RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 PSMD1Q99460 953 aa30.42■■■□□ 2.46
U2AF1-202ENST00000380276 PASKQ96RG2 1323 aa30.42■■■□□ 2.46
U2AF1-202ENST00000380276 FZD9O00144 591 aa30.41■■■□□ 2.46
U2AF1-202ENST00000380276 EIF6P56537 245 aaKnown RBP30.41■■■□□ 2.46
U2AF1-202ENST00000380276 RBM17Q96I25 401 aaKnown RBP30.41■■■□□ 2.46
U2AF1-202ENST00000380276 CC2D2BQ6DHV5 1058 aa30.4■■■□□ 2.46
U2AF1-202ENST00000380276 CNTNAP1P78357 1384 aa30.4■■■□□ 2.46
U2AF1-202ENST00000380276 IBTKQ9P2D0 1353 aaPredicted RBP30.4■■■□□ 2.46
U2AF1-202ENST00000380276 TMEM88BA6NKF7 163 aa30.39■■■□□ 2.46
U2AF1-202ENST00000380276 GIGYF2Q6Y7W6 1299 aaKnown RBP30.39■■■□□ 2.46
U2AF1-202ENST00000380276 PPP1R42Q7Z4L9 355 aa30.39■■■□□ 2.46
U2AF1-202ENST00000380276 PNMA8AQ86V59 439 aaPredicted RBP30.39■■■□□ 2.46
U2AF1-202ENST00000380276 GPC2Q8N158 579 aa30.39■■■□□ 2.46
U2AF1-202ENST00000380276 ERBB4Q15303 1308 aa30.39■■■□□ 2.46
U2AF1-202ENST00000380276 PCNTO95613 3336 aa30.39■■■□□ 2.45
U2AF1-202ENST00000380276 PPEF1O14829 653 aaPredicted RBP30.38■■■□□ 2.45
U2AF1-202ENST00000380276 RIPK4P57078 832 aa30.38■■■□□ 2.45
U2AF1-202ENST00000380276 LARGE2Q8N3Y3 721 aa30.38■■■□□ 2.45
U2AF1-202ENST00000380276 NTSR2O95665 410 aa30.37■■■□□ 2.45
U2AF1-202ENST00000380276 MAP1SQ66K74 1059 aaPredicted RBP30.37■■■□□ 2.45
U2AF1-202ENST00000380276 ZNF34Q8IZ26 560 aa30.37■■■□□ 2.45
U2AF1-202ENST00000380276 TMX4Q9H1E5 349 aaPredicted RBP30.37■■■□□ 2.45
U2AF1-202ENST00000380276 RIC1Q4ADV7 1423 aa30.37■■■□□ 2.45
U2AF1-202ENST00000380276 LMOD1P29536 600 aaPredicted RBP30.36■■■□□ 2.45
U2AF1-202ENST00000380276 HOXA10P31260 410 aaPredicted RBP30.36■■■□□ 2.45
U2AF1-202ENST00000380276 SNED1Q8TER0 1413 aa30.36■■■□□ 2.45
U2AF1-202ENST00000380276 ITGBL1O95965 494 aaPredicted RBP30.35■■■□□ 2.45
U2AF1-202ENST00000380276 PARP10Q53GL7 1025 aa30.35■■■□□ 2.45
U2AF1-202ENST00000380276 SLC51AQ86UW1 340 aa30.35■■■□□ 2.45
U2AF1-202ENST00000380276 NLRP3Q96P20 1036 aa30.35■■■□□ 2.45
U2AF1-202ENST00000380276 CRAMP1Q96RY5 1269 aa30.35■■■□□ 2.45
U2AF1-202ENST00000380276 ANXA1P04083 346 aa30.34■■■□□ 2.45
U2AF1-202ENST00000380276 C3orf67Q6ZVT6 689 aa30.34■■■□□ 2.45
U2AF1-202ENST00000380276 CNTROBQ8N137 903 aa30.34■■■□□ 2.45
U2AF1-202ENST00000380276 NECTIN2Q92692 538 aa30.34■■■□□ 2.45
U2AF1-202ENST00000380276 GRIPAP1Q4V328 841 aa30.33■■■□□ 2.45
U2AF1-202ENST00000380276 AIDAQ96BJ3 306 aa30.33■■■□□ 2.45
U2AF1-202ENST00000380276 ADAMTSL1Q8N6G6 1762 aa30.33■■■□□ 2.45
U2AF1-202ENST00000380276 COL4A5P29400 1685 aa30.33■■■□□ 2.45
U2AF1-202ENST00000380276 NIM1KQ8IY84 436 aa30.32■■■□□ 2.44
U2AF1-202ENST00000380276 UTP14AQ9BVJ6 771 aaKnown RBP30.32■■■□□ 2.44
U2AF1-202ENST00000380276 FOXN1O15353 648 aa30.31■■■□□ 2.44
U2AF1-202ENST00000380276 VEGFBP49765 207 aa30.31■■■□□ 2.44
U2AF1-202ENST00000380276 LMOD3Q0VAK6 560 aa30.31■■■□□ 2.44
U2AF1-202ENST00000380276 AIMP1Q12904 312 aaKnown RBP30.31■■■□□ 2.44
U2AF1-202ENST00000380276 PPIP5K2O43314 1243 aa30.3■■■□□ 2.44
U2AF1-202ENST00000380276 PROSER3Q2NL68 480 aa30.3■■■□□ 2.44
U2AF1-202ENST00000380276 PDIA6Q15084 440 aa30.29■■■□□ 2.44
U2AF1-202ENST00000380276 NEUROD2Q15784 382 aa30.29■■■□□ 2.44
U2AF1-202ENST00000380276 ABT1Q9ULW3 272 aaKnown RBP30.29■■■□□ 2.44
U2AF1-202ENST00000380276 TMPOP42166 694 aaKnown RBP30.28■■■□□ 2.44
U2AF1-202ENST00000380276 RALBP1Q15311 655 aa30.27■■■□□ 2.44
U2AF1-202ENST00000380276 AOC3Q16853 763 aa30.27■■■□□ 2.44
U2AF1-202ENST00000380276 LAS1LQ9Y4W2 734 aaKnown RBP30.27■■■□□ 2.44
U2AF1-202ENST00000380276 EPS15P42566 896 aa30.26■■■□□ 2.43
U2AF1-202ENST00000380276 LTBP1Q14766 1721 aa30.26■■■□□ 2.43
U2AF1-202ENST00000380276 DEFB115Q30KQ5 88 aa30.26■■■□□ 2.43
U2AF1-202ENST00000380276 COPS6Q7L5N1 327 aa30.26■■■□□ 2.43
U2AF1-202ENST00000380276 LRP10Q7Z4F1 713 aa30.26■■■□□ 2.43
U2AF1-202ENST00000380276 CCDC146Q8IYE0 955 aa30.26■■■□□ 2.43
U2AF1-202ENST00000380276 ABCC4O15439 1325 aa30.25■■■□□ 2.43
U2AF1-202ENST00000380276 HSP90AB3PQ58FF7 597 aa30.25■■■□□ 2.43
U2AF1-202ENST00000380276 XAGE3Q8WTP9 111 aa30.25■■■□□ 2.43
U2AF1-202ENST00000380276 BABAM1Q9NWV8 329 aa30.25■■■□□ 2.43
U2AF1-202ENST00000380276 SCNN1DP51172 638 aa30.24■■■□□ 2.43
U2AF1-202ENST00000380276 ATP6V0A2Q9Y487 856 aa30.24■■■□□ 2.43
U2AF1-202ENST00000380276 ANKRD36CQ5JPF3 1778 aa30.23■■■□□ 2.43
U2AF1-202ENST00000380276 HCLS1P14317 486 aaPredicted RBP30.23■■■□□ 2.43
U2AF1-202ENST00000380276 PAXIP1Q6ZW49 1069 aaPredicted RBP30.23■■■□□ 2.43
U2AF1-202ENST00000380276 CTCFP49711 727 aaPredicted RBP30.22■■■□□ 2.43
U2AF1-202ENST00000380276 SLC10A5Q5PT55 438 aa30.22■■■□□ 2.43
U2AF1-202ENST00000380276 SUPT20HQ8NEM7 779 aa30.22■■■□□ 2.43
U2AF1-202ENST00000380276 ZNF428Q96B54 188 aa30.22■■■□□ 2.43
U2AF1-202ENST00000380276 DDX21Q9NR30 783 aaKnown RBP eCLIP30.22■■■□□ 2.43
U2AF1-202ENST00000380276 DPP8Q6V1X1 898 aaPredicted RBP30.21■■■□□ 2.43
U2AF1-202ENST00000380276 NLRP10Q86W26 655 aa30.21■■■□□ 2.43
U2AF1-202ENST00000380276 TRMT112Q9UI30 125 aaKnown RBP30.21■■■□□ 2.43
U2AF1-202ENST00000380276 RASSF10A6NK89 507 aa30.2■■■□□ 2.43
U2AF1-202ENST00000380276 LAMB2P55268 1798 aa30.19■■■□□ 2.42
U2AF1-202ENST00000380276 FMR1Q06787 632 aaKnown RBP eCLIP30.19■■■□□ 2.42
U2AF1-202ENST00000380276 GRM1Q13255 1194 aa30.19■■■□□ 2.42
U2AF1-202ENST00000380276 KRT24Q2M2I5 525 aa30.19■■■□□ 2.42
U2AF1-202ENST00000380276 USP50Q70EL3 339 aaPredicted RBP30.19■■■□□ 2.42
U2AF1-202ENST00000380276 DDX46Q7L014 1031 aaKnown RBP30.19■■■□□ 2.42
U2AF1-202ENST00000380276 WDR43Q15061 677 aaKnown RBP eCLIP30.18■■■□□ 2.42
U2AF1-202ENST00000380276 MPNDQ8N594 471 aa30.18■■■□□ 2.42
U2AF1-202ENST00000380276 PRDM10Q9NQV6 1147 aa30.18■■■□□ 2.42
U2AF1-202ENST00000380276 WDR33Q9C0J8 1336 aaKnown RBP30.18■■■□□ 2.42
U2AF1-202ENST00000380276 BBOX1O75936 387 aa30.17■■■□□ 2.42
U2AF1-202ENST00000380276 TCIRG1Q13488 830 aa30.17■■■□□ 2.42
U2AF1-202ENST00000380276 VPS33BQ9H267 617 aa30.17■■■□□ 2.42
U2AF1-202ENST00000380276 ZNRF3Q9ULT6 936 aa30.17■■■□□ 2.42
U2AF1-202ENST00000380276 SH3TC1Q8TE82 1336 aa30.17■■■□□ 2.42
U2AF1-202ENST00000380276 MYBBP1AQ9BQG0 1328 aaKnown RBP30.17■■■□□ 2.42
U2AF1-202ENST00000380276 SP8Q8IXZ3 490 aa30.16■■■□□ 2.42
U2AF1-202ENST00000380276 WBP1LQ9NX94 342 aa30.16■■■□□ 2.42
U2AF1-202ENST00000380276 CHPF2Q9P2E5 772 aa30.16■■■□□ 2.42
U2AF1-202ENST00000380276 TRAF5O00463 557 aa30.15■■■□□ 2.42
U2AF1-202ENST00000380276 LBX1P52954 281 aa30.15■■■□□ 2.42
U2AF1-202ENST00000380276 DDX10Q13206 875 aaKnown RBP30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms