RNA–Protein interactions for RNA: ENST00000391783.6

ZNF28-202, Transcript of zinc finger protein 28, humanhuman

TSL 2

Gene ZNF28, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-202ENST00000391783 PSMD1Q99460 953 aa11.16□□□□□ -0.62
ZNF28-202ENST00000391783 PRKRIP1Q9H875 184 aaPredicted RBP11.16□□□□□ -0.62
ZNF28-202ENST00000391783 SNED1Q8TER0 1413 aa11.16□□□□□ -0.62
ZNF28-202ENST00000391783 NEUROD2Q15784 382 aa11.16□□□□□ -0.62
ZNF28-202ENST00000391783 PROSER3Q2NL68 480 aa11.16□□□□□ -0.62
ZNF28-202ENST00000391783 HSP90AB3PQ58FF7 597 aa11.16□□□□□ -0.62
ZNF28-202ENST00000391783 JMYQ8N9B5 988 aa11.16□□□□□ -0.62
ZNF28-202ENST00000391783 RPGRQ92834 1020 aaKnown RBP11.16□□□□□ -0.62
ZNF28-202ENST00000391783 RBM17Q96I25 401 aaKnown RBP11.16□□□□□ -0.62
ZNF28-202ENST00000391783 DDX21Q9NR30 783 aaKnown RBP eCLIP11.16□□□□□ -0.62
ZNF28-202ENST00000391783 RNF123Q5XPI4 1314 aa11.15□□□□□ -0.62
ZNF28-202ENST00000391783 SCN4AP35499 1836 aa11.15□□□□□ -0.62
ZNF28-202ENST00000391783 HOXB7P09629 217 aa11.15□□□□□ -0.62
ZNF28-202ENST00000391783 IARSP41252 1262 aaKnown RBP11.15□□□□□ -0.62
ZNF28-202ENST00000391783 OLFM4Q6UX06 510 aa11.15□□□□□ -0.62
ZNF28-202ENST00000391783 COPS6Q7L5N1 327 aa11.15□□□□□ -0.62
ZNF28-202ENST00000391783 UTP14AQ9BVJ6 771 aaKnown RBP11.15□□□□□ -0.62
ZNF28-202ENST00000391783 ZNF277Q9NRM2 450 aaPredicted RBP11.15□□□□□ -0.62
ZNF28-202ENST00000391783 ANKRD36CQ5JPF3 1778 aa11.15□□□□□ -0.63
ZNF28-202ENST00000391783 IQCA1LA6NCM1 817 aa11.14□□□□□ -0.63
ZNF28-202ENST00000391783 ANXA1P04083 346 aa11.14□□□□□ -0.63
ZNF28-202ENST00000391783 HTRA3P83110 453 aa11.14□□□□□ -0.63
ZNF28-202ENST00000391783 CHADLQ6NUI6 762 aa11.14□□□□□ -0.63
ZNF28-202ENST00000391783 XAGE3Q8WTP9 111 aa11.14□□□□□ -0.63
ZNF28-202ENST00000391783 NLRP3Q96P20 1036 aa11.14□□□□□ -0.63
ZNF28-202ENST00000391783 FZD9O00144 591 aa11.14□□□□□ -0.63
ZNF28-202ENST00000391783 TCIRG1Q13488 830 aa11.14□□□□□ -0.63
ZNF28-202ENST00000391783 IFFO2Q5TF58 517 aa11.14□□□□□ -0.63
ZNF28-202ENST00000391783 CFAP44Q96MT7 982 aa11.14□□□□□ -0.63
ZNF28-202ENST00000391783 CEP350Q5VT06 3117 aa11.13□□□□□ -0.63
ZNF28-202ENST00000391783 MAPK8IP2Q13387 824 aaPredicted RBP11.13□□□□□ -0.63
ZNF28-202ENST00000391783 TAF1DQ9H5J8 278 aaPredicted RBP11.13□□□□□ -0.63
ZNF28-202ENST00000391783 LAS1LQ9Y4W2 734 aaKnown RBP11.13□□□□□ -0.63
ZNF28-202ENST00000391783 AIMP1Q12904 312 aaKnown RBP11.12□□□□□ -0.63
ZNF28-202ENST00000391783 KRT24Q2M2I5 525 aa11.12□□□□□ -0.63
ZNF28-202ENST00000391783 C3orf67Q6ZVT6 689 aa11.12□□□□□ -0.63
ZNF28-202ENST00000391783 NLRP10Q86W26 655 aa11.12□□□□□ -0.63
ZNF28-202ENST00000391783 NECTIN2Q92692 538 aa11.12□□□□□ -0.63
ZNF28-202ENST00000391783 ZNF541Q9H0D2 1346 aa11.12□□□□□ -0.63
ZNF28-202ENST00000391783 PPEF1O14829 653 aaPredicted RBP11.12□□□□□ -0.63
ZNF28-202ENST00000391783 ZNF853P0CG23 659 aa11.12□□□□□ -0.63
ZNF28-202ENST00000391783 LDHDQ86WU2 507 aa11.12□□□□□ -0.63
ZNF28-202ENST00000391783 JDP2Q8WYK2 163 aa11.12□□□□□ -0.63
ZNF28-202ENST00000391783 VPS33BQ9H267 617 aa11.12□□□□□ -0.63
ZNF28-202ENST00000391783 HACL1Q9UJ83 578 aa11.12□□□□□ -0.63
ZNF28-202ENST00000391783 BBOX1O75936 387 aa11.11□□□□□ -0.63
ZNF28-202ENST00000391783 POTEIP0CG38 1075 aa11.11□□□□□ -0.63
ZNF28-202ENST00000391783 POTEJP0CG39 1038 aa11.11□□□□□ -0.63
ZNF28-202ENST00000391783 HDGFL1Q5TGJ6 251 aa11.11□□□□□ -0.63
ZNF28-202ENST00000391783 GPC2Q8N158 579 aa11.11□□□□□ -0.63
ZNF28-202ENST00000391783 PLBD2Q8NHP8 589 aa11.11□□□□□ -0.63
ZNF28-202ENST00000391783 CHPF2Q9P2E5 772 aa11.11□□□□□ -0.63
ZNF28-202ENST00000391783 DBF4Q9UBU7 674 aaPredicted RBP11.11□□□□□ -0.63
ZNF28-202ENST00000391783 ATP6V0A2Q9Y487 856 aa11.11□□□□□ -0.63
ZNF28-202ENST00000391783 EIF6P56537 245 aaKnown RBP11.1□□□□□ -0.63
ZNF28-202ENST00000391783 CALD1Q05682 793 aaKnown RBP11.1□□□□□ -0.63
ZNF28-202ENST00000391783 DUSP27Q5VZP5 1158 aa11.1□□□□□ -0.63
ZNF28-202ENST00000391783 ANKRD13DQ6ZTN6 518 aa11.1□□□□□ -0.63
ZNF28-202ENST00000391783 ISCA1Q9BUE6 129 aa11.1□□□□□ -0.63
ZNF28-202ENST00000391783 TMX4Q9H1E5 349 aaPredicted RBP11.1□□□□□ -0.63
ZNF28-202ENST00000391783 HYPKQ9NX55 129 aa11.1□□□□□ -0.63
ZNF28-202ENST00000391783 TRMT112Q9UI30 125 aaKnown RBP11.1□□□□□ -0.63
ZNF28-202ENST00000391783 LAMB2P55268 1798 aa11.1□□□□□ -0.63
ZNF28-202ENST00000391783 APAF1O14727 1248 aa11.09□□□□□ -0.63
ZNF28-202ENST00000391783 GNAI1P63096 354 aa11.09□□□□□ -0.63
ZNF28-202ENST00000391783 SP8Q8IXZ3 490 aa11.09□□□□□ -0.63
ZNF28-202ENST00000391783 CREBZFQ9NS37 354 aa11.09□□□□□ -0.63
ZNF28-202ENST00000391783 MBIPQ9NS73 344 aa11.09□□□□□ -0.63
ZNF28-202ENST00000391783 IFT57Q9NWB7 429 aa11.09□□□□□ -0.63
ZNF28-202ENST00000391783 ABCC4O15439 1325 aa11.09□□□□□ -0.63
ZNF28-202ENST00000391783 SH3TC1Q8TE82 1336 aa11.09□□□□□ -0.63
ZNF28-202ENST00000391783 HCLS1P14317 486 aaPredicted RBP11.09□□□□□ -0.63
ZNF28-202ENST00000391783 EPHX2P34913 555 aa11.09□□□□□ -0.63
ZNF28-202ENST00000391783 TRIM28Q13263 835 aaKnown RBP11.09□□□□□ -0.63
ZNF28-202ENST00000391783 PNMA8AQ86V59 439 aaPredicted RBP11.09□□□□□ -0.63
ZNF28-202ENST00000391783 LARGE2Q8N3Y3 721 aa11.09□□□□□ -0.63
ZNF28-202ENST00000391783 SUPT20HQ8NEM7 779 aa11.09□□□□□ -0.63
ZNF28-202ENST00000391783 RTFDC1Q9BY42 306 aaPredicted RBP11.09□□□□□ -0.63
ZNF28-202ENST00000391783 PASKQ96RG2 1323 aa11.09□□□□□ -0.63
ZNF28-202ENST00000391783 ADAMTSL1Q8N6G6 1762 aa11.09□□□□□ -0.63
ZNF28-202ENST00000391783 COL4A5P29400 1685 aa11.08□□□□□ -0.64
ZNF28-202ENST00000391783 TCERG1O14776 1098 aaKnown RBP11.08□□□□□ -0.64
ZNF28-202ENST00000391783 ITGBL1O95965 494 aaPredicted RBP11.08□□□□□ -0.64
ZNF28-202ENST00000391783 DDX46Q7L014 1031 aaKnown RBP11.08□□□□□ -0.64
ZNF28-202ENST00000391783 TMC4Q7Z404 712 aa11.08□□□□□ -0.64
ZNF28-202ENST00000391783 CHMP4AQ9BY43 222 aa11.07□□□□□ -0.64
ZNF28-202ENST00000391783 PPIP5K2O43314 1243 aa11.07□□□□□ -0.64
ZNF28-202ENST00000391783 GRAPQ13588 217 aa11.07□□□□□ -0.64
ZNF28-202ENST00000391783 SF3B3Q15393 1217 aaKnown RBP11.07□□□□□ -0.64
ZNF28-202ENST00000391783 EAPPQ56P03 285 aaPredicted RBP11.07□□□□□ -0.64
ZNF28-202ENST00000391783 NIM1KQ8IY84 436 aa11.07□□□□□ -0.64
ZNF28-202ENST00000391783 MPNDQ8N594 471 aa11.07□□□□□ -0.64
ZNF28-202ENST00000391783 GRAPLQ8TC17 118 aaPredicted RBP11.07□□□□□ -0.64
ZNF28-202ENST00000391783 CLEC11AQ9Y240 323 aa11.07□□□□□ -0.64
ZNF28-202ENST00000391783 GJA3Q9Y6H8 435 aa11.07□□□□□ -0.64
ZNF28-202ENST00000391783 DDX60Q8IY21 1712 aaKnown RBP11.06□□□□□ -0.64
ZNF28-202ENST00000391783 SLC51AQ86UW1 340 aa11.06□□□□□ -0.64
ZNF28-202ENST00000391783 LMOD1P29536 600 aaPredicted RBP11.05□□□□□ -0.64
ZNF28-202ENST00000391783 AOC3Q16853 763 aa11.05□□□□□ -0.64
ZNF28-202ENST00000391783 DPP8Q6V1X1 898 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms