 aa6.53□□□□□ -1.36
RNU2-28P-201ENST00000410457 UBAP1LF5GYI3 381 aa6.52□□□□□ -1.37
RNU2-28P-201ENST00000410457 ZC3H6P61129 1189 aaKnown RBP6.52□□□□□ -1.37
RNU2-28P-201ENST00000410457 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.52□□□□□ -1.37
RNU2-28P-201ENST00000410457 PGBD3Q8N328 593 aa6.52□□□□□ -1.37
RNU2-28P-201ENST00000410457 ELP3Q9H9T3 547 aa6.52□□□□□ -1.37
RNU2-28P-201ENST00000410457 RNF19AQ9NV58 838 aa6.52□□□□□ -1.37
RNU2-28P-201ENST00000410457 AK5Q9Y6K8 562 aa6.52□□□□□ -1.37
RNU2-28P-201ENST00000410457 GIPC1O14908 333 aa6.51□□□□□ -1.37
RNU2-28P-201ENST00000410457 GRNP28799 593 aaKnown RBP6.51□□□□□ -1.37
RNU2-28P-201ENST00000410457 KCNQ4P56696 695 aa6.51□□□□□ -1.37
RNU2-28P-201ENST00000410457 HDLBPQ00341 1268 aaKnown RBP6.51□□□□□ -1.37
RNU2-28P-201ENST00000410457 CMTR1Q8N1G2 835 aaKnown RBP6.51□□□□□ -1.37
RNU2-28P-201ENST00000410457 TMEM87AQ8NBN3 555 aa6.51□□□□□ -1.37
RNU2-28P-201ENST00000410457 CRELD1Q96HD1 420 aa6.51□□□□□ -1.37
RNU2-28P-201ENST00000410457 ZFP42Q96MM3 310 aa6.51□□□□□ -1.37
RNU2-28P-201ENST00000410457 CEP63Q96MT8 703 aa6.51□□□□□ -1.37
RNU2-28P-201ENST00000410457 FOXD3Q9UJU5 478 aaPredicted RBP6.51□□□□□ -1.37
RNU2-28P-201ENST00000410457 DNMT3LQ9UJW3 386 aa6.51□□□□□ -1.37
RNU2-28P-201ENST00000410457 USP20Q9Y2K6 914 aa6.51□□□□□ -1.37
RNU2-28P-201ENST00000410457 FIGNL2A6NMB9 653 aa6.5□□□□□ -1.37
RNU2-28P-201ENST00000410457 AXIN1O15169 862 aa6.5□□□□□ -1.37
RNU2-28P-201ENST00000410457 PHACTR2O75167 634 aa6.5□□□□□ -1.37
RNU2-28P-201ENST00000410457 XYLBO75191 536 aa6.5□□□□□ -1.37
RNU2-28P-201ENST00000410457 EFHC2Q5JST6 749 aa6.5□□□□□ -1.37
RNU2-28P-201ENST00000410457 RUBCNLQ9H714 662 aa6.5□□□□□ -1.37
RNU2-28P-201ENST00000410457 ZFYVE28Q9HCC9 887 aa6.5□□□□□ -1.37
RNU2-28P-201ENST00000410457 GPAMQ9HCL2 828 aa6.5□□□□□ -1.37
RNU2-28P-201ENST00000410457 BRD7Q9NPI1 651 aa6.5□□□□□ -1.37
RNU2-28P-201ENST00000410457 SENP3-EIF4A1A0A087X0R7 540 aa6.49□□□□□ -1.37
RNU2-28P-201ENST00000410457 FAM157BP0CG42 384 aa6.49□□□□□ -1.37
RNU2-28P-201ENST00000410457 EIF4BP23588 611 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms