RNA–Protein interactions for RNA: ENST00000410055.5

PDK1-203, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-203ENST00000410055 ECHDC1Q9NTX5 307 aa19.93■□□□□ 0.78
PDK1-203ENST00000410055 LRRC37A3O60309 1634 aa19.93■□□□□ 0.78
PDK1-203ENST00000410055 JAKMIP1Q96N16 626 aaKnown RBP19.93■□□□□ 0.78
PDK1-203ENST00000410055 CHRNA2Q15822 529 aa19.92■□□□□ 0.78
PDK1-203ENST00000410055 HS1BP3Q53T59 392 aa19.92■□□□□ 0.78
PDK1-203ENST00000410055 CACNA1FO60840 1977 aa19.92■□□□□ 0.78
PDK1-203ENST00000410055 GRM8O00222 908 aa19.92■□□□□ 0.78
PDK1-203ENST00000410055 AOX1Q06278 1338 aa19.92■□□□□ 0.78
PDK1-203ENST00000410055 ADCK5Q3MIX3 580 aa19.92■□□□□ 0.78
PDK1-203ENST00000410055 TCEANC2Q96MN5 208 aa19.92■□□□□ 0.78
PDK1-203ENST00000410055 TLR7Q9NYK1 1049 aaKnown RBP19.92■□□□□ 0.78
PDK1-203ENST00000410055 CCDC83Q8IWF9 413 aa19.91■□□□□ 0.78
PDK1-203ENST00000410055 PDCL2Q8N4E4 241 aa19.91■□□□□ 0.78
PDK1-203ENST00000410055 GPATCH3Q96I76 525 aa19.91■□□□□ 0.78
PDK1-203ENST00000410055 CHRM1P11229 460 aaPredicted RBP19.91■□□□□ 0.78
PDK1-203ENST00000410055 FAM227BQ96M60 508 aa19.91■□□□□ 0.78
PDK1-203ENST00000410055 PXDNLA1KZ92 1463 aa19.9■□□□□ 0.78
PDK1-203ENST00000410055 DDX58O95786 925 aaKnown RBP19.9■□□□□ 0.78
PDK1-203ENST00000410055 USP48Q86UV5 1035 aa19.9■□□□□ 0.78
PDK1-203ENST00000410055 INTS4Q96HW7 963 aaKnown RBP19.9■□□□□ 0.78
PDK1-203ENST00000410055 MYD88Q99836 296 aa19.9■□□□□ 0.78
PDK1-203ENST00000410055 LARGE1O95461 756 aa19.9■□□□□ 0.78
PDK1-203ENST00000410055 PTMAP06454 111 aaKnown RBP19.9■□□□□ 0.78
PDK1-203ENST00000410055 COPS6Q7L5N1 327 aa19.9■□□□□ 0.78
PDK1-203ENST00000410055 EAF2Q96CJ1 260 aaPredicted RBP19.9■□□□□ 0.78
PDK1-203ENST00000410055 HYPKQ9NX55 129 aa19.9■□□□□ 0.78
PDK1-203ENST00000410055 NDUFB9Q9Y6M9 179 aa19.9■□□□□ 0.78
PDK1-203ENST00000410055 RUFY3Q7L099 469 aa19.89■□□□□ 0.78
PDK1-203ENST00000410055 XAGE3Q8WTP9 111 aa19.89■□□□□ 0.78
PDK1-203ENST00000410055 TRIM34Q9BYJ4 488 aa19.89■□□□□ 0.78
PDK1-203ENST00000410055 EDC3Q96F86 508 aaKnown RBP19.89■□□□□ 0.77
PDK1-203ENST00000410055 SMC3Q9UQE7 1217 aa19.89■□□□□ 0.77
PDK1-203ENST00000410055 ALDH1L1O75891 902 aa19.89■□□□□ 0.77
PDK1-203ENST00000410055 C17orf53Q8N3J3 647 aaPredicted RBP19.89■□□□□ 0.77
PDK1-203ENST00000410055 LINS1Q8NG48 757 aa19.89■□□□□ 0.77
PDK1-203ENST00000410055 RUFY2Q8WXA3 655 aa19.89■□□□□ 0.77
PDK1-203ENST00000410055 CNPY2Q9Y2B0 182 aa19.89■□□□□ 0.77
PDK1-203ENST00000410055 NFAT5O94916 1531 aa19.88■□□□□ 0.77
PDK1-203ENST00000410055 ADGRL3Q9HAR2 1447 aa19.88■□□□□ 0.77
PDK1-203ENST00000410055 FIBPO43427 364 aa19.88■□□□□ 0.77
PDK1-203ENST00000410055 SASH1O94885 1247 aa19.88■□□□□ 0.77
PDK1-203ENST00000410055 ZNF790Q6PG37 636 aa19.88■□□□□ 0.77
PDK1-203ENST00000410055 NECAB1Q8N987 351 aa19.88■□□□□ 0.77
PDK1-203ENST00000410055 BCL2L12Q9HB09 334 aa19.88■□□□□ 0.77
PDK1-203ENST00000410055 WDR33Q9C0J8 1336 aaKnown RBP19.88■□□□□ 0.77
PDK1-203ENST00000410055 NEXNQ0ZGT2 675 aa19.88■□□□□ 0.77
PDK1-203ENST00000410055 KAZALD1Q96I82 304 aa19.88■□□□□ 0.77
PDK1-203ENST00000410055 LIMCH1Q9UPQ0 1083 aa19.88■□□□□ 0.77
PDK1-203ENST00000410055 ATP5J2-PTCD1G3V325 749 aa19.87■□□□□ 0.77
PDK1-203ENST00000410055 PTCD1O75127 700 aaKnown RBP19.87■□□□□ 0.77
PDK1-203ENST00000410055 LRSAM1Q6UWE0 723 aa19.87■□□□□ 0.77
PDK1-203ENST00000410055 FSD1Q9BTV5 496 aa19.87■□□□□ 0.77
PDK1-203ENST00000410055 DDX21Q9NR30 783 aaKnown RBP eCLIP19.87■□□□□ 0.77
PDK1-203ENST00000410055 MBD3O95983 291 aa19.87■□□□□ 0.77
PDK1-203ENST00000410055 PDLIM2Q96JY6 352 aa19.87■□□□□ 0.77
PDK1-203ENST00000410055 DNAJC2Q99543 621 aaKnown RBP19.87■□□□□ 0.77
PDK1-203ENST00000410055 PDRG1Q9NUG6 133 aa19.87■□□□□ 0.77
PDK1-203ENST00000410055 TTC41PQ6P2S7 1318 aa19.87■□□□□ 0.77
PDK1-203ENST00000410055 ZNF496Q96IT1 587 aaPredicted RBP19.86■□□□□ 0.77
PDK1-203ENST00000410055 USP16Q9Y5T5 823 aa19.86■□□□□ 0.77
PDK1-203ENST00000410055 VPS37CA5D8V6 355 aaPredicted RBP19.86■□□□□ 0.77
PDK1-203ENST00000410055 IGKV5-2P06315 115 aa19.86■□□□□ 0.77
PDK1-203ENST00000410055 CHMP3Q9Y3E7 222 aa19.86■□□□□ 0.77
PDK1-203ENST00000410055 KIF3AQ9Y496 699 aa19.86■□□□□ 0.77
PDK1-203ENST00000410055 SYT1P21579 422 aa19.86■□□□□ 0.77
PDK1-203ENST00000410055 NMIQ13287 307 aaPredicted RBP19.86■□□□□ 0.77
PDK1-203ENST00000410055 COL9A3Q14050 684 aaPredicted RBP19.86■□□□□ 0.77
PDK1-203ENST00000410055 ERC1Q8IUD2 1116 aa19.85■□□□□ 0.77
PDK1-203ENST00000410055 TATP17735 454 aaPredicted RBP19.85■□□□□ 0.77
PDK1-203ENST00000410055 KIAA2012Q0VF49 1180 aa19.85■□□□□ 0.77
PDK1-203ENST00000410055 EPHA10Q5JZY3 1008 aa19.85■□□□□ 0.77
PDK1-203ENST00000410055 ERBB3P21860 1342 aa19.84■□□□□ 0.77
PDK1-203ENST00000410055 TTC5Q8N0Z6 440 aa19.84■□□□□ 0.77
PDK1-203ENST00000410055 TTC14Q96N46 770 aa19.84■□□□□ 0.77
PDK1-203ENST00000410055 RBM8AQ9Y5S9 174 aaKnown RBP19.84■□□□□ 0.77
PDK1-203ENST00000410055 TCHHQ07283 1943 aa19.84■□□□□ 0.77
PDK1-203ENST00000410055 STX6O43752 255 aa19.84■□□□□ 0.77
PDK1-203ENST00000410055 PDIA6Q15084 440 aa19.84■□□□□ 0.77
PDK1-203ENST00000410055 EVI5LQ96CN4 794 aa19.84■□□□□ 0.77
PDK1-203ENST00000410055 CCDC39Q9UFE4 941 aa19.84■□□□□ 0.77
PDK1-203ENST00000410055 CYP46A1Q9Y6A2 500 aa19.84■□□□□ 0.77
PDK1-203ENST00000410055 ERICH4A6NGS2 130 aa19.83■□□□□ 0.77
PDK1-203ENST00000410055 ZKSCAN1P17029 563 aaPredicted RBP19.83■□□□□ 0.77
PDK1-203ENST00000410055 GJB2P29033 226 aa19.83■□□□□ 0.77
PDK1-203ENST00000410055 PLCB2Q00722 1185 aa19.83■□□□□ 0.77
PDK1-203ENST00000410055 MTX1Q13505 466 aa19.83■□□□□ 0.77
PDK1-203ENST00000410055 UBE3BQ7Z3V4 1068 aa19.83■□□□□ 0.77
PDK1-203ENST00000410055 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.83■□□□□ 0.77
PDK1-203ENST00000410055 STK3Q13188 491 aa19.83■□□□□ 0.76
PDK1-203ENST00000410055 CHGBP05060 677 aa19.82■□□□□ 0.76
PDK1-203ENST00000410055 LARP1Q6PKG0 1096 aaKnown RBP19.82■□□□□ 0.76
PDK1-203ENST00000410055 FERMT3Q86UX7 667 aa19.82■□□□□ 0.76
PDK1-203ENST00000410055 SLC52A2Q9HAB3 445 aa19.82■□□□□ 0.76
PDK1-203ENST00000410055 HDAC5Q9UQL6 1122 aa19.82■□□□□ 0.76
PDK1-203ENST00000410055 CHD2O14647 1828 aaKnown RBP19.82■□□□□ 0.76
PDK1-203ENST00000410055 A0A0D9SFI3 127 aa19.82■□□□□ 0.76
PDK1-203ENST00000410055 CAPN2P17655 700 aa19.82■□□□□ 0.76
PDK1-203ENST00000410055 ATF3P18847 181 aa19.82■□□□□ 0.76
PDK1-203ENST00000410055 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.82■□□□□ 0.76
PDK1-203ENST00000410055 ZSCAN22P10073 491 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms