RNA–Protein interactions for RNA: ENST00000399878.7

SEL1L3-202, Transcript of SEL1L family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEL1L3, Length 4,520 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3-202ENST00000399878 LIMCH1Q9UPQ0 1083 aa21.32■■□□□ 1
SEL1L3-202ENST00000399878 IRS4O14654 1257 aaPredicted RBP21.32■■□□□ 1
SEL1L3-202ENST00000399878 CCDC144CPQ8IYA2 1237 aa21.32■■□□□ 1
SEL1L3-202ENST00000399878 RBM8AQ9Y5S9 174 aaKnown RBP21.32■■□□□ 1
SEL1L3-202ENST00000399878 DIP2CQ9Y2E4 1556 aa21.32■■□□□ 1
SEL1L3-202ENST00000399878 MRE11P49959 708 aa21.32■■□□□ 1
SEL1L3-202ENST00000399878 KRT85P78386 507 aa21.32■■□□□ 1
SEL1L3-202ENST00000399878 MAP3K12Q12852 859 aa21.32■■□□□ 1
SEL1L3-202ENST00000399878 NCBP3Q53F19 620 aaKnown RBP21.32■■□□□ 1
SEL1L3-202ENST00000399878 TTLL7Q6ZT98 887 aa21.32■■□□□ 1
SEL1L3-202ENST00000399878 TMX3Q96JJ7 454 aa21.32■■□□□ 1
SEL1L3-202ENST00000399878 IL27Q8NEV9 243 aa21.31■■□□□ 1
SEL1L3-202ENST00000399878 METTL22Q9BUU2 404 aaPredicted RBP21.31■■□□□ 1
SEL1L3-202ENST00000399878 TFIP11Q9UBB9 837 aaKnown RBP21.31■■□□□ 1
SEL1L3-202ENST00000399878 JAG2Q9Y219 1238 aa21.31■■□□□ 1
SEL1L3-202ENST00000399878 C6orf229H3BNL8 230 aa21.31■■□□□ 1
SEL1L3-202ENST00000399878 NMIQ13287 307 aaPredicted RBP21.31■■□□□ 1
SEL1L3-202ENST00000399878 ZSCAN31Q96LW9 406 aaPredicted RBP21.31■■□□□ 1
SEL1L3-202ENST00000399878 KIDINS220Q9ULH0 1771 aa21.31■■□□□ 1
SEL1L3-202ENST00000399878 ABCC4O15439 1325 aa21.31■■□□□ 1
SEL1L3-202ENST00000399878 ADGRB3O60242 1522 aa21.31■■□□□ 1
SEL1L3-202ENST00000399878 RIMBP3CA6NJZ7 1639 aa21.3■■□□□ 1
SEL1L3-202ENST00000399878 RIMBP3BA6NNM3 1639 aa21.3■■□□□ 1
SEL1L3-202ENST00000399878 RIMBP3Q9UFD9 1639 aa21.3■■□□□ 1
SEL1L3-202ENST00000399878 ZNF213O14771 459 aa21.3■■□□□ 1
SEL1L3-202ENST00000399878 FAM182BQ5T319 152 aa21.3■■□□□ 1
SEL1L3-202ENST00000399878 EDC3Q96F86 508 aaKnown RBP21.3■■□□□ 1
SEL1L3-202ENST00000399878 CHMLP26374 656 aa21.3■■□□□ 1
SEL1L3-202ENST00000399878 DBNDD2Q9BQY9 259 aa21.3■■□□□ 1
SEL1L3-202ENST00000399878 CHST3Q7LGC8 479 aa21.3■■□□□ 1
SEL1L3-202ENST00000399878 ZSCAN29Q8IWY8 852 aaPredicted RBP21.29■■□□□ 1
SEL1L3-202ENST00000399878 IL15P40933 162 aaPredicted RBP21.29■■□□□ 1
SEL1L3-202ENST00000399878 GCKRQ14397 625 aa21.29■■□□□ 1
SEL1L3-202ENST00000399878 KINO60870 393 aaKnown RBP21.28■■□□□ 1
SEL1L3-202ENST00000399878 BRF1Q92994 677 aa21.28■■□□□ 1
SEL1L3-202ENST00000399878 ERBB3P21860 1342 aa21.28■■□□□ 1
SEL1L3-202ENST00000399878 RANBP6O60518 1105 aaKnown RBP21.28■■□□□ 1
SEL1L3-202ENST00000399878 ZGPATQ8N5A5 531 aaKnown RBP21.28■■□□□ 1
SEL1L3-202ENST00000399878 SPATA32Q96LK8 384 aa21.28■■□□□ 1
SEL1L3-202ENST00000399878 INO80Q9ULG1 1556 aaPredicted RBP21.27■■□□□ 1
SEL1L3-202ENST00000399878 SYCE3A1L190 88 aa21.27■■□□□ 1
SEL1L3-202ENST00000399878 ZNF853P0CG23 659 aa21.27■■□□□ 1
SEL1L3-202ENST00000399878 KCNQ4P56696 695 aa21.27■■□□□ 1
SEL1L3-202ENST00000399878 PLBD2Q8NHP8 589 aa21.27■■□□□ 1
SEL1L3-202ENST00000399878 CDC5LQ99459 802 aaKnown RBP21.27■■□□□ 1
SEL1L3-202ENST00000399878 SLC3A2P08195 630 aaKnown RBP21.27■■□□□ 1
SEL1L3-202ENST00000399878 HOXB7P09629 217 aa21.27■■□□□ 1
SEL1L3-202ENST00000399878 TRIM22Q8IYM9 498 aa21.27■■□□□ 1
SEL1L3-202ENST00000399878 ASAP1Q9ULH1 1129 aa21.27■■□□□ 1
SEL1L3-202ENST00000399878 RPGRQ92834 1020 aaKnown RBP21.27■□□□□ 0.99
SEL1L3-202ENST00000399878 SETDB2Q96T68 719 aa21.27■□□□□ 0.99
SEL1L3-202ENST00000399878 RTL1A6NKG5 1358 aa21.26■□□□□ 0.99
SEL1L3-202ENST00000399878 XBP1P17861 261 aa21.26■□□□□ 0.99
SEL1L3-202ENST00000399878 CAMK4Q16566 473 aa21.26■□□□□ 0.99
SEL1L3-202ENST00000399878 DZIP1Q86YF9 867 aaKnown RBP21.26■□□□□ 0.99
SEL1L3-202ENST00000399878 BABAM1Q9NWV8 329 aa21.26■□□□□ 0.99
SEL1L3-202ENST00000399878 SLC9C2Q5TAH2 1124 aa21.26■□□□□ 0.99
SEL1L3-202ENST00000399878 CCDC129Q6ZRS4 1044 aa21.25■□□□□ 0.99
SEL1L3-202ENST00000399878 NEK1Q96PY6 1258 aa21.25■□□□□ 0.99
SEL1L3-202ENST00000399878 CCDC152Q4G0S7 254 aa21.25■□□□□ 0.99
SEL1L3-202ENST00000399878 USP26Q9BXU7 913 aa21.25■□□□□ 0.99
SEL1L3-202ENST00000399878 GJB2P29033 226 aa21.24■□□□□ 0.99
SEL1L3-202ENST00000399878 USP5P45974 858 aa21.24■□□□□ 0.99
SEL1L3-202ENST00000399878 GNPATO15228 680 aa21.24■□□□□ 0.99
SEL1L3-202ENST00000399878 BRINP3Q76B58 766 aa21.24■□□□□ 0.99
SEL1L3-202ENST00000399878 MICU3Q86XE3 530 aa21.24■□□□□ 0.99
SEL1L3-202ENST00000399878 ZNF592Q92610 1267 aa21.23■□□□□ 0.99
SEL1L3-202ENST00000399878 FAM227BQ96M60 508 aa21.23■□□□□ 0.99
SEL1L3-202ENST00000399878 PAG1Q9NWQ8 432 aa21.23■□□□□ 0.99
SEL1L3-202ENST00000399878 GSPT1P15170 499 aaKnown RBP21.23■□□□□ 0.99
SEL1L3-202ENST00000399878 UTP14AQ9BVJ6 771 aaKnown RBP21.23■□□□□ 0.99
SEL1L3-202ENST00000399878 TULP4Q9NRJ4 1543 aa21.23■□□□□ 0.99
SEL1L3-202ENST00000399878 GOLGA8BA8MQT2 603 aa21.23■□□□□ 0.99
SEL1L3-202ENST00000399878 ANKRD18AQ8IVF6 992 aa21.23■□□□□ 0.99
SEL1L3-202ENST00000399878 NLRP3Q96P20 1036 aa21.23■□□□□ 0.99
SEL1L3-202ENST00000399878 SPC24Q8NBT2 197 aa21.22■□□□□ 0.99
SEL1L3-202ENST00000399878 TSPY26PQ9H489 355 aa21.22■□□□□ 0.99
SEL1L3-202ENST00000399878 BRMS1Q9HCU9 246 aa21.22■□□□□ 0.99
SEL1L3-202ENST00000399878 A0A1B0GUL7 405 aa21.22■□□□□ 0.99
SEL1L3-202ENST00000399878 NEURL1BA8MQ27 555 aa21.22■□□□□ 0.99
SEL1L3-202ENST00000399878 IFIT3O14879 490 aaKnown RBP21.22■□□□□ 0.99
SEL1L3-202ENST00000399878 SIRT2Q8IXJ6 389 aa21.22■□□□□ 0.99
SEL1L3-202ENST00000399878 GRPEL1Q9HAV7 217 aa21.22■□□□□ 0.99
SEL1L3-202ENST00000399878 BAG4O95429 457 aaKnown RBP21.22■□□□□ 0.99
SEL1L3-202ENST00000399878 BEND3Q5T5X7 828 aa21.22■□□□□ 0.99
SEL1L3-202ENST00000399878 ZNF396Q96N95 335 aaPredicted RBP21.21■□□□□ 0.99
SEL1L3-202ENST00000399878 TRIM5Q9C035 493 aa21.21■□□□□ 0.99
SEL1L3-202ENST00000399878 CTDP1Q9Y5B0 961 aaPredicted RBP21.21■□□□□ 0.99
SEL1L3-202ENST00000399878 SMARCC1Q92922 1105 aaPredicted RBP21.21■□□□□ 0.99
SEL1L3-202ENST00000399878 ANO8Q9HCE9 1232 aaPredicted RBP21.21■□□□□ 0.99
SEL1L3-202ENST00000399878 TNMDQ9H2S6 317 aa21.21■□□□□ 0.99
SEL1L3-202ENST00000399878 RBM27Q9P2N5 1060 aaKnown RBP21.21■□□□□ 0.99
SEL1L3-202ENST00000399878 MIGA1Q8NAN2 632 aa21.2■□□□□ 0.98
SEL1L3-202ENST00000399878 TAF5LO75529 589 aa21.2■□□□□ 0.98
SEL1L3-202ENST00000399878 MCMDC2Q4G0Z9 681 aa21.2■□□□□ 0.98
SEL1L3-202ENST00000399878 POLR3DP05423 398 aaPredicted RBP21.2■□□□□ 0.98
SEL1L3-202ENST00000399878 ITGA6P23229 1130 aa21.2■□□□□ 0.98
SEL1L3-202ENST00000399878 MKNK2Q9HBH9 465 aa21.19■□□□□ 0.98
SEL1L3-202ENST00000399878 LMTK2Q8IWU2 1503 aa21.19■□□□□ 0.98
SEL1L3-202ENST00000399878 ZNF622Q969S3 477 aaKnown RBP eCLIP21.19■□□□□ 0.981e-6■■□□□ 12.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms