RNA–Protein interactions for RNA: ENST00000379160.3

PCNA-202, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNA, Length 1,359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-202ENST00000379160 NUTM1Q86Y26 1132 aa18.08■□□□□ 0.49
PCNA-202ENST00000379160 ZBTB3Q9H5J0 574 aa18.08■□□□□ 0.49
PCNA-202ENST00000379160 MAP3K15Q6ZN16 1313 aa18.08■□□□□ 0.48
PCNA-202ENST00000379160 RIPK4P57078 832 aa18.07■□□□□ 0.48
PCNA-202ENST00000379160 PLCD3Q8N3E9 789 aa18.07■□□□□ 0.48
PCNA-202ENST00000379160 TSPYL4Q9UJ04 414 aa18.07■□□□□ 0.48
PCNA-202ENST00000379160 GPTP24298 496 aa18.06■□□□□ 0.48
PCNA-202ENST00000379160 ALDH1B1P30837 517 aa18.06■□□□□ 0.48
PCNA-202ENST00000379160 RALBP1Q15311 655 aa18.06■□□□□ 0.48
PCNA-202ENST00000379160 NYXQ9GZU5 481 aa18.06■□□□□ 0.48
PCNA-202ENST00000379160 ZNF277Q9NRM2 450 aaPredicted RBP18.06■□□□□ 0.48
PCNA-202ENST00000379160 ABCC12Q96J65 1359 aa18.06■□□□□ 0.48
PCNA-202ENST00000379160 FKBP4Q02790 459 aaKnown RBP eCLIP18.05■□□□□ 0.48
PCNA-202ENST00000379160 MIER1Q8N108 512 aa18.05■□□□□ 0.48
PCNA-202ENST00000379160 JMYQ8N9B5 988 aa18.05■□□□□ 0.48
PCNA-202ENST00000379160 RTKN2Q8IZC4 609 aa18.04■□□□□ 0.48
PCNA-202ENST00000379160 UBN2Q6ZU65 1347 aa18.04■□□□□ 0.48
PCNA-202ENST00000379160 POTEIP0CG38 1075 aa18.04■□□□□ 0.48
PCNA-202ENST00000379160 POTEJP0CG39 1038 aa18.04■□□□□ 0.48
PCNA-202ENST00000379160 EIF2S2P20042 333 aaKnown RBP18.04■□□□□ 0.48
PCNA-202ENST00000379160 DDX10Q13206 875 aaKnown RBP18.04■□□□□ 0.48
PCNA-202ENST00000379160 SUSD4Q5VX71 490 aa18.04■□□□□ 0.48
PCNA-202ENST00000379160 CRY2Q49AN0 593 aa18.03■□□□□ 0.48
PCNA-202ENST00000379160 CHADLQ6NUI6 762 aa18.03■□□□□ 0.48
PCNA-202ENST00000379160 TMPOP42166 694 aaKnown RBP18.02■□□□□ 0.47
PCNA-202ENST00000379160 NEUROD2Q15784 382 aa18.02■□□□□ 0.47
PCNA-202ENST00000379160 CCDC146Q8IYE0 955 aa18.02■□□□□ 0.47
PCNA-202ENST00000379160 ZNF34Q8IZ26 560 aa18.02■□□□□ 0.47
PCNA-202ENST00000379160 SYNE4Q8N205 404 aa18.02■□□□□ 0.47
PCNA-202ENST00000379160 RPGRQ92834 1020 aaKnown RBP18.02■□□□□ 0.47
PCNA-202ENST00000379160 ERBB4Q15303 1308 aa18.02■□□□□ 0.47
PCNA-202ENST00000379160 ZNF541Q9H0D2 1346 aa18.02■□□□□ 0.47
PCNA-202ENST00000379160 IQCA1LA6NCM1 817 aa18.01■□□□□ 0.47
PCNA-202ENST00000379160 ANXA1P04083 346 aa18.01■□□□□ 0.47
PCNA-202ENST00000379160 IARSP41252 1262 aaKnown RBP18.01■□□□□ 0.47
PCNA-202ENST00000379160 GIGYF2Q6Y7W6 1299 aaKnown RBP18.01■□□□□ 0.47
PCNA-202ENST00000379160 SCN4AP35499 1836 aa18■□□□□ 0.47
PCNA-202ENST00000379160 LMOD3Q0VAK6 560 aa18■□□□□ 0.47
PCNA-202ENST00000379160 PDIA6Q15084 440 aa18■□□□□ 0.47
PCNA-202ENST00000379160 PROSER3Q2NL68 480 aa18■□□□□ 0.47
PCNA-202ENST00000379160 NECTIN2Q92692 538 aa18■□□□□ 0.47
PCNA-202ENST00000379160 L3MBTL3Q96JM7 780 aaPredicted RBP18■□□□□ 0.47
PCNA-202ENST00000379160 IBTKQ9P2D0 1353 aaPredicted RBP18■□□□□ 0.47
PCNA-202ENST00000379160 NTSR2O95665 410 aa17.99■□□□□ 0.47
PCNA-202ENST00000379160 LRP10Q7Z4F1 713 aa17.99■□□□□ 0.47
PCNA-202ENST00000379160 TAF1DQ9H5J8 278 aaPredicted RBP17.99■□□□□ 0.47
PCNA-202ENST00000379160 MYBBP1AQ9BQG0 1328 aaKnown RBP17.99■□□□□ 0.47
PCNA-202ENST00000379160 TCERG1O14776 1098 aaKnown RBP17.98■□□□□ 0.47
PCNA-202ENST00000379160 C3orf67Q6ZVT6 689 aa17.98■□□□□ 0.47
PCNA-202ENST00000379160 PPP1R42Q7Z4L9 355 aa17.98■□□□□ 0.47
PCNA-202ENST00000379160 RBM17Q96I25 401 aaKnown RBP17.98■□□□□ 0.47
PCNA-202ENST00000379160 PSMD1Q99460 953 aa17.98■□□□□ 0.47
PCNA-202ENST00000379160 BABAM1Q9NWV8 329 aa17.98■□□□□ 0.47
PCNA-202ENST00000379160 FZD9O00144 591 aa17.97■□□□□ 0.47
PCNA-202ENST00000379160 HOXA10P31260 410 aaPredicted RBP17.97■□□□□ 0.47
PCNA-202ENST00000379160 RIC1Q4ADV7 1423 aa17.97■□□□□ 0.47
PCNA-202ENST00000379160 EAPPQ56P03 285 aaPredicted RBP17.97■□□□□ 0.47
PCNA-202ENST00000379160 SLC51AQ86UW1 340 aa17.97■□□□□ 0.47
PCNA-202ENST00000379160 LDHDQ86WU2 507 aa17.97■□□□□ 0.47
PCNA-202ENST00000379160 SNED1Q8TER0 1413 aa17.97■□□□□ 0.47
PCNA-202ENST00000379160 LAS1LQ9Y4W2 734 aaKnown RBP17.97■□□□□ 0.47
PCNA-202ENST00000379160 RNF123Q5XPI4 1314 aa17.96■□□□□ 0.47
PCNA-202ENST00000379160 AIMP1Q12904 312 aaKnown RBP17.96■□□□□ 0.47
PCNA-202ENST00000379160 PARP10Q53GL7 1025 aa17.96■□□□□ 0.47
PCNA-202ENST00000379160 COL13A1Q5TAT6 717 aaPredicted RBP17.96■□□□□ 0.47
PCNA-202ENST00000379160 CC2D2BQ6DHV5 1058 aa17.96■□□□□ 0.47
PCNA-202ENST00000379160 PIP4P2Q8N4L2 257 aa17.96■□□□□ 0.47
PCNA-202ENST00000379160 JDP2Q8WYK2 163 aa17.96■□□□□ 0.47
PCNA-202ENST00000379160 HACL1Q9UJ83 578 aa17.96■□□□□ 0.47
PCNA-202ENST00000379160 PPEF1O14829 653 aaPredicted RBP17.95■□□□□ 0.46
PCNA-202ENST00000379160 WDR43Q15061 677 aaKnown RBP eCLIP17.95■□□□□ 0.46
PCNA-202ENST00000379160 KRT24Q2M2I5 525 aa17.95■□□□□ 0.46
PCNA-202ENST00000379160 COPS6Q7L5N1 327 aa17.95■□□□□ 0.46
PCNA-202ENST00000379160 NLRP3Q96P20 1036 aa17.95■□□□□ 0.46
PCNA-202ENST00000379160 CRAMP1Q96RY5 1269 aa17.95■□□□□ 0.46
PCNA-202ENST00000379160 UTP14AQ9BVJ6 771 aaKnown RBP17.95■□□□□ 0.46
PCNA-202ENST00000379160 CREBZFQ9NS37 354 aa17.95■□□□□ 0.46
PCNA-202ENST00000379160 EPHX2P34913 555 aa17.94■□□□□ 0.46
PCNA-202ENST00000379160 XAGE3Q8WTP9 111 aa17.94■□□□□ 0.46
PCNA-202ENST00000379160 RUNDC1Q96C34 613 aa17.94■□□□□ 0.46
PCNA-202ENST00000379160 MKRN1Q9UHC7 482 aaKnown RBP17.94■□□□□ 0.46
PCNA-202ENST00000379160 COL4A5P29400 1685 aa17.94■□□□□ 0.46
PCNA-202ENST00000379160 CHL1O00533 1208 aa17.93■□□□□ 0.46
PCNA-202ENST00000379160 PRKAR2AP13861 404 aaKnown RBP17.93■□□□□ 0.46
PCNA-202ENST00000379160 GPC2Q8N158 579 aa17.93■□□□□ 0.46
PCNA-202ENST00000379160 TRIM35Q9UPQ4 493 aa17.93■□□□□ 0.46
PCNA-202ENST00000379160 GJA3Q9Y6H8 435 aa17.93■□□□□ 0.46
PCNA-202ENST00000379160 ANKRD36CQ5JPF3 1778 aa17.93■□□□□ 0.46
PCNA-202ENST00000379160 PASKQ96RG2 1323 aa17.93■□□□□ 0.46
PCNA-202ENST00000379160 HSPA1AP0DMV8 641 aaKnown RBP17.92■□□□□ 0.46
PCNA-202ENST00000379160 HSPA1BP0DMV9 641 aaKnown RBP17.92■□□□□ 0.46
PCNA-202ENST00000379160 EIF6P56537 245 aaKnown RBP17.92■□□□□ 0.46
PCNA-202ENST00000379160 LARGE2Q8N3Y3 721 aa17.92■□□□□ 0.46
PCNA-202ENST00000379160 ZNF428Q96B54 188 aa17.92■□□□□ 0.46
PCNA-202ENST00000379160 ADAMTS8Q9UP79 889 aa17.92■□□□□ 0.46
PCNA-202ENST00000379160 GRIPAP1Q4V328 841 aa17.91■□□□□ 0.46
PCNA-202ENST00000379160 SLC10A5Q5PT55 438 aa17.91■□□□□ 0.46
PCNA-202ENST00000379160 ITGBL1O95965 494 aaPredicted RBP17.91■□□□□ 0.46
PCNA-202ENST00000379160 HCLS1P14317 486 aaPredicted RBP17.91■□□□□ 0.46
PCNA-202ENST00000379160 HSP90AB3PQ58FF7 597 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms