RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 ARHGEF10LQ9HCE6 1279 aa9.26□□□□□ -0.93
LSM5-203ENST00000409782 LRRC9Q6ZRR7 1453 aa9.26□□□□□ -0.93
LSM5-203ENST00000409782 KIDINS220Q9ULH0 1771 aa9.25□□□□□ -0.93
LSM5-203ENST00000409782 PRMT3O60678 531 aa9.25□□□□□ -0.93
LSM5-203ENST00000409782 TCF3P15923 654 aa9.25□□□□□ -0.93
LSM5-203ENST00000409782 CTSOP43234 321 aaPredicted RBP9.25□□□□□ -0.93
LSM5-203ENST00000409782 CLN3Q13286 438 aa9.25□□□□□ -0.93
LSM5-203ENST00000409782 FBXO33Q7Z6M2 555 aa9.25□□□□□ -0.93
LSM5-203ENST00000409782 AFAP1Q8N556 730 aa9.25□□□□□ -0.93
LSM5-203ENST00000409782 TPCN2Q8NHX9 752 aa9.25□□□□□ -0.93
LSM5-203ENST00000409782 ASB16Q96NS5 453 aa9.25□□□□□ -0.93
LSM5-203ENST00000409782 CFDP1Q9UEE9 299 aaPredicted RBP9.25□□□□□ -0.93
LSM5-203ENST00000409782 RIMS1Q86UR5 1692 aaKnown RBP9.25□□□□□ -0.93
LSM5-203ENST00000409782 FER1L4A9Z1Z3 1794 aa9.24□□□□□ -0.93
LSM5-203ENST00000409782 H3BRB1 525 aa9.24□□□□□ -0.93
LSM5-203ENST00000409782 PTCD1O75127 700 aaKnown RBP9.24□□□□□ -0.93
LSM5-203ENST00000409782 WEE1P30291 646 aa9.24□□□□□ -0.93
LSM5-203ENST00000409782 GLYCTKQ8IVS8 523 aa9.24□□□□□ -0.93
LSM5-203ENST00000409782 TUT1Q9H6E5 874 aaKnown RBP9.24□□□□□ -0.93
LSM5-203ENST00000409782 RAB6BQ9NRW1 208 aa9.24□□□□□ -0.93
LSM5-203ENST00000409782 DCTN4Q9UJW0 460 aa9.24□□□□□ -0.93
LSM5-203ENST00000409782 ATP7AQ04656 1500 aa9.24□□□□□ -0.93
LSM5-203ENST00000409782 FIGNL2A6NMB9 653 aa9.23□□□□□ -0.93
LSM5-203ENST00000409782 PSME1Q06323 249 aa9.23□□□□□ -0.93
LSM5-203ENST00000409782 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.23□□□□□ -0.93
LSM5-203ENST00000409782 CNKSR1Q969H4 720 aa9.23□□□□□ -0.93
LSM5-203ENST00000409782 C8orf37Q96NL8 207 aa9.23□□□□□ -0.93
LSM5-203ENST00000409782 PLXNC1O60486 1568 aa9.23□□□□□ -0.93
LSM5-203ENST00000409782 CAMSAP2Q08AD1 1489 aa9.22□□□□□ -0.93
LSM5-203ENST00000409782 MBD5Q9P267 1494 aa9.22□□□□□ -0.93
LSM5-203ENST00000409782 GPC1P35052 558 aa9.22□□□□□ -0.93
LSM5-203ENST00000409782 RNF144AP50876 292 aaPredicted RBP9.22□□□□□ -0.93
LSM5-203ENST00000409782 FKBP4Q02790 459 aaKnown RBP eCLIP9.22□□□□□ -0.93
LSM5-203ENST00000409782 ECM1Q16610 540 aa9.22□□□□□ -0.93
LSM5-203ENST00000409782 SLC27A3Q5K4L6 730 aa9.22□□□□□ -0.93
LSM5-203ENST00000409782 ZSCAN29Q8IWY8 852 aaPredicted RBP9.22□□□□□ -0.93
LSM5-203ENST00000409782 PRIMPOLQ96LW4 560 aa9.22□□□□□ -0.93
LSM5-203ENST00000409782 ESYT1Q9BSJ8 1104 aa9.22□□□□□ -0.93
LSM5-203ENST00000409782 BCL11AQ9H165 835 aa9.22□□□□□ -0.93
LSM5-203ENST00000409782 DNMT3LQ9UJW3 386 aa9.22□□□□□ -0.93
LSM5-203ENST00000409782 CCDC141Q6ZP82 1450 aa9.21□□□□□ -0.93
LSM5-203ENST00000409782 SFI1A8K8P3 1242 aa9.21□□□□□ -0.94
LSM5-203ENST00000409782 ABL1P00519 1130 aa9.21□□□□□ -0.94
LSM5-203ENST00000409782 SCNN1AP37088 669 aa9.21□□□□□ -0.94
LSM5-203ENST00000409782 RNF217Q8TC41 542 aa9.21□□□□□ -0.94
LSM5-203ENST00000409782 XAGE2Q96GT9 111 aa9.21□□□□□ -0.94
LSM5-203ENST00000409782 SPAG9O60271 1321 aaKnown RBP9.21□□□□□ -0.94
LSM5-203ENST00000409782 ARHGEF5Q12774 1597 aa9.2□□□□□ -0.94
LSM5-203ENST00000409782 SOBPA7XYQ1 873 aa9.2□□□□□ -0.94
LSM5-203ENST00000409782 NPR3P17342 541 aa9.2□□□□□ -0.94
LSM5-203ENST00000409782 GTF2E1P29083 439 aaPredicted RBP9.2□□□□□ -0.94
LSM5-203ENST00000409782 GDF10P55107 478 aa9.2□□□□□ -0.94
LSM5-203ENST00000409782 ZNF211Q13398 564 aaPredicted RBP9.2□□□□□ -0.94
LSM5-203ENST00000409782 RGL4Q8IZJ4 473 aa9.2□□□□□ -0.94
LSM5-203ENST00000409782 GTF3C2Q8WUA4 911 aaPredicted RBP9.2□□□□□ -0.94
LSM5-203ENST00000409782 ETNK1Q9HBU6 452 aa9.2□□□□□ -0.94
LSM5-203ENST00000409782 USP35Q9P2H5 1018 aa9.2□□□□□ -0.94
LSM5-203ENST00000409782 RTEL1-TNFRSF6BF6WH68 1400 aa9.2□□□□□ -0.94
LSM5-203ENST00000409782 MIA2Q96PC5 1412 aa9.2□□□□□ -0.94
LSM5-203ENST00000409782 ADGBQ8N7X0 1667 aa9.2□□□□□ -0.94
LSM5-203ENST00000409782 IL2RAP01589 272 aa9.19□□□□□ -0.94
LSM5-203ENST00000409782 INHAP05111 366 aa9.19□□□□□ -0.94
LSM5-203ENST00000409782 HNRNPMP52272 730 aaKnown RBP eCLIP9.19□□□□□ -0.94
LSM5-203ENST00000409782 ARHGAP4P98171 946 aa9.19□□□□□ -0.94
LSM5-203ENST00000409782 CENPCQ03188 943 aa9.19□□□□□ -0.94
LSM5-203ENST00000409782 LYSMD3Q7Z3D4 306 aa9.19□□□□□ -0.94
LSM5-203ENST00000409782 MYOM3Q5VTT5 1437 aa9.19□□□□□ -0.94
LSM5-203ENST00000409782 A2MP01023 1474 aa9.19□□□□□ -0.94
LSM5-203ENST00000409782 WASLO00401 505 aaPredicted RBP9.18□□□□□ -0.94
LSM5-203ENST00000409782 FOXO3O43524 673 aa9.18□□□□□ -0.94
LSM5-203ENST00000409782 MAPK1P28482 360 aa9.18□□□□□ -0.94
LSM5-203ENST00000409782 LMTK3Q96Q04 1460 aa9.18□□□□□ -0.94
LSM5-203ENST00000409782 CNTLNQ9NXG0 1405 aa9.18□□□□□ -0.94
LSM5-203ENST00000409782 DNMT3AQ9Y6K1 912 aaPredicted RBP9.18□□□□□ -0.94
LSM5-203ENST00000409782 ZNF644Q9H582 1327 aaPredicted RBP9.17□□□□□ -0.94
LSM5-203ENST00000409782 BACH1O14867 736 aa9.17□□□□□ -0.94
LSM5-203ENST00000409782 STAU1O95793 577 aaKnown RBP9.17□□□□□ -0.94
LSM5-203ENST00000409782 IGFBP4P22692 258 aa9.17□□□□□ -0.94
LSM5-203ENST00000409782 SCNN1DP51172 638 aa9.17□□□□□ -0.94
LSM5-203ENST00000409782 MLECQ14165 292 aa9.17□□□□□ -0.94
LSM5-203ENST00000409782 PRICKLE2Q7Z3G6 844 aa9.17□□□□□ -0.94
LSM5-203ENST00000409782 HELQQ8TDG4 1101 aa9.17□□□□□ -0.94
LSM5-203ENST00000409782 MROH2AA6NES4 1674 aa9.16□□□□□ -0.94
LSM5-203ENST00000409782 MAST1Q9Y2H9 1570 aa9.16□□□□□ -0.94
LSM5-203ENST00000409782 FKBP5Q13451 457 aaPredicted RBP9.16□□□□□ -0.94
LSM5-203ENST00000409782 TLR1Q15399 786 aa9.16□□□□□ -0.94
LSM5-203ENST00000409782 TMEM214Q6NUQ4 689 aaKnown RBP9.16□□□□□ -0.94
LSM5-203ENST00000409782 ZSCAN10Q96SZ4 725 aaPredicted RBP9.16□□□□□ -0.94
LSM5-203ENST00000409782 HINFPQ9BQA5 517 aa9.16□□□□□ -0.94
LSM5-203ENST00000409782 RBCK1Q9BYM8 510 aa9.16□□□□□ -0.94
LSM5-203ENST00000409782 GRIP2Q9C0E4 1043 aa9.16□□□□□ -0.94
LSM5-203ENST00000409782 SEPT3Q9UH03 358 aa9.16□□□□□ -0.94
LSM5-203ENST00000409782 SERTAD1Q9UHV2 236 aa9.16□□□□□ -0.94
LSM5-203ENST00000409782 FAM135AQ9P2D6 1515 aa9.15□□□□□ -0.94
LSM5-203ENST00000409782 TMEM229AB2RXF0 380 aa9.15□□□□□ -0.94
LSM5-203ENST00000409782 GAS2L2Q8NHY3 880 aa9.15□□□□□ -0.94
LSM5-203ENST00000409782 SHANK2Q9UPX8 1470 aa9.15□□□□□ -0.95
LSM5-203ENST00000409782 PREX1Q8TCU6 1659 aa9.14□□□□□ -0.95
LSM5-203ENST00000409782 RECKO95980 971 aa9.14□□□□□ -0.95
LSM5-203ENST00000409782 PTSQ03393 145 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms