RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 CAMK4Q16566 473 aa26.92■■□□□ 1.9
RARA-202ENST00000394081 KRT222Q8N1A0 295 aa26.92■■□□□ 1.9
RARA-202ENST00000394081 SPATA32Q96LK8 384 aa26.92■■□□□ 1.9
RARA-202ENST00000394081 CDC37L1Q7L3B6 337 aa26.92■■□□□ 1.9
RARA-202ENST00000394081 MRFAP1L1Q96HT8 127 aa26.92■■□□□ 1.9
RARA-202ENST00000394081 KCND1Q9NSA2 647 aa26.92■■□□□ 1.9
RARA-202ENST00000394081 NRBP1Q9UHY1 535 aa26.92■■□□□ 1.9
RARA-202ENST00000394081 HIP1O00291 1037 aa26.91■■□□□ 1.9
RARA-202ENST00000394081 CACTINQ8WUQ7 758 aaKnown RBP26.91■■□□□ 1.9
RARA-202ENST00000394081 FAM53CQ9NYF3 392 aa26.91■■□□□ 1.9
RARA-202ENST00000394081 GPATCH3Q96I76 525 aa26.91■■□□□ 1.9
RARA-202ENST00000394081 CHMP4AQ9BY43 222 aa26.91■■□□□ 1.9
RARA-202ENST00000394081 SNRKQ9NRH2 765 aa26.91■■□□□ 1.9
RARA-202ENST00000394081 TPCN1Q9ULQ1 816 aa26.91■■□□□ 1.9
RARA-202ENST00000394081 GNAT3A8MTJ3 354 aa26.9■■□□□ 1.9
RARA-202ENST00000394081 CKAP2LQ8IYA6 745 aa26.9■■□□□ 1.9
RARA-202ENST00000394081 LEO1Q8WVC0 666 aaPredicted RBP26.9■■□□□ 1.9
RARA-202ENST00000394081 ACEP12821 1306 aa26.9■■□□□ 1.9
RARA-202ENST00000394081 AGLP35573 1532 aa26.89■■□□□ 1.9
RARA-202ENST00000394081 CCDC66A2RUB6 948 aa26.89■■□□□ 1.9
RARA-202ENST00000394081 NYAP1Q6ZVC0 841 aa26.89■■□□□ 1.9
RARA-202ENST00000394081 EVI5LQ96CN4 794 aa26.89■■□□□ 1.9
RARA-202ENST00000394081 TERF2Q15554 542 aa26.88■■□□□ 1.89
RARA-202ENST00000394081 RNF20Q5VTR2 975 aa26.88■■□□□ 1.89
RARA-202ENST00000394081 LRRC8AQ8IWT6 810 aa26.88■■□□□ 1.89
RARA-202ENST00000394081 ECHDC1Q9NTX5 307 aa26.88■■□□□ 1.89
RARA-202ENST00000394081 A0A0U1RQG5 324 aaPredicted RBP26.88■■□□□ 1.89
RARA-202ENST00000394081 KIF2AO00139 706 aaPredicted RBP26.88■■□□□ 1.89
RARA-202ENST00000394081 MTX1Q13505 466 aa26.88■■□□□ 1.89
RARA-202ENST00000394081 MAP4K1Q92918 833 aa26.88■■□□□ 1.89
RARA-202ENST00000394081 CREB3L3Q68CJ9 461 aa26.87■■□□□ 1.89
RARA-202ENST00000394081 CLASRPQ8N2M8 674 aaKnown RBP26.87■■□□□ 1.89
RARA-202ENST00000394081 NECAB1Q8N987 351 aa26.87■■□□□ 1.89
RARA-202ENST00000394081 ERO1AQ96HE7 468 aa26.87■■□□□ 1.89
RARA-202ENST00000394081 CEP170BQ9Y4F5 1589 aaPredicted RBP26.87■■□□□ 1.89
RARA-202ENST00000394081 TAF7Q15545 349 aaPredicted RBP26.86■■□□□ 1.89
RARA-202ENST00000394081 RBM8AQ9Y5S9 174 aaKnown RBP26.86■■□□□ 1.89
RARA-202ENST00000394081 TSPOAP1O95153 1857 aa26.86■■□□□ 1.89
RARA-202ENST00000394081 CTAGE5O15320 804 aa26.85■■□□□ 1.89
RARA-202ENST00000394081 PTPN14Q15678 1187 aa26.85■■□□□ 1.89
RARA-202ENST00000394081 ERC1Q8IUD2 1116 aa26.85■■□□□ 1.89
RARA-202ENST00000394081 PTPRUQ92729 1446 aa26.85■■□□□ 1.89
RARA-202ENST00000394081 CCDC144BQ3MJ40 725 aa26.85■■□□□ 1.89
RARA-202ENST00000394081 HDGFL1Q5TGJ6 251 aa26.85■■□□□ 1.89
RARA-202ENST00000394081 FERMT3Q86UX7 667 aa26.85■■□□□ 1.89
RARA-202ENST00000394081 CCDC144CPQ8IYA2 1237 aa26.85■■□□□ 1.89
RARA-202ENST00000394081 EYA1Q99502 592 aa26.85■■□□□ 1.89
RARA-202ENST00000394081 CHMP3Q9Y3E7 222 aa26.85■■□□□ 1.89
RARA-202ENST00000394081 IQCB1Q15051 598 aa26.84■■□□□ 1.89
RARA-202ENST00000394081 DNAJC25Q9H1X3 360 aa26.84■■□□□ 1.89
RARA-202ENST00000394081 GOLGA6L19H0YKK7 550 aa26.83■■□□□ 1.89
RARA-202ENST00000394081 FGD1P98174 961 aa26.83■■□□□ 1.89
RARA-202ENST00000394081 IGSF3O75054 1194 aa26.83■■□□□ 1.89
RARA-202ENST00000394081 HOXB7P09629 217 aa26.83■■□□□ 1.89
RARA-202ENST00000394081 HDGFP51858 240 aaKnown RBP26.83■■□□□ 1.89
RARA-202ENST00000394081 NR1I2O75469 434 aa26.82■■□□□ 1.88
RARA-202ENST00000394081 BLOC1S2Q6QNY1 142 aa26.82■■□□□ 1.88
RARA-202ENST00000394081 NECTIN2Q92692 538 aa26.82■■□□□ 1.88
RARA-202ENST00000394081 TSGA10IPQ3SY00 556 aa26.82■■□□□ 1.88
RARA-202ENST00000394081 KMT5BQ4FZB7 885 aa26.82■■□□□ 1.88
RARA-202ENST00000394081 SLC27A2O14975 620 aa26.81■■□□□ 1.88
RARA-202ENST00000394081 BEND3Q5T5X7 828 aa26.81■■□□□ 1.88
RARA-202ENST00000394081 BICD2Q8TD16 824 aa26.81■■□□□ 1.88
RARA-202ENST00000394081 HMG20BQ9P0W2 317 aa26.81■■□□□ 1.88
RARA-202ENST00000394081 HDAC5Q9UQL6 1122 aa26.81■■□□□ 1.88
RARA-202ENST00000394081 RPS6KB1P23443 525 aa26.81■■□□□ 1.88
RARA-202ENST00000394081 NAA30Q147X3 362 aaPredicted RBP26.81■■□□□ 1.88
RARA-202ENST00000394081 PGBD1Q96JS3 809 aa26.81■■□□□ 1.88
RARA-202ENST00000394081 ZSCAN16Q9H4T2 348 aaPredicted RBP26.81■■□□□ 1.88
RARA-202ENST00000394081 NBPF7P0C2Y1 421 aaPredicted RBP26.8■■□□□ 1.88
RARA-202ENST00000394081 FAM173BQ6P4H8 233 aa26.8■■□□□ 1.88
RARA-202ENST00000394081 CFAP45Q9UL16 551 aa26.8■■□□□ 1.88
RARA-202ENST00000394081 ZNF215Q9UL58 517 aaPredicted RBP26.8■■□□□ 1.88
RARA-202ENST00000394081 KCNJ4P48050 445 aa26.79■■□□□ 1.88
RARA-202ENST00000394081 OS9Q13438 667 aaPredicted RBP26.79■■□□□ 1.88
RARA-202ENST00000394081 STX1AQ16623 288 aa26.79■■□□□ 1.88
RARA-202ENST00000394081 LARP1Q6PKG0 1096 aaKnown RBP26.79■■□□□ 1.88
RARA-202ENST00000394081 DNAAF4Q8WXU2 420 aa26.79■■□□□ 1.88
RARA-202ENST00000394081 PHAXQ9H814 394 aaKnown RBP26.79■■□□□ 1.88
RARA-202ENST00000394081 JCADQ9P266 1359 aa26.78■■□□□ 1.88
RARA-202ENST00000394081 SKILP12757 684 aa26.78■■□□□ 1.88
RARA-202ENST00000394081 IL17REQ8NFR9 667 aa26.78■■□□□ 1.88
RARA-202ENST00000394081 TFIP11Q9UBB9 837 aaKnown RBP26.78■■□□□ 1.88
RARA-202ENST00000394081 SLU7O95391 586 aaKnown RBP26.78■■□□□ 1.88
RARA-202ENST00000394081 TUBB4AP04350 444 aa26.78■■□□□ 1.88
RARA-202ENST00000394081 IFIT2P09913 472 aaKnown RBP26.78■■□□□ 1.88
RARA-202ENST00000394081 GSDMDP57764 484 aa26.78■■□□□ 1.88
RARA-202ENST00000394081 NPHP4O75161 1426 aaPredicted RBP26.77■■□□□ 1.88
RARA-202ENST00000394081 ZNF592Q92610 1267 aa26.77■■□□□ 1.88
RARA-202ENST00000394081 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.77■■□□□ 1.88
RARA-202ENST00000394081 RESTQ13127 1097 aa26.77■■□□□ 1.88
RARA-202ENST00000394081 DHX8Q14562 1220 aaKnown RBP26.77■■□□□ 1.88
RARA-202ENST00000394081 CCAR2Q8N163 923 aaKnown RBP26.77■■□□□ 1.88
RARA-202ENST00000394081 ROBO2Q9HCK4 1378 aa26.76■■□□□ 1.87
RARA-202ENST00000394081 CCZ1BP86790 482 aa26.76■■□□□ 1.87
RARA-202ENST00000394081 CCZ1P86791 482 aaPredicted RBP26.76■■□□□ 1.87
RARA-202ENST00000394081 TOB2Q14106 344 aaPredicted RBP26.76■■□□□ 1.87
RARA-202ENST00000394081 AMPHP49418 695 aa26.75■■□□□ 1.87
RARA-202ENST00000394081 AEBP2Q6ZN18 517 aaPredicted RBP26.75■■□□□ 1.87
RARA-202ENST00000394081 DIP2AQ14689 1571 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms