RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 DDNO94850 711 aaPredicted RBP23.58■■□□□ 1.37
CXCL12-204ENST00000395793 ALDH1B1P30837 517 aa23.58■■□□□ 1.37
CXCL12-204ENST00000395793 COPS6Q7L5N1 327 aa23.58■■□□□ 1.37
CXCL12-204ENST00000395793 XAGE3Q8WTP9 111 aa23.58■■□□□ 1.37
CXCL12-204ENST00000395793 COL4A5P29400 1685 aa23.57■■□□□ 1.36
CXCL12-204ENST00000395793 AIMP1Q12904 312 aaKnown RBP23.57■■□□□ 1.36
CXCL12-204ENST00000395793 PARP10Q53GL7 1025 aa23.57■■□□□ 1.36
CXCL12-204ENST00000395793 DDX21Q9NR30 783 aaKnown RBP eCLIP23.57■■□□□ 1.36
CXCL12-204ENST00000395793 HOXA10P31260 410 aaPredicted RBP23.56■■□□□ 1.36
CXCL12-204ENST00000395793 CHPF2Q9P2E5 772 aa23.56■■□□□ 1.36
CXCL12-204ENST00000395793 PPP1R42Q7Z4L9 355 aa23.55■■□□□ 1.36
CXCL12-204ENST00000395793 RTKN2Q8IZC4 609 aa23.55■■□□□ 1.36
CXCL12-204ENST00000395793 RPGRQ92834 1020 aaKnown RBP23.55■■□□□ 1.36
CXCL12-204ENST00000395793 ZNF541Q9H0D2 1346 aa23.55■■□□□ 1.36
CXCL12-204ENST00000395793 SCN4AP35499 1836 aa23.54■■□□□ 1.36
CXCL12-204ENST00000395793 APAF1O14727 1248 aa23.54■■□□□ 1.36
CXCL12-204ENST00000395793 CCDC184Q52MB2 194 aa23.54■■□□□ 1.36
CXCL12-204ENST00000395793 SYNE4Q8N205 404 aa23.54■■□□□ 1.36
CXCL12-204ENST00000395793 CFAP44Q96MT7 982 aa23.54■■□□□ 1.36
CXCL12-204ENST00000395793 ZNF853P0CG23 659 aa23.53■■□□□ 1.36
CXCL12-204ENST00000395793 NLRP10Q86W26 655 aa23.53■■□□□ 1.36
CXCL12-204ENST00000395793 UTP14AQ9BVJ6 771 aaKnown RBP23.53■■□□□ 1.36
CXCL12-204ENST00000395793 MBIPQ9NS73 344 aa23.53■■□□□ 1.36
CXCL12-204ENST00000395793 DDX60Q8IY21 1712 aaKnown RBP23.53■■□□□ 1.36
CXCL12-204ENST00000395793 POTEIP0CG38 1075 aa23.52■■□□□ 1.36
CXCL12-204ENST00000395793 POTEJP0CG39 1038 aa23.52■■□□□ 1.36
CXCL12-204ENST00000395793 IARSP41252 1262 aaKnown RBP23.52■■□□□ 1.36
CXCL12-204ENST00000395793 SLC10A5Q5PT55 438 aa23.52■■□□□ 1.36
CXCL12-204ENST00000395793 HDGFL1Q5TGJ6 251 aa23.52■■□□□ 1.36
CXCL12-204ENST00000395793 CRAMP1Q96RY5 1269 aa23.52■■□□□ 1.36
CXCL12-204ENST00000395793 TAF1P21675 1872 aa23.51■■□□□ 1.35
CXCL12-204ENST00000395793 HOXB7P09629 217 aa23.51■■□□□ 1.35
CXCL12-204ENST00000395793 PSMD1Q99460 953 aa23.51■■□□□ 1.35
CXCL12-204ENST00000395793 TCIRG1Q13488 830 aa23.5■■□□□ 1.35
CXCL12-204ENST00000395793 DUSP27Q5VZP5 1158 aa23.5■■□□□ 1.35
CXCL12-204ENST00000395793 RBM17Q96I25 401 aaKnown RBP23.5■■□□□ 1.35
CXCL12-204ENST00000395793 L3MBTL3Q96JM7 780 aaPredicted RBP23.5■■□□□ 1.35
CXCL12-204ENST00000395793 PPEF1O14829 653 aaPredicted RBP23.49■■□□□ 1.35
CXCL12-204ENST00000395793 HSP90AB3PQ58FF7 597 aa23.49■■□□□ 1.35
CXCL12-204ENST00000395793 ZNF428Q96B54 188 aa23.49■■□□□ 1.35
CXCL12-204ENST00000395793 KLRG1Q96E93 195 aa23.49■■□□□ 1.35
CXCL12-204ENST00000395793 RNF123Q5XPI4 1314 aa23.49■■□□□ 1.35
CXCL12-204ENST00000395793 ADAMTSL1Q8N6G6 1762 aa23.48■■□□□ 1.35
CXCL12-204ENST00000395793 TCERG1O14776 1098 aaKnown RBP23.48■■□□□ 1.35
CXCL12-204ENST00000395793 HCLS1P14317 486 aaPredicted RBP23.48■■□□□ 1.35
CXCL12-204ENST00000395793 CC2D2BQ6DHV5 1058 aa23.48■■□□□ 1.35
CXCL12-204ENST00000395793 NLRP3Q96P20 1036 aa23.48■■□□□ 1.35
CXCL12-204ENST00000395793 FZD9O00144 591 aa23.47■■□□□ 1.35
CXCL12-204ENST00000395793 PLBD2Q8NHP8 589 aa23.47■■□□□ 1.35
CXCL12-204ENST00000395793 IFT57Q9NWB7 429 aa23.47■■□□□ 1.35
CXCL12-204ENST00000395793 ABCC4O15439 1325 aa23.47■■□□□ 1.35
CXCL12-204ENST00000395793 LTBP1Q14766 1721 aa23.47■■□□□ 1.35
CXCL12-204ENST00000395793 COL4A1P02462 1669 aa23.46■■□□□ 1.35
CXCL12-204ENST00000395793 DBF4Q9UBU7 674 aaPredicted RBP23.46■■□□□ 1.35
CXCL12-204ENST00000395793 ISCA1Q9BUE6 129 aa23.45■■□□□ 1.34
CXCL12-204ENST00000395793 TAF1DQ9H5J8 278 aaPredicted RBP23.45■■□□□ 1.34
CXCL12-204ENST00000395793 TRMT112Q9UI30 125 aaKnown RBP23.45■■□□□ 1.34
CXCL12-204ENST00000395793 CHADLQ6NUI6 762 aa23.44■■□□□ 1.34
CXCL12-204ENST00000395793 LRRC37AA6NMS7 1700 aa23.44■■□□□ 1.34
CXCL12-204ENST00000395793 SH3TC1Q8TE82 1336 aa23.43■■□□□ 1.34
CXCL12-204ENST00000395793 IQCA1LA6NCM1 817 aa23.43■■□□□ 1.34
CXCL12-204ENST00000395793 GNAI1P63096 354 aa23.43■■□□□ 1.34
CXCL12-204ENST00000395793 ANKRD13DQ6ZTN6 518 aa23.43■■□□□ 1.34
CXCL12-204ENST00000395793 JMYQ8N9B5 988 aa23.43■■□□□ 1.34
CXCL12-204ENST00000395793 ATP6V0A2Q9Y487 856 aa23.43■■□□□ 1.34
CXCL12-204ENST00000395793 ATP5J2-PTCD1G3V325 749 aa23.42■■□□□ 1.34
CXCL12-204ENST00000395793 ELL2O00472 640 aaPredicted RBP23.42■■□□□ 1.34
CXCL12-204ENST00000395793 C8orf58Q8NAV2 365 aa23.42■■□□□ 1.34
CXCL12-204ENST00000395793 HYPKQ9NX55 129 aa23.42■■□□□ 1.34
CXCL12-204ENST00000395793 DUOX1Q9NRD9 1551 aa23.41■■□□□ 1.34
CXCL12-204ENST00000395793 JDP2Q8WYK2 163 aa23.41■■□□□ 1.34
CXCL12-204ENST00000395793 PHAXQ9H814 394 aaKnown RBP23.41■■□□□ 1.34
CXCL12-204ENST00000395793 GRIPAP1Q4V328 841 aa23.4■■□□□ 1.34
CXCL12-204ENST00000395793 LARGE2Q8N3Y3 721 aa23.4■■□□□ 1.34
CXCL12-204ENST00000395793 HACL1Q9UJ83 578 aa23.4■■□□□ 1.34
CXCL12-204ENST00000395793 CALD1Q05682 793 aaKnown RBP23.39■■□□□ 1.33
CXCL12-204ENST00000395793 LDHDQ86WU2 507 aa23.39■■□□□ 1.33
CXCL12-204ENST00000395793 GPC2Q8N158 579 aa23.39■■□□□ 1.33
CXCL12-204ENST00000395793 FAM89AQ96GI7 184 aa23.39■■□□□ 1.33
CXCL12-204ENST00000395793 EPHX2P34913 555 aa23.38■■□□□ 1.33
CXCL12-204ENST00000395793 AOC3Q16853 763 aa23.38■■□□□ 1.33
CXCL12-204ENST00000395793 PASKQ96RG2 1323 aa23.37■■□□□ 1.33
CXCL12-204ENST00000395793 EIF6P56537 245 aaKnown RBP23.37■■□□□ 1.33
CXCL12-204ENST00000395793 GRAPQ13588 217 aa23.37■■□□□ 1.33
CXCL12-204ENST00000395793 EAPPQ56P03 285 aaPredicted RBP23.37■■□□□ 1.33
CXCL12-204ENST00000395793 SP8Q8IXZ3 490 aa23.37■■□□□ 1.33
CXCL12-204ENST00000395793 TSPYL6Q8N831 410 aa23.37■■□□□ 1.33
CXCL12-204ENST00000395793 GRAPLQ8TC17 118 aaPredicted RBP23.37■■□□□ 1.33
CXCL12-204ENST00000395793 RTFDC1Q9BY42 306 aaPredicted RBP23.37■■□□□ 1.33
CXCL12-204ENST00000395793 GJA3Q9Y6H8 435 aa23.37■■□□□ 1.33
CXCL12-204ENST00000395793 PPIP5K2O43314 1243 aa23.36■■□□□ 1.33
CXCL12-204ENST00000395793 BBOX1O75936 387 aa23.36■■□□□ 1.33
CXCL12-204ENST00000395793 ZEB1P37275 1124 aaPredicted RBP23.36■■□□□ 1.33
CXCL12-204ENST00000395793 DDX46Q7L014 1031 aaKnown RBP23.36■■□□□ 1.33
CXCL12-204ENST00000395793 TRIM28Q13263 835 aaKnown RBP23.35■■□□□ 1.33
CXCL12-204ENST00000395793 RTL5Q5HYW3 569 aaPredicted RBP23.35■■□□□ 1.33
CXCL12-204ENST00000395793 NIM1KQ8IY84 436 aa23.35■■□□□ 1.33
CXCL12-204ENST00000395793 TSR2Q969E8 191 aaKnown RBP23.35■■□□□ 1.33
CXCL12-204ENST00000395793 ITGBL1O95965 494 aaPredicted RBP23.34■■□□□ 1.33
CXCL12-204ENST00000395793 SCNN1DP51172 638 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms