RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 MRPS27Q92552 414 aaKnown RBP14.87□□□□□ -0.03
RNF43-201ENST00000407977 ABCF2Q9UG63 623 aa14.87□□□□□ -0.03
RNF43-201ENST00000407977 HMGB2P26583 209 aaKnown RBP14.87□□□□□ -0.03
RNF43-201ENST00000407977 CCT2P78371 535 aaKnown RBP14.87□□□□□ -0.03
RNF43-201ENST00000407977 STXBP4Q6ZWJ1 553 aa14.87□□□□□ -0.03
RNF43-201ENST00000407977 MKNK2Q9HBH9 465 aa14.87□□□□□ -0.03
RNF43-201ENST00000407977 RSPH14Q9UHP6 348 aa14.87□□□□□ -0.03
RNF43-201ENST00000407977 EBAG9O00559 213 aa14.87□□□□□ -0.03
RNF43-201ENST00000407977 FLIIQ13045 1269 aa14.87□□□□□ -0.03
RNF43-201ENST00000407977 TOM1L2Q6ZVM7 507 aa14.87□□□□□ -0.03
RNF43-201ENST00000407977 USP48Q86UV5 1035 aa14.87□□□□□ -0.03
RNF43-201ENST00000407977 NUDT16Q96DE0 195 aaKnown RBP14.87□□□□□ -0.03
RNF43-201ENST00000407977 KIF5BP33176 963 aa14.86□□□□□ -0.03
RNF43-201ENST00000407977 UBA7P41226 1012 aa14.86□□□□□ -0.03
RNF43-201ENST00000407977 CCDC8Q9H0W5 538 aaPredicted RBP14.86□□□□□ -0.03
RNF43-201ENST00000407977 MINDY4BA8MYZ0 360 aa14.86□□□□□ -0.03
RNF43-201ENST00000407977 MATR3P43243 847 aaKnown RBP eCLIP14.86□□□□□ -0.039e-7■■■□□ 15.7
RNF43-201ENST00000407977 ARFGAP2Q8N6H7 521 aa14.86□□□□□ -0.03
RNF43-201ENST00000407977 CTNNBL1Q8WYA6 563 aaPredicted RBP14.86□□□□□ -0.03
RNF43-201ENST00000407977 CAPN2P17655 700 aa14.86□□□□□ -0.03
RNF43-201ENST00000407977 KIAA0753Q2KHM9 967 aa14.86□□□□□ -0.03
RNF43-201ENST00000407977 PIBF1Q8WXW3 757 aa14.86□□□□□ -0.03
RNF43-201ENST00000407977 MAP3K1Q13233 1512 aa14.86□□□□□ -0.03
RNF43-201ENST00000407977 NCOA7Q8NI08 942 aa14.86□□□□□ -0.03
RNF43-201ENST00000407977 PRG4Q92954 1404 aaPredicted RBP14.86□□□□□ -0.03
RNF43-201ENST00000407977 DNA2P51530 1060 aa14.85□□□□□ -0.03
RNF43-201ENST00000407977 DDX54Q8TDD1 881 aaKnown RBP14.85□□□□□ -0.03
RNF43-201ENST00000407977 FBF1Q8TES7 1133 aa14.85□□□□□ -0.03
RNF43-201ENST00000407977 PANK2Q9BZ23 570 aa14.85□□□□□ -0.03
RNF43-201ENST00000407977 CTAGE9A4FU28 777 aa14.85□□□□□ -0.03
RNF43-201ENST00000407977 NOP2P46087 812 aaKnown RBP14.85□□□□□ -0.03
RNF43-201ENST00000407977 CYB5RLQ6IPT4 315 aa14.85□□□□□ -0.03
RNF43-201ENST00000407977 TMX1Q9H3N1 280 aa14.85□□□□□ -0.03
RNF43-201ENST00000407977 AQRO60306 1485 aaKnown RBP eCLIP14.85□□□□□ -0.039e-8■■■■□ 23.6
RNF43-201ENST00000407977 IFIT5Q13325 482 aaKnown RBP14.85□□□□□ -0.03
RNF43-201ENST00000407977 MCM6Q14566 821 aa14.85□□□□□ -0.03
RNF43-201ENST00000407977 PROSER2Q86WR7 435 aaPredicted RBP14.85□□□□□ -0.03
RNF43-201ENST00000407977 ANKS4BQ8N8V4 417 aa14.85□□□□□ -0.03
RNF43-201ENST00000407977 F13A1P00488 732 aa14.85□□□□□ -0.03
RNF43-201ENST00000407977 TERF1P54274 439 aa14.85□□□□□ -0.03
RNF43-201ENST00000407977 ZSWIM4Q9H7M6 989 aa14.85□□□□□ -0.03
RNF43-201ENST00000407977 PRPHP41219 470 aa14.85□□□□□ -0.03
RNF43-201ENST00000407977 KRT83P78385 493 aa14.85□□□□□ -0.03
RNF43-201ENST00000407977 MEX3CQ5U5Q3 659 aaKnown RBP14.85□□□□□ -0.03
RNF43-201ENST00000407977 INTS4Q96HW7 963 aaKnown RBP14.85□□□□□ -0.03
RNF43-201ENST00000407977 SELENOOQ9BVL4 669 aa14.85□□□□□ -0.03
RNF43-201ENST00000407977 TACC1O75410 805 aa14.84□□□□□ -0.03
RNF43-201ENST00000407977 METAP2P50579 478 aaKnown RBP eCLIP14.84□□□□□ -0.03
RNF43-201ENST00000407977 C8orf34Q49A92 452 aa14.84□□□□□ -0.03
RNF43-201ENST00000407977 ANKRD24Q8TF21 1146 aa14.84□□□□□ -0.03
RNF43-201ENST00000407977 TTC14Q96N46 770 aa14.84□□□□□ -0.03
RNF43-201ENST00000407977 SYNJ1O43426 1573 aa14.84□□□□□ -0.03
RNF43-201ENST00000407977 SLC5A1P13866 664 aa14.84□□□□□ -0.03
RNF43-201ENST00000407977 NBPF11Q86T75 865 aa14.84□□□□□ -0.03
RNF43-201ENST00000407977 NPHP3Q7Z494 1330 aa14.84□□□□□ -0.03
RNF43-201ENST00000407977 F6X3S4 739 aa14.84□□□□□ -0.03
RNF43-201ENST00000407977 SDSP20132 328 aa14.84□□□□□ -0.03
RNF43-201ENST00000407977 PRIM1P49642 420 aaKnown RBP14.84□□□□□ -0.03
RNF43-201ENST00000407977 MYD88Q99836 296 aa14.84□□□□□ -0.03
RNF43-201ENST00000407977 TTC21AQ8NDW8 1320 aa14.84□□□□□ -0.03
RNF43-201ENST00000407977 MPHOSPH10O00566 681 aaKnown RBP14.83□□□□□ -0.03
RNF43-201ENST00000407977 POLR3DP05423 398 aaPredicted RBP14.83□□□□□ -0.03
RNF43-201ENST00000407977 SYT1P21579 422 aa14.83□□□□□ -0.03
RNF43-201ENST00000407977 CTNNA2P26232 953 aa14.83□□□□□ -0.03
RNF43-201ENST00000407977 ZNF830Q96NB3 372 aaPredicted RBP14.83□□□□□ -0.03
RNF43-201ENST00000407977 DACT1Q9NYF0 836 aa14.83□□□□□ -0.03
RNF43-201ENST00000407977 RANBP6O60518 1105 aaKnown RBP14.83□□□□□ -0.04
RNF43-201ENST00000407977 NBPF7P0C2Y1 421 aaPredicted RBP14.83□□□□□ -0.04
RNF43-201ENST00000407977 PPP4R3AQ6IN85 833 aa14.83□□□□□ -0.04
RNF43-201ENST00000407977 ZNF444Q8N0Y2 327 aaPredicted RBP14.83□□□□□ -0.04
RNF43-201ENST00000407977 TRIM47Q96LD4 638 aa14.83□□□□□ -0.04
RNF43-201ENST00000407977 UBA5Q9GZZ9 404 aa14.83□□□□□ -0.04
RNF43-201ENST00000407977 MIS18AQ9NYP9 233 aa14.83□□□□□ -0.04
RNF43-201ENST00000407977 CNPY2Q9Y2B0 182 aa14.83□□□□□ -0.04
RNF43-201ENST00000407977 PIK3R4Q99570 1358 aa14.83□□□□□ -0.04
RNF43-201ENST00000407977 TTC31Q49AM3 519 aaPredicted RBP14.83□□□□□ -0.04
RNF43-201ENST00000407977 TMEM67Q5HYA8 995 aa14.83□□□□□ -0.04
RNF43-201ENST00000407977 ZSCAN29Q8IWY8 852 aaPredicted RBP14.83□□□□□ -0.04
RNF43-201ENST00000407977 CCDC77Q9BR77 488 aa14.83□□□□□ -0.04
RNF43-201ENST00000407977 EHMT1Q9H9B1 1298 aa14.83□□□□□ -0.04
RNF43-201ENST00000407977 LIG1P18858 919 aa14.83□□□□□ -0.04
RNF43-201ENST00000407977 ESYT1Q9BSJ8 1104 aa14.83□□□□□ -0.04
RNF43-201ENST00000407977 RASAL2Q9UJF2 1139 aa14.83□□□□□ -0.04
RNF43-201ENST00000407977 RALGAPBQ86X10 1494 aa14.83□□□□□ -0.04
RNF43-201ENST00000407977 TTC21BQ7Z4L5 1316 aa14.82□□□□□ -0.04
RNF43-201ENST00000407977 TTC12Q9H892 705 aaPredicted RBP14.82□□□□□ -0.04
RNF43-201ENST00000407977 HOMER2Q9NSB8 354 aa14.82□□□□□ -0.04
RNF43-201ENST00000407977 ZNF652Q9Y2D9 606 aa14.82□□□□□ -0.04
RNF43-201ENST00000407977 KRT86O43790 486 aa14.82□□□□□ -0.04
RNF43-201ENST00000407977 TYRO3Q06418 890 aa14.82□□□□□ -0.04
RNF43-201ENST00000407977 MSL1Q68DK7 614 aa14.82□□□□□ -0.04
RNF43-201ENST00000407977 PRPF4BQ13523 1007 aaKnown RBP14.82□□□□□ -0.04
RNF43-201ENST00000407977 CCDC121Q6ZUS5 278 aa14.82□□□□□ -0.04
RNF43-201ENST00000407977 STRN4Q9NRL3 753 aa14.82□□□□□ -0.04
RNF43-201ENST00000407977 RPRD2Q5VT52 1461 aaKnown RBP14.82□□□□□ -0.04
RNF43-201ENST00000407977 TMTC2Q8N394 836 aa14.82□□□□□ -0.04
RNF43-201ENST00000407977 OTUD6BQ8N6M0 293 aa14.82□□□□□ -0.04
RNF43-201ENST00000407977 ATRIPQ8WXE1 791 aa14.82□□□□□ -0.04
RNF43-201ENST00000407977 CUL5Q93034 780 aa14.82□□□□□ -0.04
RNF43-201ENST00000407977 ZFYP08048 801 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms