RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 RAD54L2Q9Y4B4 1467 aa14.58□□□□□ -0.08
SLC28A1-203ENST00000394573 RTL1A6NKG5 1358 aa14.58□□□□□ -0.08
SLC28A1-203ENST00000394573 NR1I2O75469 434 aa14.57□□□□□ -0.08
SLC28A1-203ENST00000394573 ATP6V1DQ9Y5K8 247 aa14.57□□□□□ -0.08
SLC28A1-203ENST00000394573 CADPSQ9ULU8 1353 aa14.57□□□□□ -0.08
SLC28A1-203ENST00000394573 BECN2A8MW95 431 aa14.57□□□□□ -0.08
SLC28A1-203ENST00000394573 LARGE1O95461 756 aa14.57□□□□□ -0.08
SLC28A1-203ENST00000394573 CDC25BP30305 580 aa14.57□□□□□ -0.08
SLC28A1-203ENST00000394573 TBC1D8BQ0IIM8 1120 aa14.57□□□□□ -0.08
SLC28A1-203ENST00000394573 ERCC4Q92889 916 aaPredicted RBP14.57□□□□□ -0.08
SLC28A1-203ENST00000394573 RGS12O14924 1447 aa14.57□□□□□ -0.08
SLC28A1-203ENST00000394573 RPS6KA5O75582 802 aa14.56□□□□□ -0.08
SLC28A1-203ENST00000394573 CCDC83Q8IWF9 413 aa14.56□□□□□ -0.08
SLC28A1-203ENST00000394573 VEZTQ9HBM0 779 aa14.56□□□□□ -0.08
SLC28A1-203ENST00000394573 TRIM35Q9UPQ4 493 aa14.56□□□□□ -0.08
SLC28A1-203ENST00000394573 PPFIA4O75335 1185 aa14.56□□□□□ -0.08
SLC28A1-203ENST00000394573 AP1G2O75843 785 aa14.56□□□□□ -0.08
SLC28A1-203ENST00000394573 GJB2P29033 226 aa14.56□□□□□ -0.08
SLC28A1-203ENST00000394573 ZC3H12AQ5D1E8 599 aaKnown RBP14.56□□□□□ -0.08
SLC28A1-203ENST00000394573 RILPL2Q969X0 211 aa14.56□□□□□ -0.08
SLC28A1-203ENST00000394573 MRFAP1L1Q96HT8 127 aa14.56□□□□□ -0.08
SLC28A1-203ENST00000394573 FAM204AQ9H8W3 233 aa14.56□□□□□ -0.08
SLC28A1-203ENST00000394573 MTMR6Q9Y217 621 aa14.56□□□□□ -0.08
SLC28A1-203ENST00000394573 PARP3Q9Y6F1 533 aa14.56□□□□□ -0.08
SLC28A1-203ENST00000394573 MYO1FO00160 1098 aa14.56□□□□□ -0.08
SLC28A1-203ENST00000394573 CCT5P48643 541 aa14.56□□□□□ -0.08
SLC28A1-203ENST00000394573 LRRFIP1Q32MZ4 808 aaKnown RBP14.56□□□□□ -0.08
SLC28A1-203ENST00000394573 NBPF11Q86T75 865 aa14.56□□□□□ -0.08
SLC28A1-203ENST00000394573 DCTPP1Q9H773 170 aa14.56□□□□□ -0.08
SLC28A1-203ENST00000394573 ABCC10Q5T3U5 1492 aa14.55□□□□□ -0.08
SLC28A1-203ENST00000394573 KIF3CO14782 793 aa14.55□□□□□ -0.08
SLC28A1-203ENST00000394573 NF2P35240 595 aa14.55□□□□□ -0.08
SLC28A1-203ENST00000394573 EIF5P55010 431 aaKnown RBP14.55□□□□□ -0.08
SLC28A1-203ENST00000394573 ARMCX5Q6P1M9 558 aa14.55□□□□□ -0.08
SLC28A1-203ENST00000394573 TMC6Q7Z403 805 aa14.55□□□□□ -0.08
SLC28A1-203ENST00000394573 GPR161Q8N6U8 529 aaKnown RBP14.55□□□□□ -0.08
SLC28A1-203ENST00000394573 ESYT1Q9BSJ8 1104 aa14.55□□□□□ -0.08
SLC28A1-203ENST00000394573 USP8P40818 1118 aa14.55□□□□□ -0.08
SLC28A1-203ENST00000394573 NEDD9Q14511 834 aa14.55□□□□□ -0.08
SLC28A1-203ENST00000394573 IQCB1Q15051 598 aa14.55□□□□□ -0.08
SLC28A1-203ENST00000394573 NBPF5PQ86XG9 351 aaPredicted RBP14.55□□□□□ -0.08
SLC28A1-203ENST00000394573 ERC1Q8IUD2 1116 aa14.55□□□□□ -0.08
SLC28A1-203ENST00000394573 BICD2Q8TD16 824 aa14.55□□□□□ -0.08
SLC28A1-203ENST00000394573 SETQ01105 290 aaPredicted RBP14.54□□□□□ -0.08
SLC28A1-203ENST00000394573 PPP2R3AQ06190 1150 aa14.54□□□□□ -0.08
SLC28A1-203ENST00000394573 PTPN21Q16825 1174 aa14.54□□□□□ -0.08
SLC28A1-203ENST00000394573 TERF2IPQ9NYB0 399 aa14.54□□□□□ -0.08
SLC28A1-203ENST00000394573 GPTP24298 496 aa14.54□□□□□ -0.08
SLC28A1-203ENST00000394573 PEX19P40855 299 aa14.54□□□□□ -0.08
SLC28A1-203ENST00000394573 TMPOP42166 694 aaKnown RBP14.54□□□□□ -0.08
SLC28A1-203ENST00000394573 GOLGA8FQ08AF8 430 aa14.54□□□□□ -0.08
SLC28A1-203ENST00000394573 GOLGA8DPQ0D2H9 430 aa14.54□□□□□ -0.08
SLC28A1-203ENST00000394573 DDX54Q8TDD1 881 aaKnown RBP14.54□□□□□ -0.08
SLC28A1-203ENST00000394573 FAM169AQ9Y6X4 670 aa14.54□□□□□ -0.08
SLC28A1-203ENST00000394573 MAP2K7O14733 419 aa14.53□□□□□ -0.08
SLC28A1-203ENST00000394573 C21orf2O43822 256 aa14.53□□□□□ -0.08
SLC28A1-203ENST00000394573 AK2P54819 239 aa14.53□□□□□ -0.08
SLC28A1-203ENST00000394573 TRIM6Q9C030 488 aaPredicted RBP14.53□□□□□ -0.08
SLC28A1-203ENST00000394573 IL25Q9H293 177 aa14.53□□□□□ -0.08
SLC28A1-203ENST00000394573 CAPN7Q9Y6W3 813 aa14.53□□□□□ -0.08
SLC28A1-203ENST00000394573 ACTN3Q08043 901 aaPredicted RBP14.53□□□□□ -0.08
SLC28A1-203ENST00000394573 SNX1Q13596 522 aa14.53□□□□□ -0.08
SLC28A1-203ENST00000394573 KRT24Q2M2I5 525 aa14.53□□□□□ -0.08
SLC28A1-203ENST00000394573 TRIM65Q6PJ69 517 aa14.53□□□□□ -0.08
SLC28A1-203ENST00000394573 TEX11Q8IYF3 940 aa14.53□□□□□ -0.08
SLC28A1-203ENST00000394573 ITSN2Q9NZM3 1697 aa14.52□□□□□ -0.08
SLC28A1-203ENST00000394573 ABCC11Q96J66 1382 aa14.52□□□□□ -0.08
SLC28A1-203ENST00000394573 RDXP35241 583 aaKnown RBP14.52□□□□□ -0.08
SLC28A1-203ENST00000394573 TSPYL6Q8N831 410 aa14.52□□□□□ -0.08
SLC28A1-203ENST00000394573 KCNB2Q92953 911 aa14.52□□□□□ -0.08
SLC28A1-203ENST00000394573 ITFG2Q969R8 447 aa14.52□□□□□ -0.08
SLC28A1-203ENST00000394573 CLSTN2Q9H4D0 955 aa14.52□□□□□ -0.08
SLC28A1-203ENST00000394573 MCM8Q9UJA3 840 aa14.52□□□□□ -0.08
SLC28A1-203ENST00000394573 ODF2LQ9ULJ1 636 aa14.52□□□□□ -0.08
SLC28A1-203ENST00000394573 SFPQP23246 707 aaKnown RBP eCLIP14.52□□□□□ -0.09
SLC28A1-203ENST00000394573 ZKSCAN8Q15776 578 aaPredicted RBP14.52□□□□□ -0.09
SLC28A1-203ENST00000394573 VPS53Q5VIR6 699 aa14.52□□□□□ -0.09
SLC28A1-203ENST00000394573 AP1ARQ63HQ0 302 aa14.52□□□□□ -0.09
SLC28A1-203ENST00000394573 RUFY3Q7L099 469 aa14.52□□□□□ -0.09
SLC28A1-203ENST00000394573 ZKSCAN4Q969J2 545 aaPredicted RBP14.52□□□□□ -0.09
SLC28A1-203ENST00000394573 EHD4Q9H223 541 aa14.52□□□□□ -0.09
SLC28A1-203ENST00000394573 GCFC2P16383 781 aaKnown RBP14.51□□□□□ -0.09
SLC28A1-203ENST00000394573 HSP90B2PQ58FF3 399 aa14.51□□□□□ -0.09
SLC28A1-203ENST00000394573 AOPEPQ8N6M6 819 aa14.51□□□□□ -0.09
SLC28A1-203ENST00000394573 WDR24Q96S15 920 aa14.51□□□□□ -0.09
SLC28A1-203ENST00000394573 MIS18AQ9NYP9 233 aa14.51□□□□□ -0.09
SLC28A1-203ENST00000394573 SHPRHQ149N8 1683 aa14.51□□□□□ -0.09
SLC28A1-203ENST00000394573 KRT85P78386 507 aa14.51□□□□□ -0.09
SLC28A1-203ENST00000394573 NECAB1Q8N987 351 aa14.51□□□□□ -0.09
SLC28A1-203ENST00000394573 CENPHQ9H3R5 247 aa14.51□□□□□ -0.09
SLC28A1-203ENST00000394573 WDR62O43379 1518 aa14.51□□□□□ -0.09
SLC28A1-203ENST00000394573 CLTCL1P53675 1640 aa14.51□□□□□ -0.09
SLC28A1-203ENST00000394573 IRX1P78414 480 aaPredicted RBP14.51□□□□□ -0.09
SLC28A1-203ENST00000394573 PSMD2Q13200 908 aa14.51□□□□□ -0.09
SLC28A1-203ENST00000394573 SARM1Q6SZW1 724 aa14.51□□□□□ -0.09
SLC28A1-203ENST00000394573 CDC37L1Q7L3B6 337 aa14.51□□□□□ -0.09
SLC28A1-203ENST00000394573 CFAP53Q96M91 514 aa14.51□□□□□ -0.09
SLC28A1-203ENST00000394573 THUMPD2Q9BTF0 503 aaKnown RBP14.51□□□□□ -0.09
SLC28A1-203ENST00000394573 PUF60Q9UHX1 559 aaKnown RBP14.51□□□□□ -0.09
SLC28A1-203ENST00000394573 RPS6KL1Q9Y6S9 549 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms