RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 IBTKQ9P2D0 1353 aaPredicted RBP18.53■□□□□ 0.56
SHOX-202ENST00000381575 TCERG1O14776 1098 aaKnown RBP18.53■□□□□ 0.56
SHOX-202ENST00000381575 POTEIP0CG38 1075 aa18.53■□□□□ 0.56
SHOX-202ENST00000381575 POTEJP0CG39 1038 aa18.53■□□□□ 0.56
SHOX-202ENST00000381575 RPGRQ92834 1020 aaKnown RBP18.53■□□□□ 0.56
SHOX-202ENST00000381575 ZNF541Q9H0D2 1346 aa18.52■□□□□ 0.56
SHOX-202ENST00000381575 CHL1O00533 1208 aa18.52■□□□□ 0.55
SHOX-202ENST00000381575 ALDH1B1P30837 517 aa18.52■□□□□ 0.55
SHOX-202ENST00000381575 XAGE3Q8WTP9 111 aa18.52■□□□□ 0.55
SHOX-202ENST00000381575 BABAM1Q9NWV8 329 aa18.52■□□□□ 0.55
SHOX-202ENST00000381575 SCN4AP35499 1836 aa18.51■□□□□ 0.55
SHOX-202ENST00000381575 RIC1Q4ADV7 1423 aa18.51■□□□□ 0.55
SHOX-202ENST00000381575 SNED1Q8TER0 1413 aa18.51■□□□□ 0.55
SHOX-202ENST00000381575 COPS6Q7L5N1 327 aa18.51■□□□□ 0.55
SHOX-202ENST00000381575 SYNE4Q8N205 404 aa18.51■□□□□ 0.55
SHOX-202ENST00000381575 COL4A5P29400 1685 aa18.51■□□□□ 0.55
SHOX-202ENST00000381575 RTKN2Q8IZC4 609 aa18.5■□□□□ 0.55
SHOX-202ENST00000381575 CHPF2Q9P2E5 772 aa18.5■□□□□ 0.55
SHOX-202ENST00000381575 IARSP41252 1262 aaKnown RBP18.49■□□□□ 0.55
SHOX-202ENST00000381575 PPP1R42Q7Z4L9 355 aa18.49■□□□□ 0.55
SHOX-202ENST00000381575 KLRG1Q96E93 195 aa18.49■□□□□ 0.55
SHOX-202ENST00000381575 PARP10Q53GL7 1025 aa18.48■□□□□ 0.55
SHOX-202ENST00000381575 UTP14AQ9BVJ6 771 aaKnown RBP18.48■□□□□ 0.55
SHOX-202ENST00000381575 PPEF1O14829 653 aaPredicted RBP18.47■□□□□ 0.55
SHOX-202ENST00000381575 HOXA10P31260 410 aaPredicted RBP18.47■□□□□ 0.55
SHOX-202ENST00000381575 HDGFL1Q5TGJ6 251 aa18.47■□□□□ 0.55
SHOX-202ENST00000381575 RBM17Q96I25 401 aaKnown RBP18.47■□□□□ 0.55
SHOX-202ENST00000381575 DDX21Q9NR30 783 aaKnown RBP eCLIP18.47■□□□□ 0.55
SHOX-202ENST00000381575 DDX60Q8IY21 1712 aaKnown RBP18.46■□□□□ 0.55
SHOX-202ENST00000381575 APAF1O14727 1248 aa18.46■□□□□ 0.55
SHOX-202ENST00000381575 HCLS1P14317 486 aaPredicted RBP18.46■□□□□ 0.55
SHOX-202ENST00000381575 NLRP10Q86W26 655 aa18.45■□□□□ 0.54
SHOX-202ENST00000381575 PSMD1Q99460 953 aa18.45■□□□□ 0.54
SHOX-202ENST00000381575 MBIPQ9NS73 344 aa18.45■□□□□ 0.54
SHOX-202ENST00000381575 ABCC4O15439 1325 aa18.44■□□□□ 0.54
SHOX-202ENST00000381575 EAPPQ56P03 285 aaPredicted RBP18.44■□□□□ 0.54
SHOX-202ENST00000381575 RNF123Q5XPI4 1314 aa18.44■□□□□ 0.54
SHOX-202ENST00000381575 CHADLQ6NUI6 762 aa18.44■□□□□ 0.54
SHOX-202ENST00000381575 L3MBTL3Q96JM7 780 aaPredicted RBP18.44■□□□□ 0.54
SHOX-202ENST00000381575 NLRP3Q96P20 1036 aa18.44■□□□□ 0.54
SHOX-202ENST00000381575 CRAMP1Q96RY5 1269 aa18.44■□□□□ 0.54
SHOX-202ENST00000381575 TAF1DQ9H5J8 278 aaPredicted RBP18.44■□□□□ 0.54
SHOX-202ENST00000381575 TCIRG1Q13488 830 aa18.43■□□□□ 0.54
SHOX-202ENST00000381575 CCDC184Q52MB2 194 aa18.43■□□□□ 0.54
SHOX-202ENST00000381575 DUSP27Q5VZP5 1158 aa18.43■□□□□ 0.54
SHOX-202ENST00000381575 CFAP44Q96MT7 982 aa18.43■□□□□ 0.54
SHOX-202ENST00000381575 TRMT112Q9UI30 125 aaKnown RBP18.43■□□□□ 0.54
SHOX-202ENST00000381575 LTBP1Q14766 1721 aa18.43■□□□□ 0.54
SHOX-202ENST00000381575 IQCA1LA6NCM1 817 aa18.42■□□□□ 0.54
SHOX-202ENST00000381575 FZD9O00144 591 aa18.42■□□□□ 0.54
SHOX-202ENST00000381575 HSP90AB3PQ58FF7 597 aa18.42■□□□□ 0.54
SHOX-202ENST00000381575 GJA3Q9Y6H8 435 aa18.42■□□□□ 0.54
SHOX-202ENST00000381575 ADAMTSL1Q8N6G6 1762 aa18.42■□□□□ 0.54
SHOX-202ENST00000381575 ATP5J2-PTCD1G3V325 749 aa18.42■□□□□ 0.54
SHOX-202ENST00000381575 ELL2O00472 640 aaPredicted RBP18.42■□□□□ 0.54
SHOX-202ENST00000381575 SLC10A5Q5PT55 438 aa18.42■□□□□ 0.54
SHOX-202ENST00000381575 CC2D2BQ6DHV5 1058 aa18.42■□□□□ 0.54
SHOX-202ENST00000381575 LARGE2Q8N3Y3 721 aa18.42■□□□□ 0.54
SHOX-202ENST00000381575 JMYQ8N9B5 988 aa18.42■□□□□ 0.54
SHOX-202ENST00000381575 JDP2Q8WYK2 163 aa18.42■□□□□ 0.54
SHOX-202ENST00000381575 IFFO2Q5TF58 517 aa18.41■□□□□ 0.54
SHOX-202ENST00000381575 HACL1Q9UJ83 578 aa18.41■□□□□ 0.54
SHOX-202ENST00000381575 COL4A1P02462 1669 aa18.4■□□□□ 0.54
SHOX-202ENST00000381575 SH3TC1Q8TE82 1336 aa18.4■□□□□ 0.54
SHOX-202ENST00000381575 HOXB7P09629 217 aa18.4■□□□□ 0.54
SHOX-202ENST00000381575 ZNF853P0CG23 659 aa18.4■□□□□ 0.54
SHOX-202ENST00000381575 EPHX2P34913 555 aa18.4■□□□□ 0.54
SHOX-202ENST00000381575 AOC3Q16853 763 aa18.4■□□□□ 0.54
SHOX-202ENST00000381575 RTL5Q5HYW3 569 aaPredicted RBP18.4■□□□□ 0.54
SHOX-202ENST00000381575 LDHDQ86WU2 507 aa18.4■□□□□ 0.54
SHOX-202ENST00000381575 PLBD2Q8NHP8 589 aa18.4■□□□□ 0.54
SHOX-202ENST00000381575 DBF4Q9UBU7 674 aaPredicted RBP18.4■□□□□ 0.54
SHOX-202ENST00000381575 PPIP5K2O43314 1243 aa18.39■□□□□ 0.53
SHOX-202ENST00000381575 ANKRD13DQ6ZTN6 518 aa18.39■□□□□ 0.53
SHOX-202ENST00000381575 CLEC11AQ9Y240 323 aa18.39■□□□□ 0.53
SHOX-202ENST00000381575 ATP6V0A2Q9Y487 856 aa18.39■□□□□ 0.53
SHOX-202ENST00000381575 EIF6P56537 245 aaKnown RBP18.38■□□□□ 0.53
SHOX-202ENST00000381575 GPC2Q8N158 579 aa18.38■□□□□ 0.53
SHOX-202ENST00000381575 FAM89AQ96GI7 184 aa18.38■□□□□ 0.53
SHOX-202ENST00000381575 IFT57Q9NWB7 429 aa18.38■□□□□ 0.53
SHOX-202ENST00000381575 NIM1KQ8IY84 436 aa18.37■□□□□ 0.53
SHOX-202ENST00000381575 ISCA1Q9BUE6 129 aa18.37■□□□□ 0.53
SHOX-202ENST00000381575 PHAXQ9H814 394 aaKnown RBP18.37■□□□□ 0.53
SHOX-202ENST00000381575 HYPKQ9NX55 129 aa18.37■□□□□ 0.53
SHOX-202ENST00000381575 MKRN1Q9UHC7 482 aaKnown RBP18.37■□□□□ 0.53
SHOX-202ENST00000381575 LRRC37AA6NMS7 1700 aa18.37■□□□□ 0.53
SHOX-202ENST00000381575 GNAI1P63096 354 aa18.36■□□□□ 0.53
SHOX-202ENST00000381575 MAP1SQ66K74 1059 aaPredicted RBP18.36■□□□□ 0.53
SHOX-202ENST00000381575 DDX46Q7L014 1031 aaKnown RBP18.36■□□□□ 0.53
SHOX-202ENST00000381575 C8orf58Q8NAV2 365 aa18.36■□□□□ 0.53
SHOX-202ENST00000381575 TMX4Q9H1E5 349 aaPredicted RBP18.36■□□□□ 0.53
SHOX-202ENST00000381575 PASKQ96RG2 1323 aa18.35■□□□□ 0.53
SHOX-202ENST00000381575 DUOX1Q9NRD9 1551 aa18.35■□□□□ 0.53
SHOX-202ENST00000381575 CREBZFQ9NS37 354 aa18.35■□□□□ 0.53
SHOX-202ENST00000381575 EPS15P42566 896 aa18.34■□□□□ 0.53
SHOX-202ENST00000381575 SCNN1DP51172 638 aa18.34■□□□□ 0.53
SHOX-202ENST00000381575 GRAPQ13588 217 aa18.34■□□□□ 0.53
SHOX-202ENST00000381575 GRIPAP1Q4V328 841 aa18.34■□□□□ 0.53
SHOX-202ENST00000381575 DPP8Q6V1X1 898 aaPredicted RBP18.34■□□□□ 0.53
SHOX-202ENST00000381575 GRAPLQ8TC17 118 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms