RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 USP5P45974 858 aa7.65□□□□□ -1.19
TRAPPC13-202ENST00000399438 SETDB1Q15047 1291 aa7.65□□□□□ -1.19
TRAPPC13-202ENST00000399438 MUC3BQ9H195 1237 aa7.65□□□□□ -1.19
TRAPPC13-202ENST00000399438 GGNBP2Q9H3C7 697 aa7.65□□□□□ -1.19
TRAPPC13-202ENST00000399438 KDM5AP29375 1690 aaKnown RBP7.64□□□□□ -1.19
TRAPPC13-202ENST00000399438 GPRASP1Q5JY77 1395 aa7.64□□□□□ -1.19
TRAPPC13-202ENST00000399438 TNRQ92752 1358 aa7.64□□□□□ -1.19
TRAPPC13-202ENST00000399438 TMEM131LA2VDJ0 1609 aa7.64□□□□□ -1.19
TRAPPC13-202ENST00000399438 HSP90AA1P07900 732 aaKnown RBP7.64□□□□□ -1.19
TRAPPC13-202ENST00000399438 NDUFV2P19404 249 aa7.64□□□□□ -1.19
TRAPPC13-202ENST00000399438 DUSP27Q5VZP5 1158 aa7.64□□□□□ -1.19
TRAPPC13-202ENST00000399438 EFCAB3Q8N7B9 438 aa7.64□□□□□ -1.19
TRAPPC13-202ENST00000399438 EID1Q9Y6B2 187 aa7.64□□□□□ -1.19
TRAPPC13-202ENST00000399438 NDUFB9Q9Y6M9 179 aa7.64□□□□□ -1.19
TRAPPC13-202ENST00000399438 MYO3AQ8NEV4 1616 aa7.64□□□□□ -1.19
TRAPPC13-202ENST00000399438 GOLGA2Q08379 1002 aa7.64□□□□□ -1.19
TRAPPC13-202ENST00000399438 COL19A1Q14993 1142 aa7.64□□□□□ -1.19
TRAPPC13-202ENST00000399438 PPP1R15BQ5SWA1 713 aa7.64□□□□□ -1.19
TRAPPC13-202ENST00000399438 PUF60Q9UHX1 559 aaKnown RBP7.64□□□□□ -1.19
TRAPPC13-202ENST00000399438 IFT172Q9UG01 1749 aa7.64□□□□□ -1.19
TRAPPC13-202ENST00000399438 SYCP2LQ5T4T6 812 aa7.63□□□□□ -1.19
TRAPPC13-202ENST00000399438 TMEM87AQ8NBN3 555 aa7.63□□□□□ -1.19
TRAPPC13-202ENST00000399438 NLRP1Q9C000 1473 aa7.63□□□□□ -1.19
TRAPPC13-202ENST00000399438 TCERG1O14776 1098 aaKnown RBP7.63□□□□□ -1.19
TRAPPC13-202ENST00000399438 CEBPAP49715 358 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC13-202ENST00000399438 ECM1Q16610 540 aa7.63□□□□□ -1.19
TRAPPC13-202ENST00000399438 SOGA3Q5TF21 947 aa7.63□□□□□ -1.19
TRAPPC13-202ENST00000399438 OTUD6BQ8N6M0 293 aa7.63□□□□□ -1.19
TRAPPC13-202ENST00000399438 CENPJQ9HC77 1338 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC13-202ENST00000399438 MTHFSP49914 203 aa7.63□□□□□ -1.19
TRAPPC13-202ENST00000399438 EAPPQ56P03 285 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC13-202ENST00000399438 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.63□□□□□ -1.19
TRAPPC13-202ENST00000399438 ZNF710Q8N1W2 664 aa7.63□□□□□ -1.19
TRAPPC13-202ENST00000399438 ZNF142P52746 1687 aaPredicted RBP7.63□□□□□ -1.19
TRAPPC13-202ENST00000399438 PRIM1P49642 420 aaKnown RBP7.62□□□□□ -1.19
TRAPPC13-202ENST00000399438 KCTD2Q14681 263 aa7.62□□□□□ -1.19
TRAPPC13-202ENST00000399438 AXDND1Q5T1B0 1012 aaPredicted RBP7.62□□□□□ -1.19
TRAPPC13-202ENST00000399438 CEP126Q9P2H0 1117 aa7.62□□□□□ -1.19
TRAPPC13-202ENST00000399438 UBR1Q8IWV7 1749 aa7.62□□□□□ -1.19
TRAPPC13-202ENST00000399438 KDM4FA0A1W2PPD8 638 aa7.62□□□□□ -1.19
TRAPPC13-202ENST00000399438 FAM200BP0CF97 657 aa7.62□□□□□ -1.19
TRAPPC13-202ENST00000399438 U2AF1L5P0DN76 240 aaPredicted RBP7.62□□□□□ -1.19
TRAPPC13-202ENST00000399438 MAPK1P28482 360 aa7.62□□□□□ -1.19
TRAPPC13-202ENST00000399438 U2AF1Q01081 240 aaKnown RBP eCLIP7.62□□□□□ -1.191e-6■■□□□ 12.9
TRAPPC13-202ENST00000399438 IDI1Q13907 227 aa7.62□□□□□ -1.19
TRAPPC13-202ENST00000399438 VPS72Q15906 364 aa7.62□□□□□ -1.19
TRAPPC13-202ENST00000399438 RNPC3Q96LT9 517 aaKnown RBP7.62□□□□□ -1.19
TRAPPC13-202ENST00000399438 FRMD6Q96NE9 622 aa7.62□□□□□ -1.19
TRAPPC13-202ENST00000399438 CDC5LQ99459 802 aaKnown RBP7.62□□□□□ -1.19
TRAPPC13-202ENST00000399438 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.62□□□□□ -1.19
TRAPPC13-202ENST00000399438 MYO5BQ9ULV0 1848 aa7.62□□□□□ -1.19
TRAPPC13-202ENST00000399438 USP17L8P0C7I0 530 aa7.61□□□□□ -1.19
TRAPPC13-202ENST00000399438 PLEKHG4Q58EX7 1191 aa7.61□□□□□ -1.19
TRAPPC13-202ENST00000399438 CCDC174Q6PII3 467 aa7.61□□□□□ -1.19
TRAPPC13-202ENST00000399438 MCF2L2Q86YR7 1114 aa7.61□□□□□ -1.19
TRAPPC13-202ENST00000399438 STAC3Q96MF2 364 aa7.61□□□□□ -1.19
TRAPPC13-202ENST00000399438 FEZ2Q9UHY8 353 aaPredicted RBP7.61□□□□□ -1.19
TRAPPC13-202ENST00000399438 NSD3Q9BZ95 1437 aa7.61□□□□□ -1.19
TRAPPC13-202ENST00000399438 HDAC1Q13547 482 aaPredicted RBP7.61□□□□□ -1.19
TRAPPC13-202ENST00000399438 SIM2Q14190 667 aaPredicted RBP7.61□□□□□ -1.19
TRAPPC13-202ENST00000399438 DRC7Q8IY82 874 aa7.61□□□□□ -1.19
TRAPPC13-202ENST00000399438 NGDNQ8NEJ9 315 aaKnown RBP7.61□□□□□ -1.19
TRAPPC13-202ENST00000399438 RELTQ969Z4 430 aa7.61□□□□□ -1.19
TRAPPC13-202ENST00000399438 PPLO60437 1756 aa7.61□□□□□ -1.19
TRAPPC13-202ENST00000399438 A2ML1A8K2U0 1454 aa7.61□□□□□ -1.19
TRAPPC13-202ENST00000399438 SCAF11Q99590 1463 aaKnown RBP7.61□□□□□ -1.19
TRAPPC13-202ENST00000399438 ATP9BO43861 1147 aa7.61□□□□□ -1.19
TRAPPC13-202ENST00000399438 RUNDC1Q96C34 613 aa7.61□□□□□ -1.19
TRAPPC13-202ENST00000399438 FAM161BQ96MY7 647 aa7.61□□□□□ -1.19
TRAPPC13-202ENST00000399438 IPO9Q96P70 1041 aaKnown RBP7.61□□□□□ -1.19
TRAPPC13-202ENST00000399438 NEXMIFQ5QGS0 1516 aa7.61□□□□□ -1.19
TRAPPC13-202ENST00000399438 USP48Q86UV5 1035 aa7.6□□□□□ -1.19
TRAPPC13-202ENST00000399438 CLP1Q92989 425 aaKnown RBP7.6□□□□□ -1.19
TRAPPC13-202ENST00000399438 MS4A4AQ96JQ5 239 aa7.6□□□□□ -1.19
TRAPPC13-202ENST00000399438 CEP170BQ9Y4F5 1589 aaPredicted RBP7.6□□□□□ -1.19
TRAPPC13-202ENST00000399438 AP1G2O75843 785 aa7.6□□□□□ -1.19
TRAPPC13-202ENST00000399438 C1QTNF12Q5T7M4 302 aa7.6□□□□□ -1.19
TRAPPC13-202ENST00000399438 WAPLQ7Z5K2 1190 aa7.6□□□□□ -1.19
TRAPPC13-202ENST00000399438 SAMD3Q8N6K7 520 aa7.6□□□□□ -1.19
TRAPPC13-202ENST00000399438 PCDHB8Q9UN66 801 aa7.6□□□□□ -1.19
TRAPPC13-202ENST00000399438 PCDHB13Q9Y5F0 798 aa7.6□□□□□ -1.19
TRAPPC13-202ENST00000399438 POLR1AO95602 1720 aaPredicted RBP7.6□□□□□ -1.19
TRAPPC13-202ENST00000399438 MYOM2P54296 1465 aa7.6□□□□□ -1.19
TRAPPC13-202ENST00000399438 TGFB3P10600 412 aa7.59□□□□□ -1.19
TRAPPC13-202ENST00000399438 SLFNL1Q499Z3 407 aa7.59□□□□□ -1.19
TRAPPC13-202ENST00000399438 TCP11L2Q8N4U5 519 aa7.59□□□□□ -1.19
TRAPPC13-202ENST00000399438 RNF34Q969K3 372 aa7.59□□□□□ -1.19
TRAPPC13-202ENST00000399438 IFT122Q9HBG6 1241 aa7.59□□□□□ -1.19
TRAPPC13-202ENST00000399438 PRKAB1Q9Y478 270 aa7.59□□□□□ -1.19
TRAPPC13-202ENST00000399438 FOSP01100 380 aaPredicted RBP7.59□□□□□ -1.19
TRAPPC13-202ENST00000399438 IGHDP01880 384 aa7.59□□□□□ -1.19
TRAPPC13-202ENST00000399438 SLFN5Q08AF3 891 aa7.59□□□□□ -1.19
TRAPPC13-202ENST00000399438 SEMA3FQ13275 785 aa7.59□□□□□ -1.19
TRAPPC13-202ENST00000399438 SNRNP27Q8WVK2 155 aaKnown RBP7.59□□□□□ -1.19
TRAPPC13-202ENST00000399438 METTL5Q9NRN9 209 aaKnown RBP7.59□□□□□ -1.19
TRAPPC13-202ENST00000399438 POGKQ9P215 609 aa7.59□□□□□ -1.19
TRAPPC13-202ENST00000399438 P4HBP07237 508 aaKnown RBP7.59□□□□□ -1.19
TRAPPC13-202ENST00000399438 ARID5AQ03989 594 aa7.59□□□□□ -1.19
TRAPPC13-202ENST00000399438 QPCTQ16769 361 aa7.59□□□□□ -1.19
TRAPPC13-202ENST00000399438 PRAM1Q96QH2 718 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms