RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 FBXO31Q5XUX0 539 aaPredicted RBP16.33■□□□□ 0.2
DUSP28-202ENST00000405954 CEP57L1Q8IYX8 460 aa16.33■□□□□ 0.2
DUSP28-202ENST00000405954 NECAB1Q8N987 351 aa16.33■□□□□ 0.2
DUSP28-202ENST00000405954 A0A1W2PP64 1363 aa16.33■□□□□ 0.2
DUSP28-202ENST00000405954 SHPRHQ149N8 1683 aa16.33■□□□□ 0.2
DUSP28-202ENST00000405954 EVC2Q86UK5 1308 aa16.33■□□□□ 0.2
DUSP28-202ENST00000405954 CCP110O43303 1012 aa16.33■□□□□ 0.2
DUSP28-202ENST00000405954 MMS22LQ6ZRQ5 1243 aa16.33■□□□□ 0.2
DUSP28-202ENST00000405954 SIRT2Q8IXJ6 389 aa16.33■□□□□ 0.2
DUSP28-202ENST00000405954 EXOC4Q96A65 974 aa16.33■□□□□ 0.2
DUSP28-202ENST00000405954 CD109Q6YHK3 1445 aa16.33■□□□□ 0.2
DUSP28-202ENST00000405954 ERLIN2O94905 339 aa16.32■□□□□ 0.2
DUSP28-202ENST00000405954 ZNF853P0CG23 659 aa16.32■□□□□ 0.2
DUSP28-202ENST00000405954 SATB1Q01826 763 aa16.32■□□□□ 0.2
DUSP28-202ENST00000405954 OS9Q13438 667 aaPredicted RBP16.32■□□□□ 0.2
DUSP28-202ENST00000405954 DCTPP1Q9H773 170 aa16.32■□□□□ 0.2
DUSP28-202ENST00000405954 PTPRCP08575 1304 aa16.32■□□□□ 0.2
DUSP28-202ENST00000405954 BIRC2Q13490 618 aa16.32■□□□□ 0.2
DUSP28-202ENST00000405954 CUL4AQ13619 759 aa16.32■□□□□ 0.2
DUSP28-202ENST00000405954 IDI1Q13907 227 aa16.32■□□□□ 0.2
DUSP28-202ENST00000405954 KRT24Q2M2I5 525 aa16.32■□□□□ 0.2
DUSP28-202ENST00000405954 FYB1O15117 783 aa16.31■□□□□ 0.2
DUSP28-202ENST00000405954 LRRN4CLQ8ND94 238 aa16.31■□□□□ 0.2
DUSP28-202ENST00000405954 PDE11AQ9HCR9 933 aa16.31■□□□□ 0.2
DUSP28-202ENST00000405954 ORC3Q9UBD5 711 aaPredicted RBP16.31■□□□□ 0.2
DUSP28-202ENST00000405954 SF3A1Q15459 793 aaKnown RBP16.31■□□□□ 0.2
DUSP28-202ENST00000405954 AOPEPQ8N6M6 819 aa16.31■□□□□ 0.2
DUSP28-202ENST00000405954 SCAND2PQ9GZW5 306 aaPredicted RBP16.31■□□□□ 0.2
DUSP28-202ENST00000405954 SLC24A3Q9HC58 644 aa16.31■□□□□ 0.2
DUSP28-202ENST00000405954 ABCC11Q96J66 1382 aa16.31■□□□□ 0.2
DUSP28-202ENST00000405954 NPATQ14207 1427 aa16.31■□□□□ 0.2
DUSP28-202ENST00000405954 NF2P35240 595 aa16.31■□□□□ 0.2
DUSP28-202ENST00000405954 CWC27Q6UX04 472 aaKnown RBP16.31■□□□□ 0.2
DUSP28-202ENST00000405954 ELP1O95163 1332 aa16.3■□□□□ 0.2
DUSP28-202ENST00000405954 A0A087WWV3 80 aa16.3■□□□□ 0.2
DUSP28-202ENST00000405954 AK2P54819 239 aa16.3■□□□□ 0.2
DUSP28-202ENST00000405954 CCDC30Q5VVM6 783 aa16.3■□□□□ 0.2
DUSP28-202ENST00000405954 JAKMIP1Q96N16 626 aaKnown RBP16.3■□□□□ 0.2
DUSP28-202ENST00000405954 EMILIN1Q9Y6C2 1016 aa16.3■□□□□ 0.2
DUSP28-202ENST00000405954 KIAA0754O94854 1291 aa16.3■□□□□ 0.2
DUSP28-202ENST00000405954 PDE1AP54750 535 aa16.3■□□□□ 0.2
DUSP28-202ENST00000405954 KIF1BO60333 1816 aa16.3■□□□□ 0.2
DUSP28-202ENST00000405954 TET3O43151 1660 aa16.3■□□□□ 0.2
DUSP28-202ENST00000405954 ZNF518AQ6AHZ1 1483 aa16.3■□□□□ 0.2
DUSP28-202ENST00000405954 H2AFXP16104 143 aaPredicted RBP16.29■□□□□ 0.2
DUSP28-202ENST00000405954 PDCP20941 246 aa16.29■□□□□ 0.2
DUSP28-202ENST00000405954 NBPF11Q86T75 865 aa16.29■□□□□ 0.2
DUSP28-202ENST00000405954 JPH2Q9BR39 696 aaPredicted RBP16.29■□□□□ 0.2
DUSP28-202ENST00000405954 ZBTB12Q9Y330 459 aaPredicted RBP16.29■□□□□ 0.2
DUSP28-202ENST00000405954 PPRC1Q5VV67 1664 aaKnown RBP16.29■□□□□ 0.2
DUSP28-202ENST00000405954 RRS1Q15050 365 aaKnown RBP16.29■□□□□ 0.2
DUSP28-202ENST00000405954 DONSONQ9NYP3 566 aa16.29■□□□□ 0.2
DUSP28-202ENST00000405954 DIAPH1O60610 1272 aaKnown RBP16.29■□□□□ 0.2
DUSP28-202ENST00000405954 PPP2R3AQ06190 1150 aa16.29■□□□□ 0.2
DUSP28-202ENST00000405954 RPAP2Q8IXW5 612 aaPredicted RBP16.29■□□□□ 0.2
DUSP28-202ENST00000405954 SERPINC1P01008 464 aa16.28■□□□□ 0.2
DUSP28-202ENST00000405954 TTC6Q86TZ1 520 aa16.28■□□□□ 0.2
DUSP28-202ENST00000405954 SMARCC1Q92922 1105 aaPredicted RBP16.28■□□□□ 0.2
DUSP28-202ENST00000405954 QRICH2Q9H0J4 1663 aa16.28■□□□□ 0.2
DUSP28-202ENST00000405954 SRGAP3O43295 1099 aa16.28■□□□□ 0.2
DUSP28-202ENST00000405954 ZKSCAN1P17029 563 aaPredicted RBP16.28■□□□□ 0.2
DUSP28-202ENST00000405954 FAM107BQ9H098 131 aa16.28■□□□□ 0.2
DUSP28-202ENST00000405954 NCBP3Q53F19 620 aaKnown RBP16.28■□□□□ 0.2
DUSP28-202ENST00000405954 ERCC4Q92889 916 aaPredicted RBP16.28■□□□□ 0.2
DUSP28-202ENST00000405954 DDX11Q96FC9 970 aa16.28■□□□□ 0.2
DUSP28-202ENST00000405954 PLEKHF1Q96S99 279 aa16.28■□□□□ 0.2
DUSP28-202ENST00000405954 PHF23Q9BUL5 403 aaPredicted RBP16.28■□□□□ 0.2
DUSP28-202ENST00000405954 IL1RAPL2Q9NP60 686 aa16.28■□□□□ 0.2
DUSP28-202ENST00000405954 PUF60Q9UHX1 559 aaKnown RBP16.28■□□□□ 0.2
DUSP28-202ENST00000405954 IQSEC2Q5JU85 1478 aa16.27■□□□□ 0.2
DUSP28-202ENST00000405954 ANAPC15P60006 121 aa16.27■□□□□ 0.2
DUSP28-202ENST00000405954 ETF1P62495 437 aaKnown RBP16.27■□□□□ 0.2
DUSP28-202ENST00000405954 STX1AQ16623 288 aa16.27■□□□□ 0.2
DUSP28-202ENST00000405954 PPP1R13BQ96KQ4 1090 aa16.27■□□□□ 0.2
DUSP28-202ENST00000405954 FAN1Q9Y2M0 1017 aa16.27■□□□□ 0.2
DUSP28-202ENST00000405954 BIN1O00499 593 aa16.27■□□□□ 0.19
DUSP28-202ENST00000405954 ECM2O94769 699 aaPredicted RBP16.27■□□□□ 0.19
DUSP28-202ENST00000405954 CEP57Q86XR8 500 aa16.27■□□□□ 0.19
DUSP28-202ENST00000405954 ANO10Q9NW15 660 aa16.27■□□□□ 0.19
DUSP28-202ENST00000405954 MKRN1Q9UHC7 482 aaKnown RBP16.27■□□□□ 0.19
DUSP28-202ENST00000405954 TMED8Q6PL24 325 aaPredicted RBP16.27■□□□□ 0.19
DUSP28-202ENST00000405954 UTP14AQ9BVJ6 771 aaKnown RBP16.27■□□□□ 0.19
DUSP28-202ENST00000405954 SPG7Q9UQ90 795 aa16.27■□□□□ 0.19
DUSP28-202ENST00000405954 CYP46A1Q9Y6A2 500 aa16.27■□□□□ 0.19
DUSP28-202ENST00000405954 EBAG9O00559 213 aa16.26■□□□□ 0.19
DUSP28-202ENST00000405954 KIF1CO43896 1103 aaKnown RBP16.26■□□□□ 0.19
DUSP28-202ENST00000405954 GNAI1P63096 354 aa16.26■□□□□ 0.19
DUSP28-202ENST00000405954 LRRFIP1Q32MZ4 808 aaKnown RBP16.26■□□□□ 0.19
DUSP28-202ENST00000405954 FOXR1Q6PIV2 292 aa16.26■□□□□ 0.19
DUSP28-202ENST00000405954 IFNKQ9P0W0 207 aa16.26■□□□□ 0.19
DUSP28-202ENST00000405954 CDR1P51861 262 aa16.26■□□□□ 0.19
DUSP28-202ENST00000405954 CFAP100Q494V2 611 aa16.26■□□□□ 0.19
DUSP28-202ENST00000405954 CC2D1AQ6P1N0 951 aaPredicted RBP16.26■□□□□ 0.19
DUSP28-202ENST00000405954 TADA2BQ86TJ2 420 aa16.26■□□□□ 0.19
DUSP28-202ENST00000405954 PLA2G4DQ86XP0 818 aa16.26■□□□□ 0.19
DUSP28-202ENST00000405954 CCDC12Q8WUD4 166 aaPredicted RBP16.26■□□□□ 0.19
DUSP28-202ENST00000405954 NR1I2O75469 434 aa16.25■□□□□ 0.19
DUSP28-202ENST00000405954 ME1P48163 572 aa16.25■□□□□ 0.19
DUSP28-202ENST00000405954 LONRF2Q1L5Z9 754 aa16.25■□□□□ 0.19
DUSP28-202ENST00000405954 CCDC158Q5M9N0 1113 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms