RNA–Protein interactions for RNA: ENST00000399367.7

ITSN1-212, Transcript of intersectin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ITSN1, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-212ENST00000399367 TSPY3P0CV98 308 aa17.28■□□□□ 0.36
ITSN1-212ENST00000399367 TSPY8P0CW00 308 aa17.28■□□□□ 0.36
ITSN1-212ENST00000399367 CKAP2LQ8IYA6 745 aa17.28■□□□□ 0.36
ITSN1-212ENST00000399367 CTNNBL1Q8WYA6 563 aaPredicted RBP17.28■□□□□ 0.36
ITSN1-212ENST00000399367 DHX29Q7Z478 1369 aaKnown RBP17.28■□□□□ 0.36
ITSN1-212ENST00000399367 NCOA1Q15788 1441 aa17.28■□□□□ 0.36
ITSN1-212ENST00000399367 FGFR1OPO95684 399 aaKnown RBP17.28■□□□□ 0.36
ITSN1-212ENST00000399367 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.28■□□□□ 0.36
ITSN1-212ENST00000399367 ORC3Q9UBD5 711 aaPredicted RBP17.28■□□□□ 0.36
ITSN1-212ENST00000399367 DHX37Q8IY37 1157 aaKnown RBP17.28■□□□□ 0.36
ITSN1-212ENST00000399367 LRRC59Q96AG4 307 aaKnown RBP17.28■□□□□ 0.36
ITSN1-212ENST00000399367 SCAF11Q99590 1463 aaKnown RBP17.28■□□□□ 0.36
ITSN1-212ENST00000399367 SYCP3Q8IZU3 236 aa17.28■□□□□ 0.36
ITSN1-212ENST00000399367 CCDC148Q8NFR7 591 aa17.28■□□□□ 0.36
ITSN1-212ENST00000399367 VTI1AQ96AJ9 217 aa17.28■□□□□ 0.36
ITSN1-212ENST00000399367 DRC1Q96MC2 740 aa17.28■□□□□ 0.36
ITSN1-212ENST00000399367 NEK1Q96PY6 1258 aa17.28■□□□□ 0.36
ITSN1-212ENST00000399367 BIN1O00499 593 aa17.27■□□□□ 0.36
ITSN1-212ENST00000399367 PRKCSHP14314 528 aaPredicted RBP17.27■□□□□ 0.36
ITSN1-212ENST00000399367 UBA7P41226 1012 aa17.27■□□□□ 0.36
ITSN1-212ENST00000399367 FSIP1Q8NA03 581 aa17.27■□□□□ 0.36
ITSN1-212ENST00000399367 SMARCC1Q92922 1105 aaPredicted RBP17.27■□□□□ 0.36
ITSN1-212ENST00000399367 PCF11O94913 1555 aaKnown RBP17.27■□□□□ 0.36
ITSN1-212ENST00000399367 ATP2B3Q16720 1220 aa17.27■□□□□ 0.35
ITSN1-212ENST00000399367 VEZTQ9HBM0 779 aa17.27■□□□□ 0.35
ITSN1-212ENST00000399367 LMBR1LQ6UX01 489 aa17.26■□□□□ 0.35
ITSN1-212ENST00000399367 SIRT1Q96EB6 747 aa17.26■□□□□ 0.35
ITSN1-212ENST00000399367 NUP88Q99567 741 aaPredicted RBP17.26■□□□□ 0.35
ITSN1-212ENST00000399367 TOP1P11387 765 aaKnown RBP17.26■□□□□ 0.35
ITSN1-212ENST00000399367 CA8P35219 290 aa17.26■□□□□ 0.35
ITSN1-212ENST00000399367 MTIF2P46199 727 aaKnown RBP17.26■□□□□ 0.35
ITSN1-212ENST00000399367 CETN1Q12798 172 aa17.26■□□□□ 0.35
ITSN1-212ENST00000399367 CCDC40Q4G0X9 1142 aa17.26■□□□□ 0.35
ITSN1-212ENST00000399367 PLCD4Q9BRC7 762 aa17.26■□□□□ 0.35
ITSN1-212ENST00000399367 GJB2P29033 226 aa17.26■□□□□ 0.35
ITSN1-212ENST00000399367 SLC4A4Q9Y6R1 1079 aa17.26■□□□□ 0.35
ITSN1-212ENST00000399367 PTPN23Q9H3S7 1636 aa17.26■□□□□ 0.35
ITSN1-212ENST00000399367 EIF3JO75822 258 aaKnown RBP17.26■□□□□ 0.35
ITSN1-212ENST00000399367 CCDC102AQ96A19 550 aa17.26■□□□□ 0.35
ITSN1-212ENST00000399367 RRP9O43818 475 aaKnown RBP17.25■□□□□ 0.35
ITSN1-212ENST00000399367 MPHOSPH6Q99547 160 aaKnown RBP17.25■□□□□ 0.35
ITSN1-212ENST00000399367 GDPD2Q9HCC8 539 aa17.25■□□□□ 0.35
ITSN1-212ENST00000399367 AMPD3Q01432 767 aa17.25■□□□□ 0.35
ITSN1-212ENST00000399367 RHPN1Q8TCX5 695 aa17.25■□□□□ 0.35
ITSN1-212ENST00000399367 PUF60Q9UHX1 559 aaKnown RBP17.25■□□□□ 0.35
ITSN1-212ENST00000399367 NSD2O96028 1365 aa17.25■□□□□ 0.35
ITSN1-212ENST00000399367 CCDC178Q5BJE1 867 aa17.25■□□□□ 0.35
ITSN1-212ENST00000399367 DZIP3Q86Y13 1208 aaKnown RBP17.25■□□□□ 0.35
ITSN1-212ENST00000399367 NSFL1CQ9UNZ2 370 aaKnown RBP17.25■□□□□ 0.35
ITSN1-212ENST00000399367 IL2RBP14784 551 aa17.24■□□□□ 0.35
ITSN1-212ENST00000399367 GSTTP1A0A1W2PQM5 241 aa17.24■□□□□ 0.35
ITSN1-212ENST00000399367 POLD1P28340 1107 aa17.24■□□□□ 0.35
ITSN1-212ENST00000399367 WTAPQ15007 396 aa17.24■□□□□ 0.35
ITSN1-212ENST00000399367 BICD1Q96G01 975 aa17.24■□□□□ 0.35
ITSN1-212ENST00000399367 UTP14AQ9BVJ6 771 aaKnown RBP17.24■□□□□ 0.35
ITSN1-212ENST00000399367 CCDC113Q9H0I3 377 aa17.24■□□□□ 0.35
ITSN1-212ENST00000399367 NFATC2IPQ8NCF5 419 aa17.24■□□□□ 0.35
ITSN1-212ENST00000399367 RTCBQ9Y3I0 505 aaKnown RBP17.24■□□□□ 0.35
ITSN1-212ENST00000399367 TTC21AQ8NDW8 1320 aa17.24■□□□□ 0.35
ITSN1-212ENST00000399367 ISM2Q6H9L7 571 aa17.24■□□□□ 0.35
ITSN1-212ENST00000399367 NAA16Q6N069 864 aaPredicted RBP17.24■□□□□ 0.35
ITSN1-212ENST00000399367 ZSCAN30Q86W11 494 aa17.24■□□□□ 0.35
ITSN1-212ENST00000399367 FERMT2Q96AC1 680 aa17.24■□□□□ 0.35
ITSN1-212ENST00000399367 ZC3H12CQ9C0D7 883 aaKnown RBP17.24■□□□□ 0.35
ITSN1-212ENST00000399367 CCDC183Q5T5S1 534 aa17.24■□□□□ 0.35
ITSN1-212ENST00000399367 KIAA0754O94854 1291 aa17.23■□□□□ 0.35
ITSN1-212ENST00000399367 CTNNA2P26232 953 aa17.23■□□□□ 0.35
ITSN1-212ENST00000399367 PARP3Q9Y6F1 533 aa17.23■□□□□ 0.35
ITSN1-212ENST00000399367 DISP3Q9P2K9 1392 aa17.23■□□□□ 0.35
ITSN1-212ENST00000399367 LRRC2Q9BYS8 371 aa17.23■□□□□ 0.35
ITSN1-212ENST00000399367 MMRN2Q9H8L6 949 aa17.23■□□□□ 0.35
ITSN1-212ENST00000399367 TPTE2Q6XPS3 522 aa17.23■□□□□ 0.35
ITSN1-212ENST00000399367 MEIS3Q99687 375 aa17.23■□□□□ 0.35
ITSN1-212ENST00000399367 ZRANB1Q9UGI0 708 aa17.23■□□□□ 0.35
ITSN1-212ENST00000399367 MCM5P33992 734 aa17.23■□□□□ 0.35
ITSN1-212ENST00000399367 TBC1D9Q6ZT07 1266 aa17.23■□□□□ 0.35
ITSN1-212ENST00000399367 ZGPATQ8N5A5 531 aaKnown RBP17.23■□□□□ 0.35
ITSN1-212ENST00000399367 RIMBP2O15034 1052 aa17.22■□□□□ 0.35
ITSN1-212ENST00000399367 UBXN4Q92575 508 aa17.22■□□□□ 0.35
ITSN1-212ENST00000399367 PRC1O43663 620 aa17.22■□□□□ 0.35
ITSN1-212ENST00000399367 SSFA2P28290 1259 aa17.22■□□□□ 0.35
ITSN1-212ENST00000399367 AKAP4Q5JQC9 854 aa17.22■□□□□ 0.35
ITSN1-212ENST00000399367 IFIT1BQ5T764 474 aaKnown RBP17.22■□□□□ 0.35
ITSN1-212ENST00000399367 KLF18A0A0U1RQI7 1052 aa17.22■□□□□ 0.35
ITSN1-212ENST00000399367 PLS1Q14651 629 aa17.22■□□□□ 0.35
ITSN1-212ENST00000399367 JDP2Q8WYK2 163 aa17.22■□□□□ 0.35
ITSN1-212ENST00000399367 NBPF14Q5TI25 921 aa17.22■□□□□ 0.35
ITSN1-212ENST00000399367 STXBP4Q6ZWJ1 553 aa17.22■□□□□ 0.35
ITSN1-212ENST00000399367 BRF1Q92994 677 aa17.22■□□□□ 0.35
ITSN1-212ENST00000399367 LAMC3Q9Y6N6 1575 aa17.22■□□□□ 0.35
ITSN1-212ENST00000399367 KIF4BQ2VIQ3 1234 aa17.22■□□□□ 0.35
ITSN1-212ENST00000399367 ZNF804AQ7Z570 1209 aa17.22■□□□□ 0.35
ITSN1-212ENST00000399367 LUZP1Q86V48 1076 aa17.22■□□□□ 0.35
ITSN1-212ENST00000399367 ANKRD36BQ8N2N9 1353 aa17.21■□□□□ 0.35
ITSN1-212ENST00000399367 KIF5CO60282 957 aa17.21■□□□□ 0.35
ITSN1-212ENST00000399367 SLC9C2Q5TAH2 1124 aa17.21■□□□□ 0.35
ITSN1-212ENST00000399367 HELBQ8NG08 1087 aaPredicted RBP17.21■□□□□ 0.35
ITSN1-212ENST00000399367 GRM8O00222 908 aa17.21■□□□□ 0.35
ITSN1-212ENST00000399367 PPIP5K1Q6PFW1 1433 aa17.21■□□□□ 0.35
ITSN1-212ENST00000399367 UHRF1BP1LA0JNW5 1464 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms