RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 COPS6Q7L5N1 327 aa9.85□□□□□ -0.83
SNX13-201ENST00000409076 XAGE3Q8WTP9 111 aa9.85□□□□□ -0.83
SNX13-201ENST00000409076 CGNQ9P2M7 1197 aaKnown RBP9.85□□□□□ -0.83
SNX13-201ENST00000409076 TCHHQ07283 1943 aa9.84□□□□□ -0.83
SNX13-201ENST00000409076 PIK3R4Q99570 1358 aa9.84□□□□□ -0.83
SNX13-201ENST00000409076 SHROOM2Q13796 1616 aa9.84□□□□□ -0.83
SNX13-201ENST00000409076 MAP2P11137 1827 aaKnown RBP9.84□□□□□ -0.83
SNX13-201ENST00000409076 TTC5Q8N0Z6 440 aa9.84□□□□□ -0.83
SNX13-201ENST00000409076 ATP2B3Q16720 1220 aa9.84□□□□□ -0.83
SNX13-201ENST00000409076 CCDC73Q6ZRK6 1079 aa9.84□□□□□ -0.83
SNX13-201ENST00000409076 MTMR6Q9Y217 621 aa9.84□□□□□ -0.83
SNX13-201ENST00000409076 TSPOAP1O95153 1857 aa9.84□□□□□ -0.83
SNX13-201ENST00000409076 MARCKSP29966 332 aaPredicted RBP9.84□□□□□ -0.83
SNX13-201ENST00000409076 BRPF1P55201 1214 aaPredicted RBP9.83□□□□□ -0.84
SNX13-201ENST00000409076 RNF20Q5VTR2 975 aa9.83□□□□□ -0.84
SNX13-201ENST00000409076 NFATC2IPQ8NCF5 419 aa9.83□□□□□ -0.84
SNX13-201ENST00000409076 LSG1Q9H089 658 aaKnown RBP9.83□□□□□ -0.84
SNX13-201ENST00000409076 CBX8Q9HC52 389 aa9.83□□□□□ -0.84
SNX13-201ENST00000409076 ADGRB1O14514 1584 aa9.83□□□□□ -0.84
SNX13-201ENST00000409076 RAD50Q92878 1312 aa9.83□□□□□ -0.84
SNX13-201ENST00000409076 ZFYVE9O95405 1425 aa9.83□□□□□ -0.84
SNX13-201ENST00000409076 NCOA3Q9Y6Q9 1424 aa9.83□□□□□ -0.84
SNX13-201ENST00000409076 A0A1B0GVL5 298 aa9.83□□□□□ -0.84
SNX13-201ENST00000409076 CPLX1O14810 134 aa9.83□□□□□ -0.84
SNX13-201ENST00000409076 TFCP2Q12800 502 aa9.83□□□□□ -0.84
SNX13-201ENST00000409076 ORAI2Q96SN7 254 aa9.83□□□□□ -0.84
SNX13-201ENST00000409076 DBNDD2Q9BQY9 259 aa9.83□□□□□ -0.84
SNX13-201ENST00000409076 SRCAPQ6ZRS2 3230 aa9.83□□□□□ -0.84
SNX13-201ENST00000409076 PES1O00541 588 aaKnown RBP9.83□□□□□ -0.84
SNX13-201ENST00000409076 SPECC1Q5M775 1068 aa9.83□□□□□ -0.84
SNX13-201ENST00000409076 GPIHBP1Q8IV16 184 aa9.83□□□□□ -0.84
SNX13-201ENST00000409076 CCDC112Q8NEF3 446 aa9.83□□□□□ -0.84
SNX13-201ENST00000409076 A0A087WZG4 1122 aa9.82□□□□□ -0.84
SNX13-201ENST00000409076 KINO60870 393 aaKnown RBP9.82□□□□□ -0.84
SNX13-201ENST00000409076 AOPEPQ8N6M6 819 aa9.82□□□□□ -0.84
SNX13-201ENST00000409076 PI4K2BQ8TCG2 481 aa9.82□□□□□ -0.84
SNX13-201ENST00000409076 CD163L1Q9NR16 1453 aa9.82□□□□□ -0.84
SNX13-201ENST00000409076 EDC4Q6P2E9 1401 aaKnown RBP9.82□□□□□ -0.84
SNX13-201ENST00000409076 DYNC1I1O14576 645 aa9.82□□□□□ -0.84
SNX13-201ENST00000409076 SLC27A2O14975 620 aa9.82□□□□□ -0.84
SNX13-201ENST00000409076 POLR3GO15318 223 aaPredicted RBP9.82□□□□□ -0.84
SNX13-201ENST00000409076 CCAR1Q8IX12 1150 aaKnown RBP9.82□□□□□ -0.84
SNX13-201ENST00000409076 FSIP1Q8NA03 581 aa9.82□□□□□ -0.84
SNX13-201ENST00000409076 RAPGEF4Q8WZA2 1011 aa9.82□□□□□ -0.84
SNX13-201ENST00000409076 STRN4Q9NRL3 753 aa9.82□□□□□ -0.84
SNX13-201ENST00000409076 ARHGEF40Q8TER5 1519 aa9.82□□□□□ -0.84
SNX13-201ENST00000409076 STK38Q15208 465 aa9.82□□□□□ -0.84
SNX13-201ENST00000409076 HYPKQ9NX55 129 aa9.82□□□□□ -0.84
SNX13-201ENST00000409076 ADGRB3O60242 1522 aa9.82□□□□□ -0.84
SNX13-201ENST00000409076 CCDC171Q6TFL3 1326 aa9.82□□□□□ -0.84
SNX13-201ENST00000409076 CFAP74Q9C0B2 1584 aa9.81□□□□□ -0.84
SNX13-201ENST00000409076 IBTKQ9P2D0 1353 aaPredicted RBP9.81□□□□□ -0.84
SNX13-201ENST00000409076 VPS53Q5VIR6 699 aa9.81□□□□□ -0.84
SNX13-201ENST00000409076 MYO3AQ8NEV4 1616 aa9.81□□□□□ -0.84
SNX13-201ENST00000409076 GPTP24298 496 aa9.81□□□□□ -0.84
SNX13-201ENST00000409076 ZBTB22O15209 634 aa9.81□□□□□ -0.84
SNX13-201ENST00000409076 ZNF500O60304 480 aaPredicted RBP9.81□□□□□ -0.84
SNX13-201ENST00000409076 LMOD1P29536 600 aaPredicted RBP9.81□□□□□ -0.84
SNX13-201ENST00000409076 KCNF1Q9H3M0 494 aa9.81□□□□□ -0.84
SNX13-201ENST00000409076 IQSEC3Q9UPP2 1182 aaPredicted RBP9.81□□□□□ -0.84
SNX13-201ENST00000409076 DDX58O95786 925 aaKnown RBP9.8□□□□□ -0.84
SNX13-201ENST00000409076 PSMA5P28066 241 aa9.8□□□□□ -0.84
SNX13-201ENST00000409076 PPARDQ03181 441 aa9.8□□□□□ -0.84
SNX13-201ENST00000409076 PLEKHO1Q53GL0 409 aaPredicted RBP9.8□□□□□ -0.84
SNX13-201ENST00000409076 HSP90AB4PQ58FF6 505 aa9.8□□□□□ -0.84
SNX13-201ENST00000409076 EPHA10Q5JZY3 1008 aa9.8□□□□□ -0.84
SNX13-201ENST00000409076 TMC6Q7Z403 805 aa9.8□□□□□ -0.84
SNX13-201ENST00000409076 COL3A1P02461 1466 aaPredicted RBP9.8□□□□□ -0.84
SNX13-201ENST00000409076 PTPRMP28827 1452 aa9.8□□□□□ -0.84
SNX13-201ENST00000409076 PNPLA6Q8IY17 1366 aa9.8□□□□□ -0.84
SNX13-201ENST00000409076 USP27XA6NNY8 438 aa9.8□□□□□ -0.84
SNX13-201ENST00000409076 LMBR1LQ6UX01 489 aa9.8□□□□□ -0.84
SNX13-201ENST00000409076 NFXL1Q6ZNB6 911 aa9.8□□□□□ -0.84
SNX13-201ENST00000409076 PDLIM2Q96JY6 352 aa9.8□□□□□ -0.84
SNX13-201ENST00000409076 MYL10Q9BUA6 226 aa9.8□□□□□ -0.84
SNX13-201ENST00000409076 PHF8Q9UPP1 1060 aa9.8□□□□□ -0.84
SNX13-201ENST00000409076 RPAP1Q9BWH6 1393 aaPredicted RBP9.8□□□□□ -0.84
SNX13-201ENST00000409076 KIDINS220Q9ULH0 1771 aa9.8□□□□□ -0.84
SNX13-201ENST00000409076 COBLO75128 1261 aa9.8□□□□□ -0.84
SNX13-201ENST00000409076 CUL4AQ13619 759 aa9.8□□□□□ -0.84
SNX13-201ENST00000409076 CPLX3Q8WVH0 158 aa9.8□□□□□ -0.84
SNX13-201ENST00000409076 GTF3C6Q969F1 213 aa9.8□□□□□ -0.84
SNX13-201ENST00000409076 RNF216Q9NWF9 866 aaPredicted RBP9.8□□□□□ -0.84
SNX13-201ENST00000409076 DBF4Q9UBU7 674 aaPredicted RBP9.8□□□□□ -0.84
SNX13-201ENST00000409076 GRM8O00222 908 aa9.79□□□□□ -0.84
SNX13-201ENST00000409076 EIF4A1P60842 406 aaKnown RBP9.79□□□□□ -0.84
SNX13-201ENST00000409076 C11orf57Q6ZUT1 292 aaPredicted RBP9.79□□□□□ -0.84
SNX13-201ENST00000409076 ANKRD24Q8TF21 1146 aa9.79□□□□□ -0.84
SNX13-201ENST00000409076 NEK1Q96PY6 1258 aa9.79□□□□□ -0.84
SNX13-201ENST00000409076 ST7Q9NRC1 585 aa9.79□□□□□ -0.84
SNX13-201ENST00000409076 VIRMAQ69YN4 1812 aaKnown RBP9.79□□□□□ -0.84
SNX13-201ENST00000409076 VGLL3A8MV65 326 aa9.79□□□□□ -0.84
SNX13-201ENST00000409076 CDK11BP21127 795 aaKnown RBP9.79□□□□□ -0.84
SNX13-201ENST00000409076 PI16Q6UXB8 463 aa9.79□□□□□ -0.84
SNX13-201ENST00000409076 MYRIPQ8NFW9 859 aa9.79□□□□□ -0.84
SNX13-201ENST00000409076 HELBQ8NG08 1087 aaPredicted RBP9.79□□□□□ -0.84
SNX13-201ENST00000409076 FAM200AQ8TCP9 573 aa9.79□□□□□ -0.84
SNX13-201ENST00000409076 SSH3Q8TE77 659 aa9.79□□□□□ -0.84
SNX13-201ENST00000409076 FLT4P35916 1363 aa9.79□□□□□ -0.84
SNX13-201ENST00000409076 BEND3Q5T5X7 828 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms