RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 THUMPD2Q9BTF0 503 aaKnown RBP27.97■■■□□ 2.07
TRAF4-203ENST00000394925 ZBTB3Q9H5J0 574 aa27.97■■■□□ 2.07
TRAF4-203ENST00000394925 SNED1Q8TER0 1413 aa27.97■■■□□ 2.07
TRAF4-203ENST00000394925 MAP1SQ66K74 1059 aaPredicted RBP27.96■■■□□ 2.07
TRAF4-203ENST00000394925 CNTROBQ8N137 903 aa27.96■■■□□ 2.07
TRAF4-203ENST00000394925 CC2D2BQ6DHV5 1058 aa27.95■■■□□ 2.06
TRAF4-203ENST00000394925 GJA3Q9Y6H8 435 aa27.95■■■□□ 2.06
TRAF4-203ENST00000394925 UBN2Q6ZU65 1347 aa27.94■■■□□ 2.06
TRAF4-203ENST00000394925 EIF6P56537 245 aaKnown RBP27.94■■■□□ 2.06
TRAF4-203ENST00000394925 NFE2L2Q16236 605 aa27.94■■■□□ 2.06
TRAF4-203ENST00000394925 SUSD4Q5VX71 490 aa27.94■■■□□ 2.06
TRAF4-203ENST00000394925 PLEKHF1Q96S99 279 aa27.94■■■□□ 2.06
TRAF4-203ENST00000394925 HOXA10P31260 410 aaPredicted RBP27.93■■■□□ 2.06
TRAF4-203ENST00000394925 AIDAQ96BJ3 306 aa27.93■■■□□ 2.06
TRAF4-203ENST00000394925 COL4A5P29400 1685 aa27.92■■■□□ 2.06
TRAF4-203ENST00000394925 TCERG1O14776 1098 aaKnown RBP27.92■■■□□ 2.06
TRAF4-203ENST00000394925 SLC51AQ86UW1 340 aa27.91■■■□□ 2.06
TRAF4-203ENST00000394925 RBM17Q96I25 401 aaKnown RBP27.91■■■□□ 2.06
TRAF4-203ENST00000394925 IBTKQ9P2D0 1353 aaPredicted RBP27.9■■■□□ 2.06
TRAF4-203ENST00000394925 CTCFP49711 727 aaPredicted RBP27.9■■■□□ 2.06
TRAF4-203ENST00000394925 ZNF34Q8IZ26 560 aa27.9■■■□□ 2.06
TRAF4-203ENST00000394925 LARGE2Q8N3Y3 721 aa27.9■■■□□ 2.06
TRAF4-203ENST00000394925 PRDM10Q9NQV6 1147 aa27.9■■■□□ 2.06
TRAF4-203ENST00000394925 RIC1Q4ADV7 1423 aa27.9■■■□□ 2.06
TRAF4-203ENST00000394925 LMOD1P29536 600 aaPredicted RBP27.89■■■□□ 2.06
TRAF4-203ENST00000394925 DEFB115Q30KQ5 88 aa27.89■■■□□ 2.06
TRAF4-203ENST00000394925 GIGYF2Q6Y7W6 1299 aaKnown RBP27.89■■■□□ 2.06
TRAF4-203ENST00000394925 CRAMP1Q96RY5 1269 aa27.89■■■□□ 2.06
TRAF4-203ENST00000394925 PPEF1O14829 653 aaPredicted RBP27.88■■■□□ 2.05
TRAF4-203ENST00000394925 NTSR2O95665 410 aa27.88■■■□□ 2.05
TRAF4-203ENST00000394925 GRIPAP1Q4V328 841 aa27.88■■■□□ 2.05
TRAF4-203ENST00000394925 C3orf67Q6ZVT6 689 aa27.88■■■□□ 2.05
TRAF4-203ENST00000394925 WBP1LQ9NX94 342 aa27.88■■■□□ 2.05
TRAF4-203ENST00000394925 RASSF10A6NK89 507 aa27.87■■■□□ 2.05
TRAF4-203ENST00000394925 ABT1Q9ULW3 272 aaKnown RBP27.87■■■□□ 2.05
TRAF4-203ENST00000394925 MAPK8IP3Q9UPT6 1336 aa27.87■■■□□ 2.05
TRAF4-203ENST00000394925 LTBP1Q14766 1721 aa27.87■■■□□ 2.05
TRAF4-203ENST00000394925 PPP1R42Q7Z4L9 355 aa27.86■■■□□ 2.05
TRAF4-203ENST00000394925 ERBB4Q15303 1308 aa27.86■■■□□ 2.05
TRAF4-203ENST00000394925 EPS15P42566 896 aa27.85■■■□□ 2.05
TRAF4-203ENST00000394925 SCNN1DP51172 638 aa27.85■■■□□ 2.05
TRAF4-203ENST00000394925 PNNQ9H307 717 aaKnown RBP27.85■■■□□ 2.05
TRAF4-203ENST00000394925 DDX21Q9NR30 783 aaKnown RBP eCLIP27.85■■■□□ 2.05
TRAF4-203ENST00000394925 TSPYL4Q9UJ04 414 aa27.85■■■□□ 2.05
TRAF4-203ENST00000394925 LBX1P52954 281 aa27.84■■■□□ 2.05
TRAF4-203ENST00000394925 PARP10Q53GL7 1025 aa27.84■■■□□ 2.05
TRAF4-203ENST00000394925 NIM1KQ8IY84 436 aa27.84■■■□□ 2.05
TRAF4-203ENST00000394925 NLRP3Q96P20 1036 aa27.84■■■□□ 2.05
TRAF4-203ENST00000394925 EIF2S2P20042 333 aaKnown RBP27.83■■■□□ 2.05
TRAF4-203ENST00000394925 WDR33Q9C0J8 1336 aaKnown RBP27.83■■■□□ 2.05
TRAF4-203ENST00000394925 PPIP5K2O43314 1243 aa27.82■■■□□ 2.04
TRAF4-203ENST00000394925 FMR1Q06787 632 aaKnown RBP eCLIP27.82■■■□□ 2.04
TRAF4-203ENST00000394925 TMX4Q9H1E5 349 aaPredicted RBP27.82■■■□□ 2.04
TRAF4-203ENST00000394925 PDIA6Q15084 440 aa27.81■■■□□ 2.04
TRAF4-203ENST00000394925 UTP14AQ9BVJ6 771 aaKnown RBP27.81■■■□□ 2.04
TRAF4-203ENST00000394925 ANXA1P04083 346 aa27.8■■■□□ 2.04
TRAF4-203ENST00000394925 AOC3Q16853 763 aa27.8■■■□□ 2.04
TRAF4-203ENST00000394925 LRP10Q7Z4F1 713 aa27.8■■■□□ 2.04
TRAF4-203ENST00000394925 USP50Q70EL3 339 aaPredicted RBP27.79■■■□□ 2.04
TRAF4-203ENST00000394925 ATP6V0A2Q9Y487 856 aa27.79■■■□□ 2.04
TRAF4-203ENST00000394925 MAP2K1Q02750 393 aaPredicted RBP27.78■■■□□ 2.04
TRAF4-203ENST00000394925 PROSER3Q2NL68 480 aa27.78■■■□□ 2.04
TRAF4-203ENST00000394925 SLC10A5Q5PT55 438 aa27.78■■■□□ 2.04
TRAF4-203ENST00000394925 ABCC4O15439 1325 aa27.77■■■□□ 2.04
TRAF4-203ENST00000394925 HSPA8P11142 646 aaKnown RBP27.77■■■□□ 2.04
TRAF4-203ENST00000394925 RIPK4P57078 832 aa27.77■■■□□ 2.04
TRAF4-203ENST00000394925 PAXIP1Q6ZW49 1069 aaPredicted RBP27.77■■■□□ 2.04
TRAF4-203ENST00000394925 TRAF5O00463 557 aa27.76■■■□□ 2.03
TRAF4-203ENST00000394925 TRPM7Q96QT4 1865 aa27.75■■■□□ 2.03
TRAF4-203ENST00000394925 NECTIN2Q92692 538 aa27.75■■■□□ 2.03
TRAF4-203ENST00000394925 VPS33BQ9H267 617 aa27.75■■■□□ 2.03
TRAF4-203ENST00000394925 CXCL9Q07325 125 aa27.74■■■□□ 2.03
TRAF4-203ENST00000394925 AIMP1Q12904 312 aaKnown RBP27.74■■■□□ 2.03
TRAF4-203ENST00000394925 GRM1Q13255 1194 aa27.74■■■□□ 2.03
TRAF4-203ENST00000394925 CST9Q5W186 159 aa27.74■■■□□ 2.03
TRAF4-203ENST00000394925 SUPT20HQ8NEM7 779 aa27.74■■■□□ 2.03
TRAF4-203ENST00000394925 CAPNS2Q96L46 248 aa27.74■■■□□ 2.03
TRAF4-203ENST00000394925 ADARB2Q9NS39 739 aaKnown RBP27.74■■■□□ 2.03
TRAF4-203ENST00000394925 GPRC5DQ9NZD1 345 aa27.74■■■□□ 2.03
TRAF4-203ENST00000394925 ZNRF3Q9ULT6 936 aa27.74■■■□□ 2.03
TRAF4-203ENST00000394925 HCLS1P14317 486 aaPredicted RBP27.73■■■□□ 2.03
TRAF4-203ENST00000394925 CYP4F22Q6NT55 531 aa27.73■■■□□ 2.03
TRAF4-203ENST00000394925 COPS6Q7L5N1 327 aa27.73■■■□□ 2.03
TRAF4-203ENST00000394925 BBOX1O75936 387 aa27.72■■■□□ 2.03
TRAF4-203ENST00000394925 ECE1P42892 770 aa27.72■■■□□ 2.03
TRAF4-203ENST00000394925 DPP8Q6V1X1 898 aaPredicted RBP27.72■■■□□ 2.03
TRAF4-203ENST00000394925 RTFDC1Q9BY42 306 aaPredicted RBP27.72■■■□□ 2.03
TRAF4-203ENST00000394925 BABAM1Q9NWV8 329 aa27.72■■■□□ 2.03
TRAF4-203ENST00000394925 LAMB2P55268 1798 aa27.72■■■□□ 2.03
TRAF4-203ENST00000394925 ANKRD36CQ5JPF3 1778 aa27.71■■■□□ 2.03
TRAF4-203ENST00000394925 HSP90AB3PQ58FF7 597 aa27.71■■■□□ 2.03
TRAF4-203ENST00000394925 NLRP10Q86W26 655 aa27.71■■■□□ 2.03
TRAF4-203ENST00000394925 SP8Q8IXZ3 490 aa27.71■■■□□ 2.03
TRAF4-203ENST00000394925 MPNDQ8N594 471 aa27.71■■■□□ 2.03
TRAF4-203ENST00000394925 XAGE3Q8WTP9 111 aa27.71■■■□□ 2.03
TRAF4-203ENST00000394925 TMPOP42166 694 aaKnown RBP27.7■■■□□ 2.02
TRAF4-203ENST00000394925 GMPSP49915 693 aaPredicted RBP27.7■■■□□ 2.02
TRAF4-203ENST00000394925 GPR101Q96P66 508 aaPredicted RBP27.7■■■□□ 2.02
TRAF4-203ENST00000394925 DDX46Q7L014 1031 aaKnown RBP27.69■■■□□ 2.02
TRAF4-203ENST00000394925 TRMT112Q9UI30 125 aaKnown RBP27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms