RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 TUBB8Q3ZCM7 444 aa14.2□□□□□ -0.14
SRGAP3-202ENST00000383836 BUB1BO60566 1050 aaPredicted RBP14.2□□□□□ -0.14
SRGAP3-202ENST00000383836 ARFGAP2Q8N6H7 521 aa14.2□□□□□ -0.14
SRGAP3-202ENST00000383836 SEC63Q9UGP8 760 aaKnown RBP14.2□□□□□ -0.14
SRGAP3-202ENST00000383836 SSRP1Q08945 709 aaKnown RBP14.19□□□□□ -0.14
SRGAP3-202ENST00000383836 RAB3GAP1Q15042 981 aa14.19□□□□□ -0.14
SRGAP3-202ENST00000383836 RRAGDQ9NQL2 400 aaPredicted RBP14.19□□□□□ -0.14
SRGAP3-202ENST00000383836 PHACTR2O75167 634 aa14.19□□□□□ -0.14
SRGAP3-202ENST00000383836 LMNTD2Q8IXW0 634 aa14.19□□□□□ -0.14
SRGAP3-202ENST00000383836 MAP2K2P36507 400 aa14.19□□□□□ -0.14
SRGAP3-202ENST00000383836 HMGXB3Q12766 1538 aa14.19□□□□□ -0.14
SRGAP3-202ENST00000383836 ISM2Q6H9L7 571 aa14.19□□□□□ -0.14
SRGAP3-202ENST00000383836 IFT74Q96LB3 600 aa14.19□□□□□ -0.14
SRGAP3-202ENST00000383836 PLVAPQ9BX97 442 aa14.19□□□□□ -0.14
SRGAP3-202ENST00000383836 N4BP3O15049 544 aa14.19□□□□□ -0.14
SRGAP3-202ENST00000383836 AIDAQ96BJ3 306 aa14.19□□□□□ -0.14
SRGAP3-202ENST00000383836 PAXIP1Q6ZW49 1069 aaPredicted RBP14.19□□□□□ -0.14
SRGAP3-202ENST00000383836 INPP5BP32019 993 aa14.18□□□□□ -0.14
SRGAP3-202ENST00000383836 FAM177BA6PVY3 158 aa14.18□□□□□ -0.14
SRGAP3-202ENST00000383836 GOLGA8BA8MQT2 603 aa14.18□□□□□ -0.14
SRGAP3-202ENST00000383836 ZNF76P36508 570 aa14.18□□□□□ -0.14
SRGAP3-202ENST00000383836 AMPD3Q01432 767 aa14.18□□□□□ -0.14
SRGAP3-202ENST00000383836 MYCBPQ99417 103 aaPredicted RBP14.18□□□□□ -0.14
SRGAP3-202ENST00000383836 PTGS1P23219 599 aa14.18□□□□□ -0.14
SRGAP3-202ENST00000383836 TMPOP42166 694 aaKnown RBP14.18□□□□□ -0.14
SRGAP3-202ENST00000383836 DAPK1P53355 1430 aa14.18□□□□□ -0.14
SRGAP3-202ENST00000383836 U2AF2P26368 475 aaKnown RBP eCLIP14.18□□□□□ -0.14
SRGAP3-202ENST00000383836 IQCGQ9H095 443 aaKnown RBP14.18□□□□□ -0.14
SRGAP3-202ENST00000383836 RPGRIP1LQ68CZ1 1315 aa14.18□□□□□ -0.14
SRGAP3-202ENST00000383836 ZBTB16Q05516 673 aa14.18□□□□□ -0.14
SRGAP3-202ENST00000383836 PTPN23Q9H3S7 1636 aa14.18□□□□□ -0.14
SRGAP3-202ENST00000383836 SYKP43405 635 aa14.18□□□□□ -0.14
SRGAP3-202ENST00000383836 TYRO3Q06418 890 aa14.18□□□□□ -0.14
SRGAP3-202ENST00000383836 GBP1P32455 592 aa14.17□□□□□ -0.14
SRGAP3-202ENST00000383836 TMEM266Q2M3C6 531 aa14.17□□□□□ -0.14
SRGAP3-202ENST00000383836 PIBF1Q8WXW3 757 aa14.17□□□□□ -0.14
SRGAP3-202ENST00000383836 TMX3Q96JJ7 454 aa14.17□□□□□ -0.14
SRGAP3-202ENST00000383836 CETN1Q12798 172 aa14.17□□□□□ -0.14
SRGAP3-202ENST00000383836 SSH1Q8WYL5 1049 aa14.17□□□□□ -0.14
SRGAP3-202ENST00000383836 LUC7L2Q9Y383 392 aaKnown RBP14.17□□□□□ -0.14
SRGAP3-202ENST00000383836 SLC12A7Q9Y666 1083 aa14.17□□□□□ -0.14
SRGAP3-202ENST00000383836 MYO1BO43795 1136 aa14.17□□□□□ -0.14
SRGAP3-202ENST00000383836 SULT6B1Q6IMI4 303 aa14.17□□□□□ -0.14
SRGAP3-202ENST00000383836 SELENOSQ9BQE4 189 aa14.17□□□□□ -0.14
SRGAP3-202ENST00000383836 KRT86O43790 486 aa14.17□□□□□ -0.14
SRGAP3-202ENST00000383836 FCHSD2O94868 740 aa14.17□□□□□ -0.14
SRGAP3-202ENST00000383836 SETDB1Q15047 1291 aa14.17□□□□□ -0.14
SRGAP3-202ENST00000383836 TACC1O75410 805 aa14.17□□□□□ -0.14
SRGAP3-202ENST00000383836 VAV2P52735 878 aa14.17□□□□□ -0.14
SRGAP3-202ENST00000383836 CCDC141Q6ZP82 1450 aa14.17□□□□□ -0.14
SRGAP3-202ENST00000383836 FMNL3Q8IVF7 1028 aa14.17□□□□□ -0.14
SRGAP3-202ENST00000383836 AOPEPQ8N6M6 819 aa14.17□□□□□ -0.14
SRGAP3-202ENST00000383836 RMND1Q9NWS8 449 aa14.17□□□□□ -0.14
SRGAP3-202ENST00000383836 FEZ2Q9UHY8 353 aaPredicted RBP14.17□□□□□ -0.14
SRGAP3-202ENST00000383836 ABCC11Q96J66 1382 aa14.16□□□□□ -0.14
SRGAP3-202ENST00000383836 PCK1P35558 622 aa14.16□□□□□ -0.14
SRGAP3-202ENST00000383836 ARHGAP25P42331 645 aa14.16□□□□□ -0.14
SRGAP3-202ENST00000383836 MKRN1Q9UHC7 482 aaKnown RBP14.16□□□□□ -0.14
SRGAP3-202ENST00000383836 ARID4AP29374 1257 aaPredicted RBP14.16□□□□□ -0.14
SRGAP3-202ENST00000383836 PPM1FP49593 454 aaPredicted RBP14.16□□□□□ -0.14
SRGAP3-202ENST00000383836 KRT83P78385 493 aa14.16□□□□□ -0.14
SRGAP3-202ENST00000383836 STMN2Q93045 179 aa14.16□□□□□ -0.14
SRGAP3-202ENST00000383836 AKR1B10O60218 316 aa14.16□□□□□ -0.14
SRGAP3-202ENST00000383836 KCNG4Q8TDN1 519 aa14.16□□□□□ -0.14
SRGAP3-202ENST00000383836 DNAI2Q9GZS0 605 aa14.16□□□□□ -0.14
SRGAP3-202ENST00000383836 RHOXF2BP0C7M4 288 aa14.16□□□□□ -0.14
SRGAP3-202ENST00000383836 CCT2P78371 535 aaKnown RBP14.16□□□□□ -0.14
SRGAP3-202ENST00000383836 SYT10Q6XYQ8 523 aa14.16□□□□□ -0.14
SRGAP3-202ENST00000383836 PPFIBP2Q8ND30 876 aa14.16□□□□□ -0.14
SRGAP3-202ENST00000383836 RHOXF2Q9BQY4 288 aa14.16□□□□□ -0.14
SRGAP3-202ENST00000383836 PPP1R1BQ9UD71 204 aaPredicted RBP14.16□□□□□ -0.14
SRGAP3-202ENST00000383836 TSNARE1Q96NA8 513 aa14.16□□□□□ -0.14
SRGAP3-202ENST00000383836 CCDC77Q9BR77 488 aa14.16□□□□□ -0.14
SRGAP3-202ENST00000383836 A0A087WZG4 1122 aa14.16□□□□□ -0.14
SRGAP3-202ENST00000383836 TTC22Q5TAA0 569 aa14.16□□□□□ -0.14
SRGAP3-202ENST00000383836 CACNA2D3Q8IZS8 1091 aa14.16□□□□□ -0.14
SRGAP3-202ENST00000383836 MAP3K9P80192 1104 aa14.15□□□□□ -0.14
SRGAP3-202ENST00000383836 DNAJC25Q9H1X3 360 aa14.15□□□□□ -0.14
SRGAP3-202ENST00000383836 NESP48681 1621 aa14.15□□□□□ -0.14
SRGAP3-202ENST00000383836 TRIM7Q9C029 511 aa14.15□□□□□ -0.14
SRGAP3-202ENST00000383836 HMG20BQ9P0W2 317 aa14.15□□□□□ -0.14
SRGAP3-202ENST00000383836 CEP126Q9P2H0 1117 aa14.15□□□□□ -0.14
SRGAP3-202ENST00000383836 CCDC172P0C7W6 258 aa14.15□□□□□ -0.14
SRGAP3-202ENST00000383836 PPP2R3AQ06190 1150 aa14.15□□□□□ -0.14
SRGAP3-202ENST00000383836 NFE2L2Q16236 605 aa14.15□□□□□ -0.14
SRGAP3-202ENST00000383836 UBA5Q9GZZ9 404 aa14.15□□□□□ -0.14
SRGAP3-202ENST00000383836 AQRO60306 1485 aaKnown RBP eCLIP14.15□□□□□ -0.14
SRGAP3-202ENST00000383836 CCDC97Q96F63 343 aaPredicted RBP14.15□□□□□ -0.14
SRGAP3-202ENST00000383836 CWC25Q9NXE8 425 aaPredicted RBP14.15□□□□□ -0.14
SRGAP3-202ENST00000383836 PRPHP41219 470 aa14.14□□□□□ -0.15
SRGAP3-202ENST00000383836 CCDC40Q4G0X9 1142 aa14.14□□□□□ -0.15
SRGAP3-202ENST00000383836 TMEM132EQ6IEE7 984 aa14.14□□□□□ -0.15
SRGAP3-202ENST00000383836 MPHOSPH8Q99549 860 aa14.14□□□□□ -0.15
SRGAP3-202ENST00000383836 LARP6Q9BRS8 491 aaKnown RBP14.14□□□□□ -0.15
SRGAP3-202ENST00000383836 EVCP57679 992 aa14.14□□□□□ -0.15
SRGAP3-202ENST00000383836 ARHGAP5Q13017 1502 aa14.14□□□□□ -0.15
SRGAP3-202ENST00000383836 KIF1BO60333 1816 aa14.14□□□□□ -0.15
SRGAP3-202ENST00000383836 RIOK3O14730 519 aaKnown RBP14.14□□□□□ -0.15
SRGAP3-202ENST00000383836 EVI5LQ96CN4 794 aa14.14□□□□□ -0.15
SRGAP3-202ENST00000383836 PUS7Q96PZ0 661 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms