RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 NYXQ9GZU5 481 aa18.03■□□□□ 0.48
SEC13-205ENST00000397101 RIC1Q4ADV7 1423 aa18.03■□□□□ 0.48
SEC13-205ENST00000397101 HTATSF1O43719 755 aaKnown RBP18.02■□□□□ 0.48
SEC13-205ENST00000397101 LMOD1P29536 600 aaPredicted RBP18.02■□□□□ 0.48
SEC13-205ENST00000397101 USP50Q70EL3 339 aaPredicted RBP18.02■□□□□ 0.48
SEC13-205ENST00000397101 RTF1Q92541 710 aaKnown RBP18.02■□□□□ 0.48
SEC13-205ENST00000397101 ERVV-1B6SEH8 477 aa18.01■□□□□ 0.47
SEC13-205ENST00000397101 CCER2I3L3R5 266 aa18.01■□□□□ 0.47
SEC13-205ENST00000397101 GTF2E1P29083 439 aaPredicted RBP18.01■□□□□ 0.47
SEC13-205ENST00000397101 HOXA10P31260 410 aaPredicted RBP18.01■□□□□ 0.47
SEC13-205ENST00000397101 CFAP53Q96M91 514 aa18.01■□□□□ 0.47
SEC13-205ENST00000397101 MRS2Q9HD23 443 aa18.01■□□□□ 0.47
SEC13-205ENST00000397101 IBTKQ9P2D0 1353 aaPredicted RBP18.01■□□□□ 0.47
SEC13-205ENST00000397101 SCNN1DP51172 638 aa18■□□□□ 0.47
SEC13-205ENST00000397101 HLFQ16534 295 aa18■□□□□ 0.47
SEC13-205ENST00000397101 FAM161AQ3B820 660 aa18■□□□□ 0.47
SEC13-205ENST00000397101 CAPNS2Q96L46 248 aa18■□□□□ 0.47
SEC13-205ENST00000397101 BEGAINQ9BUH8 593 aa18■□□□□ 0.47
SEC13-205ENST00000397101 MAP2K2P36507 400 aa17.99■□□□□ 0.47
SEC13-205ENST00000397101 GPR101Q96P66 508 aaPredicted RBP17.99■□□□□ 0.47
SEC13-205ENST00000397101 VPS33BQ9H267 617 aa17.99■□□□□ 0.47
SEC13-205ENST00000397101 NUDCQ9Y266 331 aa17.99■□□□□ 0.47
SEC13-205ENST00000397101 GJA3Q9Y6H8 435 aa17.98■□□□□ 0.47
SEC13-205ENST00000397101 TLL2Q9Y6L7 1015 aa17.98■□□□□ 0.47
SEC13-205ENST00000397101 LTBP1Q14766 1721 aa17.98■□□□□ 0.47
SEC13-205ENST00000397101 COL4A5P29400 1685 aa17.97■□□□□ 0.47
SEC13-205ENST00000397101 ABCC12Q96J65 1359 aa17.97■□□□□ 0.47
SEC13-205ENST00000397101 FAM177BA6PVY3 158 aa17.97■□□□□ 0.47
SEC13-205ENST00000397101 CA12O43570 354 aa17.97■□□□□ 0.47
SEC13-205ENST00000397101 MLLT1Q03111 559 aaPredicted RBP17.97■□□□□ 0.47
SEC13-205ENST00000397101 CST9Q5W186 159 aa17.97■□□□□ 0.47
SEC13-205ENST00000397101 MCM10Q7L590 875 aa17.97■□□□□ 0.47
SEC13-205ENST00000397101 HHIPL1Q96JK4 782 aa17.97■□□□□ 0.47
SEC13-205ENST00000397101 CRAMP1Q96RY5 1269 aa17.97■□□□□ 0.47
SEC13-205ENST00000397101 EPS15P42566 896 aa17.96■□□□□ 0.47
SEC13-205ENST00000397101 TAF7Q15545 349 aaPredicted RBP17.96■□□□□ 0.47
SEC13-205ENST00000397101 LARGE2Q8N3Y3 721 aa17.96■□□□□ 0.47
SEC13-205ENST00000397101 RPGRQ92834 1020 aaKnown RBP17.96■□□□□ 0.47
SEC13-205ENST00000397101 MAP3K15Q6ZN16 1313 aa17.96■□□□□ 0.46
SEC13-205ENST00000397101 CYP4F22Q6NT55 531 aa17.95■□□□□ 0.46
SEC13-205ENST00000397101 ADARB2Q9NS39 739 aaKnown RBP17.95■□□□□ 0.46
SEC13-205ENST00000397101 CCDC184Q52MB2 194 aa17.94■□□□□ 0.46
SEC13-205ENST00000397101 NUTM1Q86Y26 1132 aa17.94■□□□□ 0.46
SEC13-205ENST00000397101 RBM17Q96I25 401 aaKnown RBP17.94■□□□□ 0.46
SEC13-205ENST00000397101 PCDH10Q9P2E7 1040 aa17.94■□□□□ 0.46
SEC13-205ENST00000397101 TRPM7Q96QT4 1865 aa17.93■□□□□ 0.46
SEC13-205ENST00000397101 NIM1KQ8IY84 436 aa17.93■□□□□ 0.46
SEC13-205ENST00000397101 PNISRQ8TF01 805 aaKnown RBP17.93■□□□□ 0.46
SEC13-205ENST00000397101 PGAP2Q9UHJ9 254 aa17.93■□□□□ 0.46
SEC13-205ENST00000397101 LAMB4A4D0S4 1761 aa17.93■□□□□ 0.46
SEC13-205ENST00000397101 CCDC85CA6NKD9 419 aa17.92■□□□□ 0.46
SEC13-205ENST00000397101 PPEF1O14829 653 aaPredicted RBP17.92■□□□□ 0.46
SEC13-205ENST00000397101 U2AF1L5P0DN76 240 aaPredicted RBP17.92■□□□□ 0.46
SEC13-205ENST00000397101 U2AF1Q01081 240 aaKnown RBP eCLIP17.92■□□□□ 0.46
SEC13-205ENST00000397101 FMR1Q06787 632 aaKnown RBP eCLIP17.92■□□□□ 0.46
SEC13-205ENST00000397101 DCTN1Q14203 1278 aa17.92■□□□□ 0.46
SEC13-205ENST00000397101 KIF6Q6ZMV9 814 aa17.92■□□□□ 0.46
SEC13-205ENST00000397101 PAXIP1Q6ZW49 1069 aaPredicted RBP17.92■□□□□ 0.46
SEC13-205ENST00000397101 SAPCD2Q86UD0 394 aa17.92■□□□□ 0.46
SEC13-205ENST00000397101 GPRC5DQ9NZD1 345 aa17.92■□□□□ 0.46
SEC13-205ENST00000397101 CDHR2Q9BYE9 1310 aa17.92■□□□□ 0.46
SEC13-205ENST00000397101 BRPF1P55201 1214 aaPredicted RBP17.91■□□□□ 0.46
SEC13-205ENST00000397101 WDR43Q15061 677 aaKnown RBP eCLIP17.91■□□□□ 0.46
SEC13-205ENST00000397101 ZNF34Q8IZ26 560 aa17.91■□□□□ 0.46
SEC13-205ENST00000397101 FAM9BQ8IZU0 186 aa17.91■□□□□ 0.46
SEC13-205ENST00000397101 ZC3H15Q8WU90 426 aaKnown RBP17.91■□□□□ 0.46
SEC13-205ENST00000397101 RTFDC1Q9BY42 306 aaPredicted RBP17.91■□□□□ 0.46
SEC13-205ENST00000397101 UBN2Q6ZU65 1347 aa17.91■□□□□ 0.46
SEC13-205ENST00000397101 TRAF5O00463 557 aa17.9■□□□□ 0.46
SEC13-205ENST00000397101 PPIP5K2O43314 1243 aa17.9■□□□□ 0.46
SEC13-205ENST00000397101 NTSR2O95665 410 aa17.9■□□□□ 0.46
SEC13-205ENST00000397101 SUSD4Q5VX71 490 aa17.9■□□□□ 0.46
SEC13-205ENST00000397101 SUPT20HQ8NEM7 779 aa17.9■□□□□ 0.46
SEC13-205ENST00000397101 TMX4Q9H1E5 349 aaPredicted RBP17.9■□□□□ 0.46
SEC13-205ENST00000397101 ATP6V0A2Q9Y487 856 aa17.9■□□□□ 0.46
SEC13-205ENST00000397101 ERBB4Q15303 1308 aa17.9■□□□□ 0.46
SEC13-205ENST00000397101 NUP98P52948 1817 aa17.89■□□□□ 0.45
SEC13-205ENST00000397101 PARP10Q53GL7 1025 aa17.89■□□□□ 0.45
SEC13-205ENST00000397101 TTLL7Q6ZT98 887 aa17.89■□□□□ 0.45
SEC13-205ENST00000397101 ZNRF3Q9ULT6 936 aa17.89■□□□□ 0.45
SEC13-205ENST00000397101 AOC2O75106 756 aa17.88■□□□□ 0.45
SEC13-205ENST00000397101 CELF2O95319 508 aaKnown RBP17.88■□□□□ 0.45
SEC13-205ENST00000397101 EIF4A1P60842 406 aaKnown RBP17.88■□□□□ 0.45
SEC13-205ENST00000397101 CXCL9Q07325 125 aa17.88■□□□□ 0.45
SEC13-205ENST00000397101 SLC10A5Q5PT55 438 aa17.88■□□□□ 0.45
SEC13-205ENST00000397101 GIGYF2Q6Y7W6 1299 aaKnown RBP17.88■□□□□ 0.45
SEC13-205ENST00000397101 PPP1R42Q7Z4L9 355 aa17.88■□□□□ 0.45
SEC13-205ENST00000397101 NLRP3Q96P20 1036 aa17.88■□□□□ 0.45
SEC13-205ENST00000397101 GRM1Q13255 1194 aa17.87■□□□□ 0.45
SEC13-205ENST00000397101 GPTP24298 496 aa17.86■□□□□ 0.45
SEC13-205ENST00000397101 AOC3Q16853 763 aa17.86■□□□□ 0.45
SEC13-205ENST00000397101 NGEFQ8N5V2 710 aa17.86■□□□□ 0.45
SEC13-205ENST00000397101 MCOLN1Q9GZU1 580 aa17.86■□□□□ 0.45
SEC13-205ENST00000397101 MIS18AQ9NYP9 233 aa17.86■□□□□ 0.45
SEC13-205ENST00000397101 BBOX1O75936 387 aa17.85■□□□□ 0.45
SEC13-205ENST00000397101 CDC37L1Q7L3B6 337 aa17.85■□□□□ 0.45
SEC13-205ENST00000397101 KDM3BQ7LBC6 1761 aa17.85■□□□□ 0.45
SEC13-205ENST00000397101 RRP7AQ9Y3A4 280 aaKnown RBP17.85■□□□□ 0.45
SEC13-205ENST00000397101 GMPSP49915 693 aaPredicted RBP17.84■□□□□ 0.45
SEC13-205ENST00000397101 KIAA2012Q0VF49 1180 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms