RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 CSRNP1Q96S65 589 aa9.06□□□□□ -0.96
CDKN3-203ENST00000395577 USP20Q9Y2K6 914 aa9.06□□□□□ -0.96
CDKN3-203ENST00000395577 A0A1W2PNR3 127 aa9.05□□□□□ -0.96
CDKN3-203ENST00000395577 INPP5BP32019 993 aa9.05□□□□□ -0.96
CDKN3-203ENST00000395577 ALG1LQ6GMV1 187 aa9.05□□□□□ -0.96
CDKN3-203ENST00000395577 TRIM46Q7Z4K8 759 aa9.05□□□□□ -0.96
CDKN3-203ENST00000395577 FAM161BQ96MY7 647 aa9.05□□□□□ -0.96
CDKN3-203ENST00000395577 MRS2Q9HD23 443 aa9.05□□□□□ -0.96
CDKN3-203ENST00000395577 RNF19AQ9NV58 838 aa9.05□□□□□ -0.96
CDKN3-203ENST00000395577 RTCBQ9Y3I0 505 aaKnown RBP9.05□□□□□ -0.96
CDKN3-203ENST00000395577 GJA3Q9Y6H8 435 aa9.05□□□□□ -0.96
CDKN3-203ENST00000395577 EIF1AYO14602 144 aaKnown RBP9.04□□□□□ -0.96
CDKN3-203ENST00000395577 ITGAEP38570 1179 aa9.04□□□□□ -0.96
CDKN3-203ENST00000395577 DAB2P98082 770 aa9.04□□□□□ -0.96
CDKN3-203ENST00000395577 PSMD2Q13200 908 aa9.04□□□□□ -0.96
CDKN3-203ENST00000395577 TMC4Q7Z404 712 aa9.04□□□□□ -0.96
CDKN3-203ENST00000395577 CMTR1Q8N1G2 835 aaKnown RBP9.04□□□□□ -0.96
CDKN3-203ENST00000395577 BACH2Q9BYV9 841 aa9.04□□□□□ -0.96
CDKN3-203ENST00000395577 GPAMQ9HCL2 828 aa9.04□□□□□ -0.96
CDKN3-203ENST00000395577 FNDC3AQ9Y2H6 1198 aaKnown RBP9.04□□□□□ -0.96
CDKN3-203ENST00000395577 CTC1Q2NKJ3 1217 aa9.03□□□□□ -0.96
CDKN3-203ENST00000395577 ZFP42Q96MM3 310 aa9.03□□□□□ -0.96
CDKN3-203ENST00000395577 DNAJC25Q9H1X3 360 aa9.03□□□□□ -0.96
CDKN3-203ENST00000395577 SORBS3O60504 671 aa9.02□□□□□ -0.97
CDKN3-203ENST00000395577 SMCPP49901 116 aaPredicted RBP9.02□□□□□ -0.97
CDKN3-203ENST00000395577 FBF1Q8TES7 1133 aa9.02□□□□□ -0.97
CDKN3-203ENST00000395577 CEP63Q96MT8 703 aa9.02□□□□□ -0.97
CDKN3-203ENST00000395577 RUBCNLQ9H714 662 aa9.02□□□□□ -0.97
CDKN3-203ENST00000395577 UBAP1LF5GYI3 381 aa9.01□□□□□ -0.97
CDKN3-203ENST00000395577 AXIN1O15169 862 aa9.01□□□□□ -0.97
CDKN3-203ENST00000395577 CPNE3O75131 537 aaKnown RBP9.01□□□□□ -0.97
CDKN3-203ENST00000395577 DGAT1O75907 488 aa9.01□□□□□ -0.97
CDKN3-203ENST00000395577 EPB42P16452 691 aa9.01□□□□□ -0.97
CDKN3-203ENST00000395577 TYRO3Q06418 890 aa9.01□□□□□ -0.97
CDKN3-203ENST00000395577 PKDCCQ504Y2 493 aa9.01□□□□□ -0.97
CDKN3-203ENST00000395577 XKR5Q6UX68 686 aa9.01□□□□□ -0.97
CDKN3-203ENST00000395577 ZNF438Q7Z4V0 828 aa9.01□□□□□ -0.97
CDKN3-203ENST00000395577 PGBD3Q8N328 593 aa9.01□□□□□ -0.97
CDKN3-203ENST00000395577 CFHR5Q9BXR6 569 aa9.01□□□□□ -0.97
CDKN3-203ENST00000395577 CRISPLD1Q9H336 500 aa9.01□□□□□ -0.97
CDKN3-203ENST00000395577 VTI1BQ9UEU0 232 aa9.01□□□□□ -0.97
CDKN3-203ENST00000395577 DYRK1BQ9Y463 629 aa9.01□□□□□ -0.97
CDKN3-203ENST00000395577 KCNMB2Q9Y691 235 aa9.01□□□□□ -0.97
CDKN3-203ENST00000395577 TNFRSF21O75509 655 aa9□□□□□ -0.97
CDKN3-203ENST00000395577 F11P03951 625 aa9□□□□□ -0.97
CDKN3-203ENST00000395577 GNA15P30679 374 aa9□□□□□ -0.97
CDKN3-203ENST00000395577 TRIP4Q15650 581 aaPredicted RBP9□□□□□ -0.97
CDKN3-203ENST00000395577 PDE12Q6L8Q7 609 aaKnown RBP9□□□□□ -0.97
CDKN3-203ENST00000395577 GAS2L1Q99501 681 aaPredicted RBP9□□□□□ -0.97
CDKN3-203ENST00000395577 FOXD3Q9UJU5 478 aaPredicted RBP9□□□□□ -0.97
CDKN3-203ENST00000395577 DNMT3LQ9UJW3 386 aa9□□□□□ -0.97
CDKN3-203ENST00000395577 SCAMP3O14828 347 aaKnown RBP8.99□□□□□ -0.97
CDKN3-203ENST00000395577 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.99□□□□□ -0.97
CDKN3-203ENST00000395577 TMEM87AQ8NBN3 555 aa8.99□□□□□ -0.97
CDKN3-203ENST00000395577 ELP3Q9H9T3 547 aa8.99□□□□□ -0.97
CDKN3-203ENST00000395577 IGSF3O75054 1194 aa8.98□□□□□ -0.97
CDKN3-203ENST00000395577 NLRP8Q86W28 1048 aa8.98□□□□□ -0.97
CDKN3-203ENST00000395577 SNX29Q8TEQ0 813 aa8.98□□□□□ -0.97
CDKN3-203ENST00000395577 FRMD6Q96NE9 622 aa8.98□□□□□ -0.97
CDKN3-203ENST00000395577 ABCC9O60706 1549 aa8.98□□□□□ -0.97
CDKN3-203ENST00000395577 GFRA3O60609 400 aa8.97□□□□□ -0.97
CDKN3-203ENST00000395577 PHACTR2O75167 634 aa8.97□□□□□ -0.97
CDKN3-203ENST00000395577 XYLBO75191 536 aa8.97□□□□□ -0.97
CDKN3-203ENST00000395577 GRNP28799 593 aaKnown RBP8.97□□□□□ -0.97
CDKN3-203ENST00000395577 EFHC2Q5JST6 749 aa8.97□□□□□ -0.97
CDKN3-203ENST00000395577 LDLRAD1Q5T700 205 aa8.97□□□□□ -0.97
CDKN3-203ENST00000395577 USPL1Q5W0Q7 1092 aa8.97□□□□□ -0.97
CDKN3-203ENST00000395577 BRD7Q9NPI1 651 aa8.97□□□□□ -0.97
CDKN3-203ENST00000395577 TMEM63CQ9P1W3 806 aa8.97□□□□□ -0.97
CDKN3-203ENST00000395577 SPG7Q9UQ90 795 aa8.97□□□□□ -0.97
CDKN3-203ENST00000395577 MAN1A2O60476 641 aa8.96□□□□□ -0.98
CDKN3-203ENST00000395577 SAMD5Q5TGI4 173 aa8.96□□□□□ -0.98
CDKN3-203ENST00000395577 CRIPAKQ8N1N5 446 aa8.96□□□□□ -0.98
CDKN3-203ENST00000395577 ZFYVE28Q9HCC9 887 aa8.96□□□□□ -0.98
CDKN3-203ENST00000395577 AK5Q9Y6K8 562 aa8.96□□□□□ -0.98
CDKN3-203ENST00000395577 NRG2O14511 850 aaPredicted RBP8.95□□□□□ -0.98
CDKN3-203ENST00000395577 HDLBPQ00341 1268 aaKnown RBP8.95□□□□□ -0.98
CDKN3-203ENST00000395577 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.95□□□□□ -0.98
CDKN3-203ENST00000395577 CCDC74AQ96AQ1 378 aa8.95□□□□□ -0.98
CDKN3-203ENST00000395577 ZCCHC2Q9C0B9 1178 aaKnown RBP8.95□□□□□ -0.98
CDKN3-203ENST00000395577 SENP3-EIF4A1A0A087X0R7 540 aa8.94□□□□□ -0.98
CDKN3-203ENST00000395577 LBRQ14739 615 aaKnown RBP8.94□□□□□ -0.98
CDKN3-203ENST00000395577 NLRP13Q86W25 1043 aa8.94□□□□□ -0.98
CDKN3-203ENST00000395577 ATP13A2Q9NQ11 1180 aa8.94□□□□□ -0.98
CDKN3-203ENST00000395577 C11orf16Q9NQ32 467 aa8.94□□□□□ -0.98
CDKN3-203ENST00000395577 NLRP2Q9NX02 1062 aa8.94□□□□□ -0.98
CDKN3-203ENST00000395577 EGFRP00533 1210 aa8.93□□□□□ -0.98
CDKN3-203ENST00000395577 EIF4BP23588 611 aaKnown RBP8.93□□□□□ -0.98
CDKN3-203ENST00000395577 ERCC5P28715 1186 aaPredicted RBP8.93□□□□□ -0.98
CDKN3-203ENST00000395577 C9orf131Q5VYM1 1079 aa8.93□□□□□ -0.98
CDKN3-203ENST00000395577 PI16Q6UXB8 463 aa8.93□□□□□ -0.98
CDKN3-203ENST00000395577 RIPOR1Q6ZS17 1223 aa8.93□□□□□ -0.98
CDKN3-203ENST00000395577 EPS8L3Q8TE67 593 aaKnown RBP8.93□□□□□ -0.98
CDKN3-203ENST00000395577 ABI2Q9NYB9 513 aaPredicted RBP8.93□□□□□ -0.98
CDKN3-203ENST00000395577 USP35Q9P2H5 1018 aa8.93□□□□□ -0.98
CDKN3-203ENST00000395577 KCNH4Q9UQ05 1017 aa8.93□□□□□ -0.98
CDKN3-203ENST00000395577 SOBPA7XYQ1 873 aa8.92□□□□□ -0.98
CDKN3-203ENST00000395577 ATXN7O15265 892 aaPredicted RBP8.92□□□□□ -0.98
CDKN3-203ENST00000395577 POLR3DP05423 398 aaPredicted RBP8.92□□□□□ -0.98
CDKN3-203ENST00000395577 IRS1P35568 1242 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms