RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 ADAMTS8Q9UP79 889 aa14.02□□□□□ -0.17
TRAV4-201ENST00000390426 NUP98P52948 1817 aa14.01□□□□□ -0.17
TRAV4-201ENST00000390426 ZNF541Q9H0D2 1346 aa14.01□□□□□ -0.17
TRAV4-201ENST00000390426 TCERG1O14776 1098 aaKnown RBP14.01□□□□□ -0.17
TRAV4-201ENST00000390426 HOXA10P31260 410 aaPredicted RBP14.01□□□□□ -0.17
TRAV4-201ENST00000390426 IARSP41252 1262 aaKnown RBP14.01□□□□□ -0.17
TRAV4-201ENST00000390426 PARP10Q53GL7 1025 aa14.01□□□□□ -0.17
TRAV4-201ENST00000390426 CHADLQ6NUI6 762 aa14.01□□□□□ -0.17
TRAV4-201ENST00000390426 C3orf67Q6ZVT6 689 aa14.01□□□□□ -0.17
TRAV4-201ENST00000390426 COPS6Q7L5N1 327 aa14.01□□□□□ -0.17
TRAV4-201ENST00000390426 TRIM35Q9UPQ4 493 aa14.01□□□□□ -0.17
TRAV4-201ENST00000390426 IBTKQ9P2D0 1353 aaPredicted RBP14□□□□□ -0.17
TRAV4-201ENST00000390426 CHL1O00533 1208 aa14□□□□□ -0.17
TRAV4-201ENST00000390426 SLC51AQ86UW1 340 aa14□□□□□ -0.17
TRAV4-201ENST00000390426 JMYQ8N9B5 988 aa14□□□□□ -0.17
TRAV4-201ENST00000390426 XAGE3Q8WTP9 111 aa14□□□□□ -0.17
TRAV4-201ENST00000390426 RBM17Q96I25 401 aaKnown RBP14□□□□□ -0.17
TRAV4-201ENST00000390426 UTP14AQ9BVJ6 771 aaKnown RBP14□□□□□ -0.17
TRAV4-201ENST00000390426 IQCA1LA6NCM1 817 aa13.99□□□□□ -0.17
TRAV4-201ENST00000390426 CC2D2BQ6DHV5 1058 aa13.99□□□□□ -0.17
TRAV4-201ENST00000390426 L3MBTL3Q96JM7 780 aaPredicted RBP13.99□□□□□ -0.17
TRAV4-201ENST00000390426 NLRP3Q96P20 1036 aa13.99□□□□□ -0.17
TRAV4-201ENST00000390426 CRAMP1Q96RY5 1269 aa13.99□□□□□ -0.17
TRAV4-201ENST00000390426 PSMD1Q99460 953 aa13.99□□□□□ -0.17
TRAV4-201ENST00000390426 TAF1DQ9H5J8 278 aaPredicted RBP13.99□□□□□ -0.17
TRAV4-201ENST00000390426 RIC1Q4ADV7 1423 aa13.98□□□□□ -0.17
TRAV4-201ENST00000390426 FZD9O00144 591 aa13.98□□□□□ -0.17
TRAV4-201ENST00000390426 PPEF1O14829 653 aaPredicted RBP13.98□□□□□ -0.17
TRAV4-201ENST00000390426 EAPPQ56P03 285 aaPredicted RBP13.98□□□□□ -0.17
TRAV4-201ENST00000390426 DDX21Q9NR30 783 aaKnown RBP eCLIP13.98□□□□□ -0.17
TRAV4-201ENST00000390426 SLC10A5Q5PT55 438 aa13.97□□□□□ -0.17
TRAV4-201ENST00000390426 NLRP10Q86W26 655 aa13.97□□□□□ -0.17
TRAV4-201ENST00000390426 JDP2Q8WYK2 163 aa13.97□□□□□ -0.17
TRAV4-201ENST00000390426 ZNF428Q96B54 188 aa13.97□□□□□ -0.17
TRAV4-201ENST00000390426 PRKRIP1Q9H875 184 aaPredicted RBP13.97□□□□□ -0.17
TRAV4-201ENST00000390426 CHPF2Q9P2E5 772 aa13.97□□□□□ -0.17
TRAV4-201ENST00000390426 CLEC11AQ9Y240 323 aa13.97□□□□□ -0.17
TRAV4-201ENST00000390426 SNED1Q8TER0 1413 aa13.97□□□□□ -0.17
TRAV4-201ENST00000390426 HCLS1P14317 486 aaPredicted RBP13.96□□□□□ -0.17
TRAV4-201ENST00000390426 TCIRG1Q13488 830 aa13.96□□□□□ -0.17
TRAV4-201ENST00000390426 HSP90AB3PQ58FF7 597 aa13.96□□□□□ -0.17
TRAV4-201ENST00000390426 HDGFL1Q5TGJ6 251 aa13.96□□□□□ -0.17
TRAV4-201ENST00000390426 LDHDQ86WU2 507 aa13.96□□□□□ -0.17
TRAV4-201ENST00000390426 LARGE2Q8N3Y3 721 aa13.96□□□□□ -0.17
TRAV4-201ENST00000390426 HACL1Q9UJ83 578 aa13.96□□□□□ -0.17
TRAV4-201ENST00000390426 GJA3Q9Y6H8 435 aa13.96□□□□□ -0.17
TRAV4-201ENST00000390426 RNF123Q5XPI4 1314 aa13.95□□□□□ -0.18
TRAV4-201ENST00000390426 EPHX2P34913 555 aa13.95□□□□□ -0.18
TRAV4-201ENST00000390426 EIF6P56537 245 aaKnown RBP13.95□□□□□ -0.18
TRAV4-201ENST00000390426 TRMT112Q9UI30 125 aaKnown RBP13.95□□□□□ -0.18
TRAV4-201ENST00000390426 ABCC4O15439 1325 aa13.94□□□□□ -0.18
TRAV4-201ENST00000390426 GRIPAP1Q4V328 841 aa13.94□□□□□ -0.18
TRAV4-201ENST00000390426 GPC2Q8N158 579 aa13.94□□□□□ -0.18
TRAV4-201ENST00000390426 CFAP44Q96MT7 982 aa13.94□□□□□ -0.18
TRAV4-201ENST00000390426 TMX4Q9H1E5 349 aaPredicted RBP13.94□□□□□ -0.18
TRAV4-201ENST00000390426 CREBZFQ9NS37 354 aa13.94□□□□□ -0.18
TRAV4-201ENST00000390426 MKRN1Q9UHC7 482 aaKnown RBP13.94□□□□□ -0.18
TRAV4-201ENST00000390426 APAF1O14727 1248 aa13.93□□□□□ -0.18
TRAV4-201ENST00000390426 DUSP27Q5VZP5 1158 aa13.93□□□□□ -0.18
TRAV4-201ENST00000390426 PLBD2Q8NHP8 589 aa13.93□□□□□ -0.18
TRAV4-201ENST00000390426 MBIPQ9NS73 344 aa13.93□□□□□ -0.18
TRAV4-201ENST00000390426 ATP6V0A2Q9Y487 856 aa13.93□□□□□ -0.18
TRAV4-201ENST00000390426 COL4A5P29400 1685 aa13.93□□□□□ -0.18
TRAV4-201ENST00000390426 SH3TC1Q8TE82 1336 aa13.92□□□□□ -0.18
TRAV4-201ENST00000390426 PPIP5K2O43314 1243 aa13.92□□□□□ -0.18
TRAV4-201ENST00000390426 ITGBL1O95965 494 aaPredicted RBP13.92□□□□□ -0.18
TRAV4-201ENST00000390426 HOXB7P09629 217 aa13.92□□□□□ -0.18
TRAV4-201ENST00000390426 AOC3Q16853 763 aa13.92□□□□□ -0.18
TRAV4-201ENST00000390426 COL13A1Q5TAT6 717 aaPredicted RBP13.92□□□□□ -0.18
TRAV4-201ENST00000390426 ANKRD13DQ6ZTN6 518 aa13.92□□□□□ -0.18
TRAV4-201ENST00000390426 DDX46Q7L014 1031 aaKnown RBP13.92□□□□□ -0.18
TRAV4-201ENST00000390426 NIM1KQ8IY84 436 aa13.92□□□□□ -0.18
TRAV4-201ENST00000390426 DBF4Q9UBU7 674 aaPredicted RBP13.92□□□□□ -0.18
TRAV4-201ENST00000390426 SCN4AP35499 1836 aa13.92□□□□□ -0.18
TRAV4-201ENST00000390426 PASKQ96RG2 1323 aa13.91□□□□□ -0.18
TRAV4-201ENST00000390426 ATP5J2-PTCD1G3V325 749 aa13.91□□□□□ -0.18
TRAV4-201ENST00000390426 ELL2O00472 640 aaPredicted RBP13.91□□□□□ -0.18
TRAV4-201ENST00000390426 BBOX1O75936 387 aa13.91□□□□□ -0.18
TRAV4-201ENST00000390426 ZNF853P0CG23 659 aa13.91□□□□□ -0.18
TRAV4-201ENST00000390426 HSPA1AP0DMV8 641 aaKnown RBP13.91□□□□□ -0.18
TRAV4-201ENST00000390426 HSPA1BP0DMV9 641 aaKnown RBP13.91□□□□□ -0.18
TRAV4-201ENST00000390426 MAP1SQ66K74 1059 aaPredicted RBP13.91□□□□□ -0.18
TRAV4-201ENST00000390426 PNMA8AQ86V59 439 aaPredicted RBP13.91□□□□□ -0.18
TRAV4-201ENST00000390426 POTEDQ86YR6 584 aa13.91□□□□□ -0.18
TRAV4-201ENST00000390426 SP8Q8IXZ3 490 aa13.91□□□□□ -0.18
TRAV4-201ENST00000390426 LMOD1P29536 600 aaPredicted RBP13.9□□□□□ -0.18
TRAV4-201ENST00000390426 EPS15P42566 896 aa13.9□□□□□ -0.18
TRAV4-201ENST00000390426 GRAPQ13588 217 aa13.9□□□□□ -0.18
TRAV4-201ENST00000390426 DPP8Q6V1X1 898 aaPredicted RBP13.9□□□□□ -0.18
TRAV4-201ENST00000390426 CNTROBQ8N137 903 aa13.9□□□□□ -0.18
TRAV4-201ENST00000390426 MPNDQ8N594 471 aa13.9□□□□□ -0.18
TRAV4-201ENST00000390426 GRAPLQ8TC17 118 aaPredicted RBP13.9□□□□□ -0.18
TRAV4-201ENST00000390426 FAM89AQ96GI7 184 aa13.9□□□□□ -0.18
TRAV4-201ENST00000390426 ISCA1Q9BUE6 129 aa13.9□□□□□ -0.18
TRAV4-201ENST00000390426 HYPKQ9NX55 129 aa13.9□□□□□ -0.18
TRAV4-201ENST00000390426 TMEM88BA6NKF7 163 aa13.89□□□□□ -0.19
TRAV4-201ENST00000390426 RTL5Q5HYW3 569 aaPredicted RBP13.89□□□□□ -0.19
TRAV4-201ENST00000390426 SUPT20HQ8NEM7 779 aa13.89□□□□□ -0.19
TRAV4-201ENST00000390426 RTFDC1Q9BY42 306 aaPredicted RBP13.89□□□□□ -0.19
TRAV4-201ENST00000390426 IFT57Q9NWB7 429 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms