RNA–Protein interactions for RNA: ENST00000406961.5

NCOA1-205, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene NCOA1, Length 7,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-205ENST00000406961 NLRP5P59047 1200 aa18.62■□□□□ 0.57
NCOA1-205ENST00000406961 CCDC144CPQ8IYA2 1237 aa18.62■□□□□ 0.57
NCOA1-205ENST00000406961 IARSP41252 1262 aaKnown RBP18.62■□□□□ 0.57
NCOA1-205ENST00000406961 ESPNB1AK53 854 aa18.62■□□□□ 0.57
NCOA1-205ENST00000406961 TMX3Q96JJ7 454 aa18.62■□□□□ 0.57
NCOA1-205ENST00000406961 RNMTO43148 476 aaKnown RBP18.62■□□□□ 0.57
NCOA1-205ENST00000406961 IL15P40933 162 aaPredicted RBP18.62■□□□□ 0.57
NCOA1-205ENST00000406961 ATP2B3Q16720 1220 aa18.62■□□□□ 0.57
NCOA1-205ENST00000406961 MAP7D2Q96T17 732 aa18.61■□□□□ 0.57
NCOA1-205ENST00000406961 NPC1L1Q9UHC9 1359 aa18.61■□□□□ 0.57
NCOA1-205ENST00000406961 RAB11FIP4Q86YS3 637 aa18.61■□□□□ 0.57
NCOA1-205ENST00000406961 DCTPP1Q9H773 170 aa18.61■□□□□ 0.57
NCOA1-205ENST00000406961 DCAF5Q96JK2 942 aa18.61■□□□□ 0.57
NCOA1-205ENST00000406961 ZBTB40Q9NUA8 1239 aa18.61■□□□□ 0.57
NCOA1-205ENST00000406961 EIF5P55010 431 aaKnown RBP18.61■□□□□ 0.57
NCOA1-205ENST00000406961 CWF19L2Q2TBE0 894 aaKnown RBP18.61■□□□□ 0.57
NCOA1-205ENST00000406961 SPTY2D1Q68D10 685 aaPredicted RBP18.61■□□□□ 0.57
NCOA1-205ENST00000406961 TFIP11Q9UBB9 837 aaKnown RBP18.61■□□□□ 0.57
NCOA1-205ENST00000406961 EDC4Q6P2E9 1401 aaKnown RBP18.6■□□□□ 0.57
NCOA1-205ENST00000406961 CCDC194A0A1B0GVG4 234 aa18.6■□□□□ 0.57
NCOA1-205ENST00000406961 METAP2P50579 478 aaKnown RBP eCLIP18.6■□□□□ 0.57
NCOA1-205ENST00000406961 BAG4O95429 457 aaKnown RBP18.6■□□□□ 0.57
NCOA1-205ENST00000406961 IL13P35225 146 aa18.6■□□□□ 0.57
NCOA1-205ENST00000406961 C8orf34Q49A92 452 aa18.6■□□□□ 0.57
NCOA1-205ENST00000406961 DDB1Q16531 1140 aa18.6■□□□□ 0.57
NCOA1-205ENST00000406961 CKAP2LQ8IYA6 745 aa18.6■□□□□ 0.57
NCOA1-205ENST00000406961 ORC3Q9UBD5 711 aaPredicted RBP18.6■□□□□ 0.57
NCOA1-205ENST00000406961 ZFYP08048 801 aaPredicted RBP18.6■□□□□ 0.57
NCOA1-205ENST00000406961 MICU3Q86XE3 530 aa18.6■□□□□ 0.57
NCOA1-205ENST00000406961 FSIP1Q8NA03 581 aa18.6■□□□□ 0.57
NCOA1-205ENST00000406961 CTAGE5O15320 804 aa18.6■□□□□ 0.57
NCOA1-205ENST00000406961 BAG3O95817 575 aa18.59■□□□□ 0.57
NCOA1-205ENST00000406961 RDXP35241 583 aaKnown RBP18.59■□□□□ 0.57
NCOA1-205ENST00000406961 PDE4BQ07343 736 aa18.59■□□□□ 0.57
NCOA1-205ENST00000406961 ANKRD18AQ8IVF6 992 aa18.59■□□□□ 0.57
NCOA1-205ENST00000406961 DDX19AQ9NUU7 478 aaKnown RBP18.59■□□□□ 0.57
NCOA1-205ENST00000406961 BRF1Q92994 677 aa18.59■□□□□ 0.57
NCOA1-205ENST00000406961 RBM8AQ9Y5S9 174 aaKnown RBP18.59■□□□□ 0.57
NCOA1-205ENST00000406961 HSPA2P54652 639 aa18.59■□□□□ 0.57
NCOA1-205ENST00000406961 CCDC181Q5TID7 509 aa18.59■□□□□ 0.57
NCOA1-205ENST00000406961 PPFIA3O75145 1194 aa18.59■□□□□ 0.57
NCOA1-205ENST00000406961 ST5P78524 1137 aa18.58■□□□□ 0.57
NCOA1-205ENST00000406961 TOM1O60784 492 aa18.58■□□□□ 0.57
NCOA1-205ENST00000406961 MCM5P33992 734 aa18.58■□□□□ 0.57
NCOA1-205ENST00000406961 SMARCC1Q92922 1105 aaPredicted RBP18.58■□□□□ 0.57
NCOA1-205ENST00000406961 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.58■□□□□ 0.573e-6■■■■■ 89.2
NCOA1-205ENST00000406961 TSPY2A6NKD2 308 aa18.58■□□□□ 0.57
NCOA1-205ENST00000406961 MCMDC2Q4G0Z9 681 aa18.58■□□□□ 0.56
NCOA1-205ENST00000406961 KLHL10Q6JEL2 608 aa18.58■□□□□ 0.56
NCOA1-205ENST00000406961 SBNO1A3KN83 1393 aa18.58■□□□□ 0.56
NCOA1-205ENST00000406961 RBM10P98175 930 aaKnown RBP18.57■□□□□ 0.56
NCOA1-205ENST00000406961 ZSCAN30Q86W11 494 aa18.57■□□□□ 0.56
NCOA1-205ENST00000406961 CNNM3Q8NE01 707 aa18.57■□□□□ 0.56
NCOA1-205ENST00000406961 SIRT1Q96EB6 747 aa18.57■□□□□ 0.56
NCOA1-205ENST00000406961 TTC41PQ6P2S7 1318 aa18.57■□□□□ 0.56
NCOA1-205ENST00000406961 MAGI3Q5TCQ9 1506 aa18.57■□□□□ 0.56
NCOA1-205ENST00000406961 PATL2C9JE40 543 aaKnown RBP18.57■□□□□ 0.56
NCOA1-205ENST00000406961 ANAPC15P60006 121 aa18.57■□□□□ 0.56
NCOA1-205ENST00000406961 NECAB1Q8N987 351 aa18.57■□□□□ 0.56
NCOA1-205ENST00000406961 KAT14Q9H8E8 782 aa18.57■□□□□ 0.56
NCOA1-205ENST00000406961 EPB41L2O43491 1005 aaKnown RBP18.57■□□□□ 0.56
NCOA1-205ENST00000406961 NMIQ13287 307 aaPredicted RBP18.57■□□□□ 0.56
NCOA1-205ENST00000406961 UTP14AQ9BVJ6 771 aaKnown RBP18.57■□□□□ 0.56
NCOA1-205ENST00000406961 KIF5BP33176 963 aa18.57■□□□□ 0.56
NCOA1-205ENST00000406961 CRNKL1Q9BZJ0 848 aaKnown RBP18.57■□□□□ 0.56
NCOA1-205ENST00000406961 NIP7Q9Y221 180 aaKnown RBP eCLIP18.57■□□□□ 0.56
NCOA1-205ENST00000406961 DZIP3Q86Y13 1208 aaKnown RBP18.57■□□□□ 0.56
NCOA1-205ENST00000406961 SETDB2Q96T68 719 aa18.57■□□□□ 0.56
NCOA1-205ENST00000406961 SEPT11Q9NVA2 429 aaKnown RBP18.57■□□□□ 0.56
NCOA1-205ENST00000406961 PCDH11XQ9BZA7 1347 aa18.56■□□□□ 0.56
NCOA1-205ENST00000406961 PCDH11YQ9BZA8 1340 aa18.56■□□□□ 0.56
NCOA1-205ENST00000406961 TNIP1Q15025 636 aa18.56■□□□□ 0.56
NCOA1-205ENST00000406961 SLC4A8Q2Y0W8 1093 aa18.56■□□□□ 0.56
NCOA1-205ENST00000406961 SLC26A6Q9BXS9 759 aa18.56■□□□□ 0.56
NCOA1-205ENST00000406961 SOS1Q07889 1333 aaPredicted RBP18.56■□□□□ 0.56
NCOA1-205ENST00000406961 TMEM266Q2M3C6 531 aa18.56■□□□□ 0.56
NCOA1-205ENST00000406961 KLF18A0A0U1RQI7 1052 aa18.56■□□□□ 0.56
NCOA1-205ENST00000406961 UBAP1LF5GYI3 381 aa18.56■□□□□ 0.56
NCOA1-205ENST00000406961 GSTO1P78417 241 aa18.55■□□□□ 0.56
NCOA1-205ENST00000406961 RAB34Q9BZG1 259 aa18.55■□□□□ 0.56
NCOA1-205ENST00000406961 CYP7A1P22680 504 aa18.55■□□□□ 0.56
NCOA1-205ENST00000406961 SFPQP23246 707 aaKnown RBP eCLIP18.55■□□□□ 0.56
NCOA1-205ENST00000406961 CUL5Q93034 780 aa18.55■□□□□ 0.56
NCOA1-205ENST00000406961 ZSCAN22P10073 491 aaPredicted RBP18.55■□□□□ 0.56
NCOA1-205ENST00000406961 SKIDA1Q1XH10 827 aa18.55■□□□□ 0.56
NCOA1-205ENST00000406961 TCEANC2Q96MN5 208 aa18.55■□□□□ 0.56
NCOA1-205ENST00000406961 LRRC2Q9BYS8 371 aa18.55■□□□□ 0.56
NCOA1-205ENST00000406961 SLC4A4Q9Y6R1 1079 aa18.55■□□□□ 0.56
NCOA1-205ENST00000406961 SMC5Q8IY18 1101 aa18.55■□□□□ 0.56
NCOA1-205ENST00000406961 PAG1Q9NWQ8 432 aa18.55■□□□□ 0.56
NCOA1-205ENST00000406961 IQSEC3Q9UPP2 1182 aaPredicted RBP18.55■□□□□ 0.56
NCOA1-205ENST00000406961 C8orf37Q96NL8 207 aa18.54■□□□□ 0.56
NCOA1-205ENST00000406961 ZNF622Q969S3 477 aaKnown RBP eCLIP18.54■□□□□ 0.569e-7■■■□□ 16.8
NCOA1-205ENST00000406961 KRT23Q9C075 422 aa18.54■□□□□ 0.56
NCOA1-205ENST00000406961 UQCRHLA0A096LP55 91 aa18.54■□□□□ 0.56
NCOA1-205ENST00000406961 UQCRHP07919 91 aa18.54■□□□□ 0.56
NCOA1-205ENST00000406961 CCDC12Q8WUD4 166 aaPredicted RBP18.54■□□□□ 0.56
NCOA1-205ENST00000406961 MATR3P43243 847 aaKnown RBP eCLIP18.53■□□□□ 0.561e-6■■■■■ 27.1
NCOA1-205ENST00000406961 G2E3Q7L622 706 aa18.53■□□□□ 0.56
NCOA1-205ENST00000406961 CLIP2Q9UDT6 1046 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms