RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 CRY2Q49AN0 593 aa16.32■□□□□ 0.2
APOBEC3B-204ENST00000407298 RPGRQ92834 1020 aaKnown RBP16.32■□□□□ 0.2
APOBEC3B-204ENST00000407298 BEGAINQ9BUH8 593 aa16.32■□□□□ 0.2
APOBEC3B-204ENST00000407298 TMX4Q9H1E5 349 aaPredicted RBP16.32■□□□□ 0.2
APOBEC3B-204ENST00000407298 GJA3Q9Y6H8 435 aa16.32■□□□□ 0.2
APOBEC3B-204ENST00000407298 ECE1P42892 770 aa16.31■□□□□ 0.2
APOBEC3B-204ENST00000407298 KIF6Q6ZMV9 814 aa16.31■□□□□ 0.2
APOBEC3B-204ENST00000407298 DDX21Q9NR30 783 aaKnown RBP eCLIP16.31■□□□□ 0.2
APOBEC3B-204ENST00000407298 HOXA10P31260 410 aaPredicted RBP16.3■□□□□ 0.2
APOBEC3B-204ENST00000407298 LARGE2Q8N3Y3 721 aa16.3■□□□□ 0.2
APOBEC3B-204ENST00000407298 RBM17Q96I25 401 aaKnown RBP16.3■□□□□ 0.2
APOBEC3B-204ENST00000407298 ADAMTSL1Q8N6G6 1762 aa16.29■□□□□ 0.2
APOBEC3B-204ENST00000407298 HSPA8P11142 646 aaKnown RBP16.29■□□□□ 0.2
APOBEC3B-204ENST00000407298 DCTN1Q14203 1278 aa16.29■□□□□ 0.2
APOBEC3B-204ENST00000407298 USP50Q70EL3 339 aaPredicted RBP16.29■□□□□ 0.2
APOBEC3B-204ENST00000407298 CRAMP1Q96RY5 1269 aa16.29■□□□□ 0.2
APOBEC3B-204ENST00000407298 VPS33BQ9H267 617 aa16.29■□□□□ 0.2
APOBEC3B-204ENST00000407298 MAP3K15Q6ZN16 1313 aa16.28■□□□□ 0.2
APOBEC3B-204ENST00000407298 NUTM1Q86Y26 1132 aa16.28■□□□□ 0.2
APOBEC3B-204ENST00000407298 NGEFQ8N5V2 710 aa16.28■□□□□ 0.2
APOBEC3B-204ENST00000407298 IBTKQ9P2D0 1353 aaPredicted RBP16.27■□□□□ 0.2
APOBEC3B-204ENST00000407298 PAXIP1Q6ZW49 1069 aaPredicted RBP16.27■□□□□ 0.2
APOBEC3B-204ENST00000407298 NIM1KQ8IY84 436 aa16.27■□□□□ 0.2
APOBEC3B-204ENST00000407298 ABHD8Q96I13 439 aa16.27■□□□□ 0.2
APOBEC3B-204ENST00000407298 PPP2R1AP30153 589 aa16.26■□□□□ 0.19
APOBEC3B-204ENST00000407298 PPP1R42Q7Z4L9 355 aa16.26■□□□□ 0.19
APOBEC3B-204ENST00000407298 CAPNS2Q96L46 248 aa16.26■□□□□ 0.19
APOBEC3B-204ENST00000407298 GPR101Q96P66 508 aaPredicted RBP16.26■□□□□ 0.19
APOBEC3B-204ENST00000407298 MIS18AQ9NYP9 233 aa16.26■□□□□ 0.19
APOBEC3B-204ENST00000407298 RRP7AQ9Y3A4 280 aaKnown RBP16.26■□□□□ 0.19
APOBEC3B-204ENST00000407298 RIC1Q4ADV7 1423 aa16.26■□□□□ 0.19
APOBEC3B-204ENST00000407298 PPEF1O14829 653 aaPredicted RBP16.25■□□□□ 0.19
APOBEC3B-204ENST00000407298 EPS15P42566 896 aa16.25■□□□□ 0.19
APOBEC3B-204ENST00000407298 SCNN1DP51172 638 aa16.25■□□□□ 0.19
APOBEC3B-204ENST00000407298 SUPT20HQ8NEM7 779 aa16.25■□□□□ 0.19
APOBEC3B-204ENST00000407298 NLRP3Q96P20 1036 aa16.25■□□□□ 0.19
APOBEC3B-204ENST00000407298 SNED1Q8TER0 1413 aa16.25■□□□□ 0.19
APOBEC3B-204ENST00000407298 ABCC12Q96J65 1359 aa16.25■□□□□ 0.19
APOBEC3B-204ENST00000407298 MAP2K2P36507 400 aa16.24■□□□□ 0.19
APOBEC3B-204ENST00000407298 PARP10Q53GL7 1025 aa16.24■□□□□ 0.19
APOBEC3B-204ENST00000407298 ADARB2Q9NS39 739 aaKnown RBP16.24■□□□□ 0.19
APOBEC3B-204ENST00000407298 PPIP5K2O43314 1243 aa16.23■□□□□ 0.19
APOBEC3B-204ENST00000407298 CA12O43570 354 aa16.23■□□□□ 0.19
APOBEC3B-204ENST00000407298 MYL6BP14649 208 aa16.23■□□□□ 0.19
APOBEC3B-204ENST00000407298 GPTP24298 496 aa16.23■□□□□ 0.19
APOBEC3B-204ENST00000407298 EIF4A1P60842 406 aaKnown RBP16.23■□□□□ 0.19
APOBEC3B-204ENST00000407298 SUSD4Q5VX71 490 aa16.23■□□□□ 0.19
APOBEC3B-204ENST00000407298 TTLL7Q6ZT98 887 aa16.23■□□□□ 0.19
APOBEC3B-204ENST00000407298 ZNF34Q8IZ26 560 aa16.23■□□□□ 0.19
APOBEC3B-204ENST00000407298 PNNQ9H307 717 aaKnown RBP16.23■□□□□ 0.19
APOBEC3B-204ENST00000407298 TLL2Q9Y6L7 1015 aa16.23■□□□□ 0.19
APOBEC3B-204ENST00000407298 ERBB4Q15303 1308 aa16.22■□□□□ 0.19
APOBEC3B-204ENST00000407298 GRM1Q13255 1194 aa16.22■□□□□ 0.19
APOBEC3B-204ENST00000407298 CYP4F22Q6NT55 531 aa16.22■□□□□ 0.19
APOBEC3B-204ENST00000407298 GIGYF2Q6Y7W6 1299 aaKnown RBP16.22■□□□□ 0.19
APOBEC3B-204ENST00000407298 ZBTB3Q9H5J0 574 aa16.22■□□□□ 0.19
APOBEC3B-204ENST00000407298 ATP6V0A2Q9Y487 856 aa16.22■□□□□ 0.19
APOBEC3B-204ENST00000407298 NUP98P52948 1817 aa16.22■□□□□ 0.19
APOBEC3B-204ENST00000407298 UBN2Q6ZU65 1347 aa16.21■□□□□ 0.19
APOBEC3B-204ENST00000407298 LAMB4A4D0S4 1761 aa16.21■□□□□ 0.19
APOBEC3B-204ENST00000407298 TCERG1O14776 1098 aaKnown RBP16.21■□□□□ 0.19
APOBEC3B-204ENST00000407298 NTSR2O95665 410 aa16.21■□□□□ 0.19
APOBEC3B-204ENST00000407298 CST9Q5W186 159 aa16.21■□□□□ 0.19
APOBEC3B-204ENST00000407298 GPRC5DQ9NZD1 345 aa16.21■□□□□ 0.19
APOBEC3B-204ENST00000407298 ZNRF3Q9ULT6 936 aa16.21■□□□□ 0.19
APOBEC3B-204ENST00000407298 BBOX1O75936 387 aa16.2■□□□□ 0.18
APOBEC3B-204ENST00000407298 HHIPL1Q96JK4 782 aa16.2■□□□□ 0.18
APOBEC3B-204ENST00000407298 UTP14AQ9BVJ6 771 aaKnown RBP16.2■□□□□ 0.18
APOBEC3B-204ENST00000407298 CDHR2Q9BYE9 1310 aa16.19■□□□□ 0.18
APOBEC3B-204ENST00000407298 TRPM7Q96QT4 1865 aa16.19■□□□□ 0.18
APOBEC3B-204ENST00000407298 CCDC85CA6NKD9 419 aa16.19■□□□□ 0.18
APOBEC3B-204ENST00000407298 TRAF5O00463 557 aa16.19■□□□□ 0.18
APOBEC3B-204ENST00000407298 TNIP1Q15025 636 aa16.19■□□□□ 0.18
APOBEC3B-204ENST00000407298 AOC3Q16853 763 aa16.19■□□□□ 0.18
APOBEC3B-204ENST00000407298 FAM161AQ3B820 660 aa16.19■□□□□ 0.18
APOBEC3B-204ENST00000407298 SLC10A5Q5PT55 438 aa16.19■□□□□ 0.18
APOBEC3B-204ENST00000407298 ZC3H15Q8WU90 426 aaKnown RBP16.19■□□□□ 0.18
APOBEC3B-204ENST00000407298 RTFDC1Q9BY42 306 aaPredicted RBP16.19■□□□□ 0.18
APOBEC3B-204ENST00000407298 CELF2O95319 508 aaKnown RBP16.18■□□□□ 0.18
APOBEC3B-204ENST00000407298 MLLT1Q03111 559 aaPredicted RBP16.18■□□□□ 0.18
APOBEC3B-204ENST00000407298 FMR1Q06787 632 aaKnown RBP eCLIP16.18■□□□□ 0.18
APOBEC3B-204ENST00000407298 CXCL9Q07325 125 aa16.18■□□□□ 0.18
APOBEC3B-204ENST00000407298 NFE2L2Q16236 605 aa16.18■□□□□ 0.18
APOBEC3B-204ENST00000407298 DPP8Q6V1X1 898 aaPredicted RBP16.18■□□□□ 0.18
APOBEC3B-204ENST00000407298 COL4A5P29400 1685 aa16.18■□□□□ 0.18
APOBEC3B-204ENST00000407298 LTBP1Q14766 1721 aa16.17■□□□□ 0.18
APOBEC3B-204ENST00000407298 HSP90AB3PQ58FF7 597 aa16.17■□□□□ 0.18
APOBEC3B-204ENST00000407298 CIAPIN1Q6FI81 312 aa16.17■□□□□ 0.18
APOBEC3B-204ENST00000407298 SAPCD2Q86UD0 394 aa16.17■□□□□ 0.18
APOBEC3B-204ENST00000407298 SP8Q8IXZ3 490 aa16.17■□□□□ 0.18
APOBEC3B-204ENST00000407298 MPNDQ8N594 471 aa16.17■□□□□ 0.18
APOBEC3B-204ENST00000407298 BCL2L13Q9BXK5 485 aa16.17■□□□□ 0.18
APOBEC3B-204ENST00000407298 PGAP2Q9UHJ9 254 aa16.17■□□□□ 0.18
APOBEC3B-204ENST00000407298 MAPK8IP3Q9UPT6 1336 aa16.17■□□□□ 0.18
APOBEC3B-204ENST00000407298 THSD7BQ9C0I4 1608 aa16.16■□□□□ 0.18
APOBEC3B-204ENST00000407298 AOC2O75106 756 aa16.16■□□□□ 0.18
APOBEC3B-204ENST00000407298 RGS19P49795 217 aa16.16■□□□□ 0.18
APOBEC3B-204ENST00000407298 GMPSP49915 693 aaPredicted RBP16.16■□□□□ 0.18
APOBEC3B-204ENST00000407298 BRPF1P55201 1214 aaPredicted RBP16.16■□□□□ 0.18
APOBEC3B-204ENST00000407298 CDC37L1Q7L3B6 337 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms