RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 TMEM57Q8N5G2 664 aa7.42□□□□□ -1.22
CASC3-202ENST00000394114 MRPL50Q8N5N7 158 aaKnown RBP7.42□□□□□ -1.22
CASC3-202ENST00000394114 MOXD2PA6NHM9 499 aa7.41□□□□□ -1.22
CASC3-202ENST00000394114 SOWAHDA6NJG2 315 aa7.41□□□□□ -1.22
CASC3-202ENST00000394114 RAPGEF4Q8WZA2 1011 aa7.41□□□□□ -1.22
CASC3-202ENST00000394114 UBAP1LF5GYI3 381 aa7.41□□□□□ -1.22
CASC3-202ENST00000394114 MVPQ14764 893 aaKnown RBP7.41□□□□□ -1.22
CASC3-202ENST00000394114 C1orf141Q5JVX7 400 aa7.41□□□□□ -1.22
CASC3-202ENST00000394114 NPAS4Q8IUM7 802 aa7.41□□□□□ -1.22
CASC3-202ENST00000394114 HMX1Q9NP08 348 aaPredicted RBP7.41□□□□□ -1.22
CASC3-202ENST00000394114 STRN4Q9NRL3 753 aa7.41□□□□□ -1.22
CASC3-202ENST00000394114 PCDHB15Q9Y5E8 787 aa7.41□□□□□ -1.22
CASC3-202ENST00000394114 VIRMAQ69YN4 1812 aaKnown RBP7.41□□□□□ -1.22
CASC3-202ENST00000394114 NHSL1Q5SYE7 1610 aa7.4□□□□□ -1.22
CASC3-202ENST00000394114 ROBO1Q9Y6N7 1651 aa7.4□□□□□ -1.22
CASC3-202ENST00000394114 IPO8O15397 1037 aaKnown RBP7.4□□□□□ -1.22
CASC3-202ENST00000394114 IGHDP01880 384 aa7.4□□□□□ -1.22
CASC3-202ENST00000394114 HTATSF1O43719 755 aaKnown RBP7.4□□□□□ -1.23
CASC3-202ENST00000394114 CD46P15529 392 aa7.4□□□□□ -1.23
CASC3-202ENST00000394114 SSFA2P28290 1259 aa7.4□□□□□ -1.23
CASC3-202ENST00000394114 TEFQ10587 303 aa7.4□□□□□ -1.23
CASC3-202ENST00000394114 SF3A1Q15459 793 aaKnown RBP7.4□□□□□ -1.23
CASC3-202ENST00000394114 TAF7Q15545 349 aaPredicted RBP7.4□□□□□ -1.23
CASC3-202ENST00000394114 TBC1D9Q6ZT07 1266 aa7.4□□□□□ -1.23
CASC3-202ENST00000394114 TOM1L2Q6ZVM7 507 aa7.4□□□□□ -1.23
CASC3-202ENST00000394114 STK32AQ8WU08 396 aa7.4□□□□□ -1.23
CASC3-202ENST00000394114 MEGF6O75095 1541 aa7.39□□□□□ -1.23
CASC3-202ENST00000394114 LRRC37A3O60309 1634 aa7.39□□□□□ -1.23
CASC3-202ENST00000394114 LTBP4Q8N2S1 1624 aa7.39□□□□□ -1.23
CASC3-202ENST00000394114 CAMTA1Q9Y6Y1 1673 aa7.39□□□□□ -1.23
CASC3-202ENST00000394114 ABCA3Q99758 1704 aa7.39□□□□□ -1.23
CASC3-202ENST00000394114 KCNQ3O43525 872 aa7.39□□□□□ -1.23
CASC3-202ENST00000394114 PRKAR2AP13861 404 aaKnown RBP7.39□□□□□ -1.23
CASC3-202ENST00000394114 MARSP56192 900 aaKnown RBP7.39□□□□□ -1.23
CASC3-202ENST00000394114 KDM2BQ8NHM5 1336 aa7.39□□□□□ -1.23
CASC3-202ENST00000394114 TATP17735 454 aaPredicted RBP7.39□□□□□ -1.23
CASC3-202ENST00000394114 AMOTQ4VCS5 1084 aa7.39□□□□□ -1.23
CASC3-202ENST00000394114 AKAP4Q5JQC9 854 aa7.39□□□□□ -1.23
CASC3-202ENST00000394114 PRPF38BQ5VTL8 546 aaKnown RBP7.39□□□□□ -1.23
CASC3-202ENST00000394114 CPDO75976 1380 aa7.39□□□□□ -1.23
CASC3-202ENST00000394114 FAM208AQ9UK61 1670 aaKnown RBP7.39□□□□□ -1.23
CASC3-202ENST00000394114 NAALADL2Q58DX5 795 aa7.38□□□□□ -1.23
CASC3-202ENST00000394114 PADI6Q6TGC4 694 aa7.38□□□□□ -1.23
CASC3-202ENST00000394114 CENPQQ7L2Z9 268 aaPredicted RBP7.38□□□□□ -1.23
CASC3-202ENST00000394114 NCAPD2Q15021 1401 aa7.38□□□□□ -1.23
CASC3-202ENST00000394114 LMO7Q8WWI1 1683 aa7.38□□□□□ -1.23
CASC3-202ENST00000394114 KAT6BQ8WYB5 2073 aa7.38□□□□□ -1.23
CASC3-202ENST00000394114 ZC3H4Q9UPT8 1303 aaKnown RBP7.38□□□□□ -1.23
CASC3-202ENST00000394114 RNMTO43148 476 aaKnown RBP7.38□□□□□ -1.23
CASC3-202ENST00000394114 ATP9BO43861 1147 aa7.38□□□□□ -1.23
CASC3-202ENST00000394114 RGS3P49796 1198 aa7.38□□□□□ -1.23
CASC3-202ENST00000394114 G2E3Q7L622 706 aa7.38□□□□□ -1.23
CASC3-202ENST00000394114 SRCAPQ6ZRS2 3230 aa7.37□□□□□ -1.23
CASC3-202ENST00000394114 CEMIPQ8WUJ3 1361 aa7.37□□□□□ -1.23
CASC3-202ENST00000394114 ANKRD33BA6NCL7 494 aa7.37□□□□□ -1.23
CASC3-202ENST00000394114 NUTM2BA6NNL0 878 aaPredicted RBP7.37□□□□□ -1.23
CASC3-202ENST00000394114 BTBD11A6QL63 1104 aa7.37□□□□□ -1.23
CASC3-202ENST00000394114 NUTM2EB1AL46 878 aaPredicted RBP7.37□□□□□ -1.23
CASC3-202ENST00000394114 NDUFV2P19404 249 aa7.37□□□□□ -1.23
CASC3-202ENST00000394114 EIF2S2P20042 333 aaKnown RBP7.37□□□□□ -1.23
CASC3-202ENST00000394114 EVA1CP58658 441 aa7.37□□□□□ -1.23
CASC3-202ENST00000394114 LARP1Q6PKG0 1096 aaKnown RBP7.37□□□□□ -1.23
CASC3-202ENST00000394114 NUTM2AQ8IVF1 878 aaPredicted RBP7.37□□□□□ -1.23
CASC3-202ENST00000394114 DDX19BQ9UMR2 479 aa7.37□□□□□ -1.23
CASC3-202ENST00000394114 RECKO95980 971 aa7.37□□□□□ -1.23
CASC3-202ENST00000394114 TTC13Q8NBP0 860 aa7.37□□□□□ -1.23
CASC3-202ENST00000394114 PHF12Q96QT6 1004 aa7.37□□□□□ -1.23
CASC3-202ENST00000394114 RBM19Q9Y4C8 960 aaKnown RBP7.37□□□□□ -1.23
CASC3-202ENST00000394114 WDR17Q8IZU2 1322 aa7.37□□□□□ -1.23
CASC3-202ENST00000394114 F6X3S4 739 aa7.37□□□□□ -1.23
CASC3-202ENST00000394114 NUTM1Q86Y26 1132 aa7.37□□□□□ -1.23
CASC3-202ENST00000394114 PDCD7Q8N8D1 485 aaKnown RBP7.37□□□□□ -1.23
CASC3-202ENST00000394114 BTG4Q9NY30 223 aa7.37□□□□□ -1.23
CASC3-202ENST00000394114 COL5A2P05997 1499 aaPredicted RBP7.36□□□□□ -1.23
CASC3-202ENST00000394114 CYP27B1O15528 508 aa7.36□□□□□ -1.23
CASC3-202ENST00000394114 ADAMTS2O95450 1211 aa7.36□□□□□ -1.23
CASC3-202ENST00000394114 PHKG2P15735 406 aa7.36□□□□□ -1.23
CASC3-202ENST00000394114 SLC39A6Q13433 755 aa7.36□□□□□ -1.23
CASC3-202ENST00000394114 SLC4A10Q6U841 1118 aa7.36□□□□□ -1.23
CASC3-202ENST00000394114 STK31Q9BXU1 1019 aa7.36□□□□□ -1.23
CASC3-202ENST00000394114 SPG7Q9UQ90 795 aa7.36□□□□□ -1.23
CASC3-202ENST00000394114 ANXA1P04083 346 aa7.36□□□□□ -1.23
CASC3-202ENST00000394114 C7P10643 843 aa7.36□□□□□ -1.23
CASC3-202ENST00000394114 NFATC2IPQ8NCF5 419 aa7.36□□□□□ -1.23
CASC3-202ENST00000394114 API5Q9BZZ5 524 aaKnown RBP7.36□□□□□ -1.23
CASC3-202ENST00000394114 PPP1R1BQ9UD71 204 aaPredicted RBP7.36□□□□□ -1.23
CASC3-202ENST00000394114 EP400Q96L91 3159 aa7.35□□□□□ -1.23
CASC3-202ENST00000394114 ABCC4O15439 1325 aa7.35□□□□□ -1.23
CASC3-202ENST00000394114 PRAMEF22A3QJZ6 481 aa7.35□□□□□ -1.23
CASC3-202ENST00000394114 ANKRD62A6NC57 917 aa7.35□□□□□ -1.23
CASC3-202ENST00000394114 TTLL13PA6NNM8 815 aa7.35□□□□□ -1.23
CASC3-202ENST00000394114 EIF4A1P60842 406 aaKnown RBP7.35□□□□□ -1.23
CASC3-202ENST00000394114 SEMA3FQ13275 785 aa7.35□□□□□ -1.23
CASC3-202ENST00000394114 SLAIN1Q8ND83 568 aa7.35□□□□□ -1.23
CASC3-202ENST00000394114 DDX54Q8TDD1 881 aaKnown RBP7.35□□□□□ -1.23
CASC3-202ENST00000394114 ARHGAP45Q92619 1136 aa7.35□□□□□ -1.23
CASC3-202ENST00000394114 ZBTB40Q9NUA8 1239 aa7.35□□□□□ -1.23
CASC3-202ENST00000394114 NOVA2Q9UNW9 492 aaKnown RBP7.35□□□□□ -1.23
CASC3-202ENST00000394114 PCDHGA10Q9Y5H3 936 aa7.35□□□□□ -1.23
CASC3-202ENST00000394114 KDM6AO15550 1401 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms