RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 GPTP24298 496 aa16.27■□□□□ 0.2
PRAME-204ENST00000403441 EIF4A1P60842 406 aaKnown RBP16.27■□□□□ 0.2
PRAME-204ENST00000403441 DDX10Q13206 875 aaKnown RBP16.27■□□□□ 0.2
PRAME-204ENST00000403441 GRIPAP1Q4V328 841 aa16.27■□□□□ 0.2
PRAME-204ENST00000403441 ZBTB3Q9H5J0 574 aa16.27■□□□□ 0.2
PRAME-204ENST00000403441 ERBB4Q15303 1308 aa16.26■□□□□ 0.19
PRAME-204ENST00000403441 TTLL7Q6ZT98 887 aa16.26■□□□□ 0.19
PRAME-204ENST00000403441 AIDAQ96BJ3 306 aa16.26■□□□□ 0.19
PRAME-204ENST00000403441 PLEKHF1Q96S99 279 aa16.26■□□□□ 0.19
PRAME-204ENST00000403441 THUMPD2Q9BTF0 503 aaKnown RBP16.26■□□□□ 0.19
PRAME-204ENST00000403441 SNED1Q8TER0 1413 aa16.26■□□□□ 0.19
PRAME-204ENST00000403441 ADAMTSL1Q8N6G6 1762 aa16.26■□□□□ 0.19
PRAME-204ENST00000403441 UBN2Q6ZU65 1347 aa16.25■□□□□ 0.19
PRAME-204ENST00000403441 ITGBL1O95965 494 aaPredicted RBP16.25■□□□□ 0.19
PRAME-204ENST00000403441 HOXA10P31260 410 aaPredicted RBP16.25■□□□□ 0.19
PRAME-204ENST00000403441 EIF6P56537 245 aaKnown RBP16.25■□□□□ 0.19
PRAME-204ENST00000403441 RALBP1Q15311 655 aa16.25■□□□□ 0.19
PRAME-204ENST00000403441 RBM17Q96I25 401 aaKnown RBP16.25■□□□□ 0.19
PRAME-204ENST00000403441 LMOD1P29536 600 aaPredicted RBP16.24■□□□□ 0.19
PRAME-204ENST00000403441 TMX4Q9H1E5 349 aaPredicted RBP16.24■□□□□ 0.19
PRAME-204ENST00000403441 PPEF1O14829 653 aaPredicted RBP16.23■□□□□ 0.19
PRAME-204ENST00000403441 VEGFBP49765 207 aa16.23■□□□□ 0.19
PRAME-204ENST00000403441 PARP10Q53GL7 1025 aa16.23■□□□□ 0.19
PRAME-204ENST00000403441 SUSD4Q5VX71 490 aa16.23■□□□□ 0.19
PRAME-204ENST00000403441 GIGYF2Q6Y7W6 1299 aaKnown RBP16.23■□□□□ 0.19
PRAME-204ENST00000403441 PPP1R42Q7Z4L9 355 aa16.23■□□□□ 0.19
PRAME-204ENST00000403441 CNTROBQ8N137 903 aa16.23■□□□□ 0.19
PRAME-204ENST00000403441 LARGE2Q8N3Y3 721 aa16.23■□□□□ 0.19
PRAME-204ENST00000403441 CRAMP1Q96RY5 1269 aa16.23■□□□□ 0.19
PRAME-204ENST00000403441 TSPYL4Q9UJ04 414 aa16.23■□□□□ 0.19
PRAME-204ENST00000403441 GJA3Q9Y6H8 435 aa16.23■□□□□ 0.19
PRAME-204ENST00000403441 FOXN1O15353 648 aa16.22■□□□□ 0.19
PRAME-204ENST00000403441 NTSR2O95665 410 aa16.22■□□□□ 0.19
PRAME-204ENST00000403441 MAP1SQ66K74 1059 aaPredicted RBP16.22■□□□□ 0.19
PRAME-204ENST00000403441 ZNF34Q8IZ26 560 aa16.22■□□□□ 0.19
PRAME-204ENST00000403441 CTCFP49711 727 aaPredicted RBP16.21■□□□□ 0.19
PRAME-204ENST00000403441 NIM1KQ8IY84 436 aa16.21■□□□□ 0.19
PRAME-204ENST00000403441 COL4A5P29400 1685 aa16.21■□□□□ 0.18
PRAME-204ENST00000403441 TCERG1O14776 1098 aaKnown RBP16.2■□□□□ 0.18
PRAME-204ENST00000403441 NLRP3Q96P20 1036 aa16.2■□□□□ 0.18
PRAME-204ENST00000403441 PRDM10Q9NQV6 1147 aa16.2■□□□□ 0.18
PRAME-204ENST00000403441 ABT1Q9ULW3 272 aaKnown RBP16.2■□□□□ 0.18
PRAME-204ENST00000403441 RASSF10A6NK89 507 aa16.19■□□□□ 0.18
PRAME-204ENST00000403441 LMOD3Q0VAK6 560 aa16.19■□□□□ 0.18
PRAME-204ENST00000403441 DEFB115Q30KQ5 88 aa16.19■□□□□ 0.18
PRAME-204ENST00000403441 UTP14AQ9BVJ6 771 aaKnown RBP16.19■□□□□ 0.18
PRAME-204ENST00000403441 MYBBP1AQ9BQG0 1328 aaKnown RBP16.19■□□□□ 0.18
PRAME-204ENST00000403441 PPIP5K2O43314 1243 aa16.18■□□□□ 0.18
PRAME-204ENST00000403441 EIF2S2P20042 333 aaKnown RBP16.18■□□□□ 0.18
PRAME-204ENST00000403441 SCNN1DP51172 638 aa16.18■□□□□ 0.18
PRAME-204ENST00000403441 C3orf67Q6ZVT6 689 aa16.18■□□□□ 0.18
PRAME-204ENST00000403441 BABAM1Q9NWV8 329 aa16.18■□□□□ 0.18
PRAME-204ENST00000403441 LTBP1Q14766 1721 aa16.17■□□□□ 0.18
PRAME-204ENST00000403441 RIPK4P57078 832 aa16.17■□□□□ 0.18
PRAME-204ENST00000403441 SUPT20HQ8NEM7 779 aa16.17■□□□□ 0.18
PRAME-204ENST00000403441 VPS33BQ9H267 617 aa16.17■□□□□ 0.18
PRAME-204ENST00000403441 PRKRIP1Q9H875 184 aaPredicted RBP16.17■□□□□ 0.18
PRAME-204ENST00000403441 DDX21Q9NR30 783 aaKnown RBP eCLIP16.17■□□□□ 0.18
PRAME-204ENST00000403441 WBP1LQ9NX94 342 aa16.17■□□□□ 0.18
PRAME-204ENST00000403441 ATP6V0A2Q9Y487 856 aa16.17■□□□□ 0.18
PRAME-204ENST00000403441 ZNF316A6NFI3 1004 aaPredicted RBP16.16■□□□□ 0.18
PRAME-204ENST00000403441 EPS15P42566 896 aa16.16■□□□□ 0.18
PRAME-204ENST00000403441 MAP2K1Q02750 393 aaPredicted RBP16.16■□□□□ 0.18
PRAME-204ENST00000403441 PDIA6Q15084 440 aa16.16■□□□□ 0.18
PRAME-204ENST00000403441 AOC3Q16853 763 aa16.16■□□□□ 0.18
PRAME-204ENST00000403441 HSP90AB3PQ58FF7 597 aa16.16■□□□□ 0.18
PRAME-204ENST00000403441 USP50Q70EL3 339 aaPredicted RBP16.16■□□□□ 0.18
PRAME-204ENST00000403441 LRP10Q7Z4F1 713 aa16.16■□□□□ 0.18
PRAME-204ENST00000403441 ABCC4O15439 1325 aa16.16■□□□□ 0.18
PRAME-204ENST00000403441 PROSER3Q2NL68 480 aa16.15■□□□□ 0.18
PRAME-204ENST00000403441 SLC10A5Q5PT55 438 aa16.15■□□□□ 0.18
PRAME-204ENST00000403441 SLC51AQ86UW1 340 aa16.15■□□□□ 0.18
PRAME-204ENST00000403441 ANKRD36CQ5JPF3 1778 aa16.15■□□□□ 0.18
PRAME-204ENST00000403441 WDR33Q9C0J8 1336 aaKnown RBP16.15■□□□□ 0.18
PRAME-204ENST00000403441 BBOX1O75936 387 aa16.14■□□□□ 0.17
PRAME-204ENST00000403441 ANXA1P04083 346 aa16.14■□□□□ 0.17
PRAME-204ENST00000403441 LBX1P52954 281 aa16.14■□□□□ 0.17
PRAME-204ENST00000403441 DPP8Q6V1X1 898 aaPredicted RBP16.14■□□□□ 0.17
PRAME-204ENST00000403441 PAXIP1Q6ZW49 1069 aaPredicted RBP16.14■□□□□ 0.17
PRAME-204ENST00000403441 GPRC5DQ9NZD1 345 aa16.14■□□□□ 0.17
PRAME-204ENST00000403441 ZNRF3Q9ULT6 936 aa16.14■□□□□ 0.17
PRAME-204ENST00000403441 TMPOP42166 694 aaKnown RBP16.13■□□□□ 0.17
PRAME-204ENST00000403441 ECE1P42892 770 aa16.13■□□□□ 0.17
PRAME-204ENST00000403441 AIMP1Q12904 312 aaKnown RBP16.13■□□□□ 0.17
PRAME-204ENST00000403441 DDX46Q7L014 1031 aaKnown RBP16.13■□□□□ 0.17
PRAME-204ENST00000403441 NLRP10Q86W26 655 aa16.13■□□□□ 0.17
PRAME-204ENST00000403441 RTFDC1Q9BY42 306 aaPredicted RBP16.13■□□□□ 0.17
PRAME-204ENST00000403441 ADARB2Q9NS39 739 aaKnown RBP16.13■□□□□ 0.17
PRAME-204ENST00000403441 COPS6Q7L5N1 327 aa16.12■□□□□ 0.17
PRAME-204ENST00000403441 MPNDQ8N594 471 aa16.12■□□□□ 0.17
PRAME-204ENST00000403441 XAGE3Q8WTP9 111 aa16.12■□□□□ 0.17
PRAME-204ENST00000403441 NECTIN2Q92692 538 aa16.12■□□□□ 0.17
PRAME-204ENST00000403441 CAPNS2Q96L46 248 aa16.12■□□□□ 0.17
PRAME-204ENST00000403441 BEGAINQ9BUH8 593 aa16.12■□□□□ 0.17
PRAME-204ENST00000403441 TRMT112Q9UI30 125 aaKnown RBP16.12■□□□□ 0.17
PRAME-204ENST00000403441 SH3TC1Q8TE82 1336 aa16.12■□□□□ 0.17
PRAME-204ENST00000403441 CDHR2Q9BYE9 1310 aa16.12■□□□□ 0.17
PRAME-204ENST00000403441 THSD7BQ9C0I4 1608 aa16.12■□□□□ 0.17
PRAME-204ENST00000403441 LAMB2P55268 1798 aa16.11■□□□□ 0.17
PRAME-204ENST00000403441 HCLS1P14317 486 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms