RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 MAP2K1Q02750 393 aaPredicted RBP13.61□□□□□ -0.23
RPAIN-204ENST00000405578 TBC1D9BQ66K14 1250 aa13.61□□□□□ -0.23
RPAIN-204ENST00000405578 PRR5LQ6MZQ0 368 aa13.61□□□□□ -0.23
RPAIN-204ENST00000405578 BRIP1Q9BX63 1249 aa13.61□□□□□ -0.23
RPAIN-204ENST00000405578 LTBP1Q14766 1721 aa13.61□□□□□ -0.23
RPAIN-204ENST00000405578 ZNF541Q9H0D2 1346 aa13.61□□□□□ -0.23
RPAIN-204ENST00000405578 TNRC18O15417 2968 aaPredicted RBP13.6□□□□□ -0.23
RPAIN-204ENST00000405578 HOXB7P09629 217 aa13.6□□□□□ -0.23
RPAIN-204ENST00000405578 PRPF40BQ6NWY9 871 aaKnown RBP13.6□□□□□ -0.23
RPAIN-204ENST00000405578 TSR2Q969E8 191 aaKnown RBP13.6□□□□□ -0.23
RPAIN-204ENST00000405578 ABT1Q9ULW3 272 aaKnown RBP13.6□□□□□ -0.23
RPAIN-204ENST00000405578 ZBED9Q6R2W3 1325 aa13.6□□□□□ -0.23
RPAIN-204ENST00000405578 MAP1SQ66K74 1059 aaPredicted RBP13.59□□□□□ -0.23
RPAIN-204ENST00000405578 CNKSR1Q969H4 720 aa13.59□□□□□ -0.23
RPAIN-204ENST00000405578 HACL1Q9UJ83 578 aa13.59□□□□□ -0.23
RPAIN-204ENST00000405578 FANCIQ9NVI1 1328 aa13.59□□□□□ -0.23
RPAIN-204ENST00000405578 EPHX2P34913 555 aa13.58□□□□□ -0.24
RPAIN-204ENST00000405578 SOGA3Q5TF21 947 aa13.58□□□□□ -0.24
RPAIN-204ENST00000405578 CNTROBQ8N137 903 aa13.58□□□□□ -0.24
RPAIN-204ENST00000405578 EIF5P55010 431 aaKnown RBP13.57□□□□□ -0.24
RPAIN-204ENST00000405578 SLFN5Q08AF3 891 aa13.57□□□□□ -0.24
RPAIN-204ENST00000405578 DUSP27Q5VZP5 1158 aa13.57□□□□□ -0.24
RPAIN-204ENST00000405578 STYK1Q6J9G0 422 aa13.57□□□□□ -0.24
RPAIN-204ENST00000405578 PAXIP1Q6ZW49 1069 aaPredicted RBP13.57□□□□□ -0.24
RPAIN-204ENST00000405578 RNF123Q5XPI4 1314 aa13.57□□□□□ -0.24
RPAIN-204ENST00000405578 A0A087WZG4 1122 aa13.56□□□□□ -0.24
RPAIN-204ENST00000405578 NPHP1O15259 732 aa13.56□□□□□ -0.24
RPAIN-204ENST00000405578 SRGNP10124 158 aa13.56□□□□□ -0.24
RPAIN-204ENST00000405578 EIF2S2P20042 333 aaKnown RBP13.56□□□□□ -0.24
RPAIN-204ENST00000405578 GRM1Q13255 1194 aa13.56□□□□□ -0.24
RPAIN-204ENST00000405578 CCDC93Q567U6 631 aa13.56□□□□□ -0.24
RPAIN-204ENST00000405578 HDGFL1Q5TGJ6 251 aa13.56□□□□□ -0.24
RPAIN-204ENST00000405578 CNBD1Q8NA66 436 aa13.56□□□□□ -0.24
RPAIN-204ENST00000405578 CAPNS2Q96L46 248 aa13.56□□□□□ -0.24
RPAIN-204ENST00000405578 YTHDC1Q96MU7 727 aaKnown RBP13.56□□□□□ -0.24
RPAIN-204ENST00000405578 BEGAINQ9BUH8 593 aa13.56□□□□□ -0.24
RPAIN-204ENST00000405578 TSKSQ9UJT2 592 aa13.56□□□□□ -0.24
RPAIN-204ENST00000405578 USP16Q9Y5T5 823 aa13.56□□□□□ -0.24
RPAIN-204ENST00000405578 DLG5Q8TDM6 1919 aa13.56□□□□□ -0.24
RPAIN-204ENST00000405578 SIPA1L3O60292 1781 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-204ENST00000405578 ELL2O00472 640 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-204ENST00000405578 ST5P78524 1137 aa13.55□□□□□ -0.24
RPAIN-204ENST00000405578 TWISTNBQ3B726 338 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-204ENST00000405578 PNMA8AQ86V59 439 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-204ENST00000405578 MASTLQ96GX5 879 aa13.55□□□□□ -0.24
RPAIN-204ENST00000405578 SPINK5Q9NQ38 1064 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-204ENST00000405578 ZNF277Q9NRM2 450 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-204ENST00000405578 ZNF330Q9Y3S2 320 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-204ENST00000405578 ERBB4Q15303 1308 aa13.55□□□□□ -0.24
RPAIN-204ENST00000405578 FKBP4Q02790 459 aaKnown RBP eCLIP13.54□□□□□ -0.24
RPAIN-204ENST00000405578 EXOSC9Q06265 439 aaKnown RBP13.54□□□□□ -0.24
RPAIN-204ENST00000405578 KRT24Q2M2I5 525 aa13.54□□□□□ -0.24
RPAIN-204ENST00000405578 CCDC30Q5VVM6 783 aa13.54□□□□□ -0.24
RPAIN-204ENST00000405578 CYP4F22Q6NT55 531 aa13.54□□□□□ -0.24
RPAIN-204ENST00000405578 C8orf58Q8NAV2 365 aa13.54□□□□□ -0.24
RPAIN-204ENST00000405578 CDCA7LQ96GN5 454 aa13.54□□□□□ -0.24
RPAIN-204ENST00000405578 TBC1D2BQ9UPU7 963 aa13.54□□□□□ -0.24
RPAIN-204ENST00000405578 PRAMEF22A3QJZ6 481 aa13.53□□□□□ -0.24
RPAIN-204ENST00000405578 A1BGP04217 495 aa13.53□□□□□ -0.24
RPAIN-204ENST00000405578 IL6STP40189 918 aaPredicted RBP13.53□□□□□ -0.24
RPAIN-204ENST00000405578 ECE1P42892 770 aa13.53□□□□□ -0.24
RPAIN-204ENST00000405578 FMR1Q06787 632 aaKnown RBP eCLIP13.53□□□□□ -0.24
RPAIN-204ENST00000405578 STK31Q9BXU1 1019 aa13.53□□□□□ -0.24
RPAIN-204ENST00000405578 MCOLN1Q9GZU1 580 aa13.53□□□□□ -0.24
RPAIN-204ENST00000405578 DDX21Q9NR30 783 aaKnown RBP eCLIP13.53□□□□□ -0.24
RPAIN-204ENST00000405578 DBF4Q9UBU7 674 aaPredicted RBP13.53□□□□□ -0.24
RPAIN-204ENST00000405578 CT47B1P0C2W7 299 aaPredicted RBP13.52□□□□□ -0.25
RPAIN-204ENST00000405578 OLFM4Q6UX06 510 aa13.52□□□□□ -0.25
RPAIN-204ENST00000405578 C7orf43Q8WVR3 580 aa13.52□□□□□ -0.25
RPAIN-204ENST00000405578 GPR101Q96P66 508 aaPredicted RBP13.52□□□□□ -0.25
RPAIN-204ENST00000405578 SETDB2Q96T68 719 aa13.52□□□□□ -0.25
RPAIN-204ENST00000405578 TRMT2AQ8IZ69 625 aaKnown RBP13.51□□□□□ -0.25
RPAIN-204ENST00000405578 TSPYL6Q8N831 410 aa13.51□□□□□ -0.25
RPAIN-204ENST00000405578 NECTIN2Q92692 538 aa13.51□□□□□ -0.25
RPAIN-204ENST00000405578 ZNF428Q96B54 188 aa13.51□□□□□ -0.25
RPAIN-204ENST00000405578 HYPKQ9NX55 129 aa13.51□□□□□ -0.25
RPAIN-204ENST00000405578 AOC2O75106 756 aa13.5□□□□□ -0.25
RPAIN-204ENST00000405578 CAMTA2O94983 1202 aa13.5□□□□□ -0.25
RPAIN-204ENST00000405578 MYL6BP14649 208 aa13.5□□□□□ -0.25
RPAIN-204ENST00000405578 IARSP41252 1262 aaKnown RBP13.5□□□□□ -0.25
RPAIN-204ENST00000405578 GPC2Q8N158 579 aa13.5□□□□□ -0.25
RPAIN-204ENST00000405578 KDM3BQ7LBC6 1761 aa13.5□□□□□ -0.25
RPAIN-204ENST00000405578 COL4A5P29400 1685 aa13.5□□□□□ -0.25
RPAIN-204ENST00000405578 FZD9O00144 591 aa13.49□□□□□ -0.25
RPAIN-204ENST00000405578 VAMP4O75379 141 aa13.49□□□□□ -0.25
RPAIN-204ENST00000405578 KIF6Q6ZMV9 814 aa13.49□□□□□ -0.25
RPAIN-204ENST00000405578 CHPF2Q9P2E5 772 aa13.49□□□□□ -0.25
RPAIN-204ENST00000405578 TRAF5O00463 557 aa13.48□□□□□ -0.25
RPAIN-204ENST00000405578 NPR1P16066 1061 aa13.48□□□□□ -0.25
RPAIN-204ENST00000405578 DGKZQ13574 1117 aa13.48□□□□□ -0.25
RPAIN-204ENST00000405578 GJA3Q9Y6H8 435 aa13.48□□□□□ -0.25
RPAIN-204ENST00000405578 NBPF26B4DH59 902 aa13.47□□□□□ -0.25
RPAIN-204ENST00000405578 LMOD1P29536 600 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-204ENST00000405578 PIP4K2AP48426 406 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-204ENST00000405578 CST9Q5W186 159 aa13.47□□□□□ -0.25
RPAIN-204ENST00000405578 NBPF10Q6P3W6 841 aaKnown RBP13.47□□□□□ -0.25
RPAIN-204ENST00000405578 NBPF5PQ86XG9 351 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-204ENST00000405578 DZIP3Q86Y13 1208 aaKnown RBP13.47□□□□□ -0.25
RPAIN-204ENST00000405578 RTKN2Q8IZC4 609 aa13.47□□□□□ -0.25
RPAIN-204ENST00000405578 SYNE4Q8N205 404 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms