RNA–Protein interactions for RNA: ENST00000384566.1

RNU6-140P-201, Transcript of RNA, U6 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU6-140P, Length 108 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-140P-201ENST00000384566 PLA2G4AP47712 749 aa4.6□□□□□ -1.67
RNU6-140P-201ENST00000384566 TNNI2P48788 182 aa4.6□□□□□ -1.67
RNU6-140P-201ENST00000384566 RNF144AP50876 292 aaPredicted RBP4.6□□□□□ -1.67
RNU6-140P-201ENST00000384566 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.6□□□□□ -1.67
RNU6-140P-201ENST00000384566 C4orf17Q53FE4 359 aa4.6□□□□□ -1.67
RNU6-140P-201ENST00000384566 USP48Q86UV5 1035 aa4.6□□□□□ -1.67
RNU6-140P-201ENST00000384566 SNIP1Q8TAD8 396 aaKnown RBP4.6□□□□□ -1.67
RNU6-140P-201ENST00000384566 CCDC74AQ96AQ1 378 aa4.6□□□□□ -1.67
RNU6-140P-201ENST00000384566 AIDAQ96BJ3 306 aa4.6□□□□□ -1.67
RNU6-140P-201ENST00000384566 SUSD3Q96L08 255 aa4.6□□□□□ -1.67
RNU6-140P-201ENST00000384566 DMGDHQ9UI17 866 aaKnown RBP4.6□□□□□ -1.67
RNU6-140P-201ENST00000384566 INPP5FQ9Y2H2 1132 aa4.6□□□□□ -1.67
RNU6-140P-201ENST00000384566 TNFRSF21O75509 655 aa4.59□□□□□ -1.67
RNU6-140P-201ENST00000384566 TATP17735 454 aaPredicted RBP4.59□□□□□ -1.67
RNU6-140P-201ENST00000384566 DNAJA1P31689 397 aaKnown RBP4.59□□□□□ -1.67
RNU6-140P-201ENST00000384566 GTF2F1P35269 517 aaKnown RBP eCLIP4.59□□□□□ -1.67
RNU6-140P-201ENST00000384566 IDH3AP50213 366 aa4.59□□□□□ -1.67
RNU6-140P-201ENST00000384566 ARSDP51689 593 aa4.59□□□□□ -1.67
RNU6-140P-201ENST00000384566 RACK1P63244 317 aaKnown RBP4.59□□□□□ -1.67
RNU6-140P-201ENST00000384566 ARID5AQ03989 594 aa4.59□□□□□ -1.67
RNU6-140P-201ENST00000384566 TAF1CQ15572 869 aaPredicted RBP4.59□□□□□ -1.67
RNU6-140P-201ENST00000384566 PDE12Q6L8Q7 609 aaKnown RBP4.59□□□□□ -1.67
RNU6-140P-201ENST00000384566 NBPF10Q6P3W6 841 aaKnown RBP4.59□□□□□ -1.67
RNU6-140P-201ENST00000384566 NOP9Q86U38 636 aaKnown RBP4.59□□□□□ -1.67
RNU6-140P-201ENST00000384566 ZNF598Q86UK7 904 aaKnown RBP4.59□□□□□ -1.67
RNU6-140P-201ENST00000384566 VPS37DQ86XT2 251 aa4.59□□□□□ -1.67
RNU6-140P-201ENST00000384566 SNX29Q8TEQ0 813 aa4.59□□□□□ -1.67
RNU6-140P-201ENST00000384566 DNAJC2Q99543 621 aaKnown RBP4.59□□□□□ -1.67
RNU6-140P-201ENST00000384566 OSBPL7Q9BZF2 842 aa4.59□□□□□ -1.67
RNU6-140P-201ENST00000384566 LNPKQ9C0E8 428 aa4.59□□□□□ -1.67
RNU6-140P-201ENST00000384566 SRCIN1Q9C0H9 1055 aa4.59□□□□□ -1.67
RNU6-140P-201ENST00000384566 ZFAND3Q9H8U3 227 aa4.59□□□□□ -1.67
RNU6-140P-201ENST00000384566 ZFYVE28Q9HCC9 887 aa4.59□□□□□ -1.67
RNU6-140P-201ENST00000384566 FAM8A1Q9UBU6 413 aa4.59□□□□□ -1.67
RNU6-140P-201ENST00000384566 SPATA31C2B4DYI2 1134 aa4.58□□□□□ -1.68
RNU6-140P-201ENST00000384566 TIMP2P16035 220 aa4.58□□□□□ -1.68
RNU6-140P-201ENST00000384566 CDK11BP21127 795 aaKnown RBP4.58□□□□□ -1.68
RNU6-140P-201ENST00000384566 ST13P50502 369 aaKnown RBP4.58□□□□□ -1.68
RNU6-140P-201ENST00000384566 RBL2Q08999 1139 aa4.58□□□□□ -1.68
RNU6-140P-201ENST00000384566 FOXC1Q12948 553 aa4.58□□□□□ -1.68
RNU6-140P-201ENST00000384566 ZNF394Q53GI3 561 aa4.58□□□□□ -1.68
RNU6-140P-201ENST00000384566 ZNF697Q5TEC3 545 aa4.58□□□□□ -1.68
RNU6-140P-201ENST00000384566 SOGA3Q5TF21 947 aa4.58□□□□□ -1.68
RNU6-140P-201ENST00000384566 USPL1Q5W0Q7 1092 aa4.58□□□□□ -1.68
RNU6-140P-201ENST00000384566 GIMAP6Q6P9H5 292 aa4.58□□□□□ -1.68
RNU6-140P-201ENST00000384566 ZNF438Q7Z4V0 828 aa4.58□□□□□ -1.68
RNU6-140P-201ENST00000384566 MEIOBQ8N635 442 aa4.58□□□□□ -1.68
RNU6-140P-201ENST00000384566 EPS8L3Q8TE67 593 aaKnown RBP4.58□□□□□ -1.68
RNU6-140P-201ENST00000384566 DHX38Q92620 1227 aaKnown RBP4.58□□□□□ -1.68
RNU6-140P-201ENST00000384566 TSEN34Q9BSV6 310 aaKnown RBP4.58□□□□□ -1.68
RNU6-140P-201ENST00000384566 SRA1Q9HD15 236 aaKnown RBP4.58□□□□□ -1.68
RNU6-140P-201ENST00000384566 NEUROD4Q9HD90 331 aa4.58□□□□□ -1.68
RNU6-140P-201ENST00000384566 GGT7Q9UJ14 662 aa4.58□□□□□ -1.68
RNU6-140P-201ENST00000384566 FOXD3Q9UJU5 478 aaPredicted RBP4.58□□□□□ -1.68
RNU6-140P-201ENST00000384566 CDK11AQ9UQ88 783 aaPredicted RBP4.58□□□□□ -1.68
RNU6-140P-201ENST00000384566 TTC24A2A3L6 582 aaPredicted RBP4.57□□□□□ -1.68
RNU6-140P-201ENST00000384566 UBAP1LF5GYI3 381 aa4.57□□□□□ -1.68
RNU6-140P-201ENST00000384566 PHACTR2O75167 634 aa4.57□□□□□ -1.68
RNU6-140P-201ENST00000384566 INPP5BP32019 993 aa4.57□□□□□ -1.68
RNU6-140P-201ENST00000384566 WDR44Q5JSH3 913 aa4.57□□□□□ -1.68
RNU6-140P-201ENST00000384566 PI16Q6UXB8 463 aa4.57□□□□□ -1.68
RNU6-140P-201ENST00000384566 BICDL1Q6ZP65 573 aa4.57□□□□□ -1.68
RNU6-140P-201ENST00000384566 CMTR1Q8N1G2 835 aaKnown RBP4.57□□□□□ -1.68
RNU6-140P-201ENST00000384566 ZNF280CQ8ND82 737 aa4.57□□□□□ -1.68
RNU6-140P-201ENST00000384566 RNF166Q96A37 237 aaPredicted RBP4.57□□□□□ -1.68
RNU6-140P-201ENST00000384566 HSH2DQ96JZ2 352 aa4.57□□□□□ -1.68
RNU6-140P-201ENST00000384566 HIRIP3Q9BW71 556 aaPredicted RBP4.57□□□□□ -1.68
RNU6-140P-201ENST00000384566 ELP3Q9H9T3 547 aa4.57□□□□□ -1.68
RNU6-140P-201ENST00000384566 PKD2L1Q9P0L9 805 aa4.57□□□□□ -1.68
RNU6-140P-201ENST00000384566 RTCBQ9Y3I0 505 aaKnown RBP4.57□□□□□ -1.68
RNU6-140P-201ENST00000384566 PCDHGB7Q9Y5F8 929 aa4.57□□□□□ -1.68
RNU6-140P-201ENST00000384566 J3QL48 77 aa4.56□□□□□ -1.68
RNU6-140P-201ENST00000384566 SPINT1O43278 529 aa4.56□□□□□ -1.68
RNU6-140P-201ENST00000384566 USP17L7P0C7H9 530 aa4.56□□□□□ -1.68
RNU6-140P-201ENST00000384566 EPB42P16452 691 aa4.56□□□□□ -1.68
RNU6-140P-201ENST00000384566 NCLP19338 710 aaKnown RBP4.56□□□□□ -1.68
RNU6-140P-201ENST00000384566 IRS1P35568 1242 aa4.56□□□□□ -1.68
RNU6-140P-201ENST00000384566 PHKA2P46019 1235 aa4.56□□□□□ -1.68
RNU6-140P-201ENST00000384566 TRIP4Q15650 581 aaPredicted RBP4.56□□□□□ -1.68
RNU6-140P-201ENST00000384566 MEI1Q5TIA1 1274 aa4.56□□□□□ -1.68
RNU6-140P-201ENST00000384566 BTLAQ7Z6A9 289 aa4.56□□□□□ -1.68
RNU6-140P-201ENST00000384566 GALNT12Q8IXK2 581 aa4.56□□□□□ -1.68
RNU6-140P-201ENST00000384566 CYP4X1Q8N118 509 aa4.56□□□□□ -1.68
RNU6-140P-201ENST00000384566 PMEPA1Q969W9 287 aa4.56□□□□□ -1.68
RNU6-140P-201ENST00000384566 INSM2Q96T92 566 aaPredicted RBP4.56□□□□□ -1.68
RNU6-140P-201ENST00000384566 POLMQ9NP87 494 aaPredicted RBP4.56□□□□□ -1.68
RNU6-140P-201ENST00000384566 C11orf16Q9NQ32 467 aa4.56□□□□□ -1.68
RNU6-140P-201ENST00000384566 USP20Q9Y2K6 914 aa4.56□□□□□ -1.68
RNU6-140P-201ENST00000384566 KCNMB2Q9Y691 235 aa4.56□□□□□ -1.68
RNU6-140P-201ENST00000384566 GJA8P48165 433 aa4.55□□□□□ -1.68
RNU6-140P-201ENST00000384566 CCDC144BQ3MJ40 725 aa4.55□□□□□ -1.68
RNU6-140P-201ENST00000384566 IFFO2Q5TF58 517 aa4.55□□□□□ -1.68
RNU6-140P-201ENST00000384566 NXPE4Q6UWF7 544 aa4.55□□□□□ -1.68
RNU6-140P-201ENST00000384566 KLRG1Q96E93 195 aa4.55□□□□□ -1.68
RNU6-140P-201ENST00000384566 ZIC5Q96T25 663 aa4.55□□□□□ -1.68
RNU6-140P-201ENST00000384566 BCO2Q9BYV7 579 aa4.55□□□□□ -1.68
RNU6-140P-201ENST00000384566 NPHS2Q9NP85 383 aa4.55□□□□□ -1.68
RNU6-140P-201ENST00000384566 PPP4R2Q9NY27 417 aa4.55□□□□□ -1.68
RNU6-140P-201ENST00000384566 TMEM63CQ9P1W3 806 aa4.55□□□□□ -1.68
RNU6-140P-201ENST00000384566 TMA7Q9Y2S6 64 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms