RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 ANAPC15P60006 121 aa10.77□□□□□ -0.69
GPNMB-202ENST00000381990 NEXNQ0ZGT2 675 aa10.77□□□□□ -0.69
GPNMB-202ENST00000381990 TSPY26PQ9H489 355 aa10.77□□□□□ -0.69
GPNMB-202ENST00000381990 HMGN5P82970 282 aaKnown RBP10.76□□□□□ -0.69
GPNMB-202ENST00000381990 CUL4AQ13619 759 aa10.76□□□□□ -0.69
GPNMB-202ENST00000381990 UVSSAQ2YD98 709 aa10.76□□□□□ -0.69
GPNMB-202ENST00000381990 PRIMPOLQ96LW4 560 aa10.76□□□□□ -0.69
GPNMB-202ENST00000381990 KCPQ6ZWJ8 1503 aa10.76□□□□□ -0.69
GPNMB-202ENST00000381990 DISP2A7MBM2 1401 aa10.76□□□□□ -0.69
GPNMB-202ENST00000381990 TNS2Q63HR2 1409 aa10.76□□□□□ -0.69
GPNMB-202ENST00000381990 SURF6O75683 361 aaKnown RBP10.76□□□□□ -0.69
GPNMB-202ENST00000381990 MCCP23508 829 aa10.76□□□□□ -0.69
GPNMB-202ENST00000381990 HSP90AB4PQ58FF6 505 aa10.76□□□□□ -0.69
GPNMB-202ENST00000381990 ANKRD13DQ6ZTN6 518 aa10.76□□□□□ -0.69
GPNMB-202ENST00000381990 METTL22Q9BUU2 404 aaPredicted RBP10.76□□□□□ -0.69
GPNMB-202ENST00000381990 PHLPP1O60346 1717 aa10.75□□□□□ -0.69
GPNMB-202ENST00000381990 TOGARAM1Q9Y4F4 1720 aa10.75□□□□□ -0.69
GPNMB-202ENST00000381990 IGKV5-2P06315 115 aa10.75□□□□□ -0.69
GPNMB-202ENST00000381990 IL17RAQ96F46 866 aa10.75□□□□□ -0.69
GPNMB-202ENST00000381990 TMX3Q96JJ7 454 aa10.75□□□□□ -0.69
GPNMB-202ENST00000381990 PLCH1Q4KWH8 1693 aa10.75□□□□□ -0.69
GPNMB-202ENST00000381990 NEURL1BA8MQ27 555 aa10.75□□□□□ -0.69
GPNMB-202ENST00000381990 EPB41L2O43491 1005 aaKnown RBP10.75□□□□□ -0.69
GPNMB-202ENST00000381990 MX1P20591 662 aa10.75□□□□□ -0.69
GPNMB-202ENST00000381990 STAP2Q9UGK3 403 aa10.75□□□□□ -0.69
GPNMB-202ENST00000381990 PTMAP06454 111 aaKnown RBP10.74□□□□□ -0.69
GPNMB-202ENST00000381990 KIF1BPQ96EK5 621 aa10.74□□□□□ -0.69
GPNMB-202ENST00000381990 TMOD3Q9NYL9 352 aa10.74□□□□□ -0.69
GPNMB-202ENST00000381990 PRDM4Q9UKN5 801 aa10.74□□□□□ -0.69
GPNMB-202ENST00000381990 NEK4P51957 841 aa10.74□□□□□ -0.69
GPNMB-202ENST00000381990 MYRIPQ8NFW9 859 aa10.74□□□□□ -0.69
GPNMB-202ENST00000381990 MYD88Q99836 296 aa10.74□□□□□ -0.69
GPNMB-202ENST00000381990 AOX1Q06278 1338 aa10.73□□□□□ -0.69
GPNMB-202ENST00000381990 PIP4K2AP48426 406 aaPredicted RBP10.73□□□□□ -0.69
GPNMB-202ENST00000381990 GCKRQ14397 625 aa10.73□□□□□ -0.69
GPNMB-202ENST00000381990 PLBD2Q8NHP8 589 aa10.73□□□□□ -0.69
GPNMB-202ENST00000381990 RHPN1Q8TCX5 695 aa10.73□□□□□ -0.69
GPNMB-202ENST00000381990 ARFGEF2Q9Y6D5 1785 aa10.73□□□□□ -0.69
GPNMB-202ENST00000381990 PTCD1O75127 700 aaKnown RBP10.73□□□□□ -0.69
GPNMB-202ENST00000381990 LETM1O95202 739 aaPredicted RBP10.73□□□□□ -0.69
GPNMB-202ENST00000381990 GTF2F1P35269 517 aaKnown RBP eCLIP10.73□□□□□ -0.69
GPNMB-202ENST00000381990 SUCLG2Q96I99 432 aa10.73□□□□□ -0.69
GPNMB-202ENST00000381990 TUBGCP6Q96RT7 1819 aa10.73□□□□□ -0.69
GPNMB-202ENST00000381990 NBPF26B4DH59 902 aa10.72□□□□□ -0.69
GPNMB-202ENST00000381990 NBPF14Q5TI25 921 aa10.72□□□□□ -0.69
GPNMB-202ENST00000381990 NBPF10Q6P3W6 841 aaKnown RBP10.72□□□□□ -0.69
GPNMB-202ENST00000381990 NBPF15Q8N660 670 aa10.72□□□□□ -0.69
GPNMB-202ENST00000381990 PIBF1Q8WXW3 757 aa10.72□□□□□ -0.69
GPNMB-202ENST00000381990 CCDC94Q9BW85 323 aaPredicted RBP10.72□□□□□ -0.69
GPNMB-202ENST00000381990 IL1RAPL2Q9NP60 686 aa10.72□□□□□ -0.69
GPNMB-202ENST00000381990 NSFL1CQ9UNZ2 370 aaKnown RBP10.72□□□□□ -0.69
GPNMB-202ENST00000381990 WNK3Q9BYP7 1800 aa10.72□□□□□ -0.69
GPNMB-202ENST00000381990 KAZALD1Q96I82 304 aa10.72□□□□□ -0.69
GPNMB-202ENST00000381990 WDR33Q9C0J8 1336 aaKnown RBP10.72□□□□□ -0.69
GPNMB-202ENST00000381990 ITGB4P16144 1822 aa10.71□□□□□ -0.69
GPNMB-202ENST00000381990 AFDNP55196 1824 aaKnown RBP10.71□□□□□ -0.69
GPNMB-202ENST00000381990 TOM1O60784 492 aa10.71□□□□□ -0.69
GPNMB-202ENST00000381990 TMEM87AQ8NBN3 555 aa10.71□□□□□ -0.69
GPNMB-202ENST00000381990 RNF214Q8ND24 703 aa10.71□□□□□ -0.69
GPNMB-202ENST00000381990 BICC1Q9H694 974 aaKnown RBP10.71□□□□□ -0.69
GPNMB-202ENST00000381990 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.71□□□□□ -0.69
GPNMB-202ENST00000381990 LRP6O75581 1613 aa10.71□□□□□ -0.69
GPNMB-202ENST00000381990 EXOC5O00471 708 aa10.71□□□□□ -0.69
GPNMB-202ENST00000381990 OS9Q13438 667 aaPredicted RBP10.71□□□□□ -0.69
GPNMB-202ENST00000381990 ERC1Q8IUD2 1116 aa10.71□□□□□ -0.69
GPNMB-202ENST00000381990 CDCA7Q9BWT1 371 aaPredicted RBP10.71□□□□□ -0.69
GPNMB-202ENST00000381990 COL15A1P39059 1388 aa10.71□□□□□ -0.7
GPNMB-202ENST00000381990 PIGBQ92521 554 aa10.71□□□□□ -0.7
GPNMB-202ENST00000381990 ESYT1Q9BSJ8 1104 aa10.71□□□□□ -0.7
GPNMB-202ENST00000381990 TEX13AQ9BXU3 409 aaPredicted RBP10.71□□□□□ -0.7
GPNMB-202ENST00000381990 NRAPQ86VF7 1730 aa10.7□□□□□ -0.7
GPNMB-202ENST00000381990 ADAMTS2O95450 1211 aa10.7□□□□□ -0.7
GPNMB-202ENST00000381990 A1BGP04217 495 aa10.7□□□□□ -0.7
GPNMB-202ENST00000381990 UTP14CQ5TAP6 766 aaKnown RBP10.7□□□□□ -0.7
GPNMB-202ENST00000381990 TSHZ3Q63HK5 1081 aa10.7□□□□□ -0.7
GPNMB-202ENST00000381990 DNTTIP2Q5QJE6 756 aaKnown RBP10.7□□□□□ -0.7
GPNMB-202ENST00000381990 NUTM1Q86Y26 1132 aa10.7□□□□□ -0.7
GPNMB-202ENST00000381990 THRAP3Q9Y2W1 955 aaKnown RBP10.7□□□□□ -0.7
GPNMB-202ENST00000381990 NUP188Q5SRE5 1749 aa10.69□□□□□ -0.7
GPNMB-202ENST00000381990 CCDC183Q5T5S1 534 aa10.69□□□□□ -0.7
GPNMB-202ENST00000381990 TTLL7Q6ZT98 887 aa10.69□□□□□ -0.7
GPNMB-202ENST00000381990 ASAP1Q9ULH1 1129 aa10.69□□□□□ -0.7
GPNMB-202ENST00000381990 BCL9O00512 1426 aa10.69□□□□□ -0.7
GPNMB-202ENST00000381990 NOLC1Q14978 699 aaKnown RBP eCLIP10.69□□□□□ -0.7
GPNMB-202ENST00000381990 CLASRPQ8N2M8 674 aaKnown RBP10.69□□□□□ -0.7
GPNMB-202ENST00000381990 ATG3Q9NT62 314 aa10.69□□□□□ -0.7
GPNMB-202ENST00000381990 SPTLC3Q9NUV7 552 aa10.69□□□□□ -0.7
GPNMB-202ENST00000381990 PA2G4Q9UQ80 394 aaKnown RBP10.69□□□□□ -0.7
GPNMB-202ENST00000381990 SPATA31A1Q5TZJ5 1347 aa10.69□□□□□ -0.7
GPNMB-202ENST00000381990 USP42Q9H9J4 1324 aaKnown RBP10.69□□□□□ -0.7
GPNMB-202ENST00000381990 ATP5J2-PTCD1G3V325 749 aa10.68□□□□□ -0.7
GPNMB-202ENST00000381990 PIP4K2BP78356 416 aa10.68□□□□□ -0.7
GPNMB-202ENST00000381990 A0A087WZG4 1122 aa10.68□□□□□ -0.7
GPNMB-202ENST00000381990 TRIM6-TRIM34B2RNG4 842 aa10.68□□□□□ -0.7
GPNMB-202ENST00000381990 TPM3P06753 285 aa10.68□□□□□ -0.7
GPNMB-202ENST00000381990 G3BP1Q13283 466 aaKnown RBP eCLIP10.68□□□□□ -0.7
GPNMB-202ENST00000381990 UBE3BQ7Z3V4 1068 aa10.68□□□□□ -0.7
GPNMB-202ENST00000381990 KAT6BQ8WYB5 2073 aa10.68□□□□□ -0.7
GPNMB-202ENST00000381990 NWD2Q9ULI1 1742 aa10.68□□□□□ -0.7
GPNMB-202ENST00000381990 STARD3NLO95772 234 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms