RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 CNBD1Q8NA66 436 aa20.85■□□□□ 0.93
AP1S3-202ENST00000396653 DDX60Q8IY21 1712 aaKnown RBP20.84■□□□□ 0.93
AP1S3-202ENST00000396653 NEURL1BA8MQ27 555 aa20.84■□□□□ 0.93
AP1S3-202ENST00000396653 ATF7IPQ6VMQ6 1270 aa20.84■□□□□ 0.93
AP1S3-202ENST00000396653 UTP14AQ9BVJ6 771 aaKnown RBP20.84■□□□□ 0.93
AP1S3-202ENST00000396653 CWC25Q9NXE8 425 aaPredicted RBP20.84■□□□□ 0.93
AP1S3-202ENST00000396653 DLEC1Q9Y238 1755 aa20.84■□□□□ 0.93
AP1S3-202ENST00000396653 ABCC4O15439 1325 aa20.83■□□□□ 0.93
AP1S3-202ENST00000396653 ALDH1L1O75891 902 aa20.83■□□□□ 0.93
AP1S3-202ENST00000396653 ST5P78524 1137 aa20.83■□□□□ 0.93
AP1S3-202ENST00000396653 TRIM27P14373 513 aa20.82■□□□□ 0.92
AP1S3-202ENST00000396653 FRAT1Q92837 279 aaPredicted RBP20.82■□□□□ 0.92
AP1S3-202ENST00000396653 PPP1R1BQ9UD71 204 aaPredicted RBP20.82■□□□□ 0.92
AP1S3-202ENST00000396653 CD2APQ9Y5K6 639 aa20.82■□□□□ 0.92
AP1S3-202ENST00000396653 TNRC6CQ9HCJ0 1690 aaKnown RBP20.82■□□□□ 0.92
AP1S3-202ENST00000396653 MYH3P11055 1940 aa20.82■□□□□ 0.92
AP1S3-202ENST00000396653 NPHP1O15259 732 aa20.81■□□□□ 0.92
AP1S3-202ENST00000396653 CWF19L2Q2TBE0 894 aaKnown RBP20.81■□□□□ 0.92
AP1S3-202ENST00000396653 SLC4A10Q6U841 1118 aa20.81■□□□□ 0.92
AP1S3-202ENST00000396653 SRCIN1Q9C0H9 1055 aa20.81■□□□□ 0.92
AP1S3-202ENST00000396653 SH3TC1Q8TE82 1336 aa20.8■□□□□ 0.92
AP1S3-202ENST00000396653 PCCAP05165 728 aaPredicted RBP20.8■□□□□ 0.92
AP1S3-202ENST00000396653 CCT4P50991 539 aaKnown RBP20.8■□□□□ 0.92
AP1S3-202ENST00000396653 ZBTB38Q8NAP3 1195 aaPredicted RBP20.8■□□□□ 0.92
AP1S3-202ENST00000396653 TRMT112Q9UI30 125 aaKnown RBP20.8■□□□□ 0.92
AP1S3-202ENST00000396653 COL11A2P13942 1736 aaPredicted RBP20.8■□□□□ 0.92
AP1S3-202ENST00000396653 ABCC12Q96J65 1359 aa20.8■□□□□ 0.92
AP1S3-202ENST00000396653 BRCA1P38398 1863 aaKnown RBP20.79■□□□□ 0.92
AP1S3-202ENST00000396653 FAM177BA6PVY3 158 aa20.79■□□□□ 0.92
AP1S3-202ENST00000396653 GTF2E1P29083 439 aaPredicted RBP20.79■□□□□ 0.92
AP1S3-202ENST00000396653 GCKRQ14397 625 aa20.79■□□□□ 0.92
AP1S3-202ENST00000396653 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.79■□□□□ 0.92
AP1S3-202ENST00000396653 CDHR2Q9BYE9 1310 aa20.78■□□□□ 0.92
AP1S3-202ENST00000396653 MS4A1P11836 297 aa20.78■□□□□ 0.92
AP1S3-202ENST00000396653 SLC10A5Q5PT55 438 aa20.78■□□□□ 0.92
AP1S3-202ENST00000396653 NUTM1Q86Y26 1132 aa20.78■□□□□ 0.92
AP1S3-202ENST00000396653 BRIP1Q9BX63 1249 aa20.78■□□□□ 0.92
AP1S3-202ENST00000396653 PDZRN3Q9UPQ7 1066 aa20.78■□□□□ 0.92
AP1S3-202ENST00000396653 HSP90B1P14625 803 aaKnown RBP20.77■□□□□ 0.92
AP1S3-202ENST00000396653 ERFEQ4G0M1 354 aa20.77■□□□□ 0.92
AP1S3-202ENST00000396653 INTS3Q68E01 1043 aaKnown RBP20.77■□□□□ 0.92
AP1S3-202ENST00000396653 H7C1W4 665 aa20.76■□□□□ 0.91
AP1S3-202ENST00000396653 PDE6BP35913 854 aa20.76■□□□□ 0.91
AP1S3-202ENST00000396653 TGFB2P61812 414 aa20.76■□□□□ 0.91
AP1S3-202ENST00000396653 DZIP1LQ8IYY4 767 aaKnown RBP20.76■□□□□ 0.91
AP1S3-202ENST00000396653 FHDC1Q9C0D6 1143 aaPredicted RBP20.76■□□□□ 0.91
AP1S3-202ENST00000396653 KLRG2A4D1S0 409 aaPredicted RBP20.75■□□□□ 0.91
AP1S3-202ENST00000396653 GRM8O00222 908 aa20.75■□□□□ 0.91
AP1S3-202ENST00000396653 FTSJ3Q8IY81 847 aaKnown RBP20.75■□□□□ 0.91
AP1S3-202ENST00000396653 FAM89AQ96GI7 184 aa20.75■□□□□ 0.91
AP1S3-202ENST00000396653 UTYO14607 1347 aa20.75■□□□□ 0.91
AP1S3-202ENST00000396653 TNNQ9UQP3 1299 aa20.74■□□□□ 0.91
AP1S3-202ENST00000396653 IRS4O14654 1257 aaPredicted RBP20.73■□□□□ 0.91
AP1S3-202ENST00000396653 CASP7P55210 303 aa20.73■□□□□ 0.91
AP1S3-202ENST00000396653 UBE3BQ7Z3V4 1068 aa20.73■□□□□ 0.91
AP1S3-202ENST00000396653 KLHL34Q8N239 644 aa20.73■□□□□ 0.91
AP1S3-202ENST00000396653 CCDC24Q8N4L8 307 aa20.73■□□□□ 0.91
AP1S3-202ENST00000396653 CLUAP1Q96AJ1 413 aa20.73■□□□□ 0.91
AP1S3-202ENST00000396653 SYT17Q9BSW7 474 aa20.73■□□□□ 0.91
AP1S3-202ENST00000396653 C9orf78Q9NZ63 289 aaPredicted RBP20.73■□□□□ 0.91
AP1S3-202ENST00000396653 RRP1P56182 461 aaKnown RBP20.72■□□□□ 0.91
AP1S3-202ENST00000396653 PDE3AQ14432 1141 aa20.72■□□□□ 0.91
AP1S3-202ENST00000396653 CRY2Q49AN0 593 aa20.72■□□□□ 0.91
AP1S3-202ENST00000396653 NLRP3Q96P20 1036 aa20.72■□□□□ 0.91
AP1S3-202ENST00000396653 PLA2G12BQ9BX93 195 aa20.72■□□□□ 0.91
AP1S3-202ENST00000396653 CACNA1SQ13698 1873 aa20.71■□□□□ 0.91
AP1S3-202ENST00000396653 PDE8AO60658 829 aa20.71■□□□□ 0.91
AP1S3-202ENST00000396653 SYNE4Q8N205 404 aa20.71■□□□□ 0.91
AP1S3-202ENST00000396653 TMEM57Q8N5G2 664 aa20.71■□□□□ 0.91
AP1S3-202ENST00000396653 RLBP1P12271 317 aa20.7■□□□□ 0.9
AP1S3-202ENST00000396653 HCLS1P14317 486 aaPredicted RBP20.7■□□□□ 0.9
AP1S3-202ENST00000396653 RTL5Q5HYW3 569 aaPredicted RBP20.7■□□□□ 0.9
AP1S3-202ENST00000396653 USP44Q9H0E7 712 aa20.7■□□□□ 0.9
AP1S3-202ENST00000396653 ARFGEF1Q9Y6D6 1849 aa20.69■□□□□ 0.9
AP1S3-202ENST00000396653 H0YIN7 160 aa20.69■□□□□ 0.9
AP1S3-202ENST00000396653 PLIN1O60240 522 aa20.69■□□□□ 0.9
AP1S3-202ENST00000396653 SRGNP10124 158 aa20.69■□□□□ 0.9
AP1S3-202ENST00000396653 SF3B3Q15393 1217 aaKnown RBP20.69■□□□□ 0.9
AP1S3-202ENST00000396653 C2CD5Q86YS7 1000 aa20.69■□□□□ 0.9
AP1S3-202ENST00000396653 DPEP1P16444 411 aa20.68■□□□□ 0.9
AP1S3-202ENST00000396653 STYK1Q6J9G0 422 aa20.68■□□□□ 0.9
AP1S3-202ENST00000396653 NLGN2Q8NFZ4 835 aa20.68■□□□□ 0.9
AP1S3-202ENST00000396653 JARID2Q92833 1246 aaPredicted RBP20.68■□□□□ 0.9
AP1S3-202ENST00000396653 HDAC5Q9UQL6 1122 aa20.68■□□□□ 0.9
AP1S3-202ENST00000396653 NBPF7P0C2Y1 421 aaPredicted RBP20.67■□□□□ 0.9
AP1S3-202ENST00000396653 NPR1P16066 1061 aa20.67■□□□□ 0.9
AP1S3-202ENST00000396653 CHRNA5P30532 468 aa20.67■□□□□ 0.9
AP1S3-202ENST00000396653 PANK1Q8TE04 598 aa20.67■□□□□ 0.9
AP1S3-202ENST00000396653 MASTLQ96GX5 879 aa20.67■□□□□ 0.9
AP1S3-202ENST00000396653 GNAI3P08754 354 aa20.66■□□□□ 0.9
AP1S3-202ENST00000396653 KCNA3P22001 575 aa20.66■□□□□ 0.9
AP1S3-202ENST00000396653 HOXA10P31260 410 aaPredicted RBP20.66■□□□□ 0.9
AP1S3-202ENST00000396653 CTSWP56202 376 aa20.66■□□□□ 0.9
AP1S3-202ENST00000396653 MVPQ14764 893 aaKnown RBP20.66■□□□□ 0.9
AP1S3-202ENST00000396653 C3orf67Q6ZVT6 689 aa20.66■□□□□ 0.9
AP1S3-202ENST00000396653 ITPRIPQ8IWB1 547 aa20.66■□□□□ 0.9
AP1S3-202ENST00000396653 RTL9Q8NET4 1388 aa20.66■□□□□ 0.9
AP1S3-202ENST00000396653 A0A0G2JLW4 131 aa20.65■□□□□ 0.9
AP1S3-202ENST00000396653 UBTFL1P0CB47 393 aaPredicted RBP20.65■□□□□ 0.9
AP1S3-202ENST00000396653 RPGRQ92834 1020 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms