RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 SPA17Q15506 151 aa16.77■□□□□ 0.27
PRDM16-203ENST00000378391 PUS7Q96PZ0 661 aaKnown RBP16.77■□□□□ 0.27
PRDM16-203ENST00000378391 ATP10AO60312 1499 aa16.77■□□□□ 0.27
PRDM16-203ENST00000378391 CD2BP2O95400 341 aaKnown RBP16.76■□□□□ 0.27
PRDM16-203ENST00000378391 PPP4R3BQ5MIZ7 849 aa16.76■□□□□ 0.27
PRDM16-203ENST00000378391 PHAXQ9H814 394 aaKnown RBP16.76■□□□□ 0.27
PRDM16-203ENST00000378391 E9PCH4 1651 aa16.76■□□□□ 0.27
PRDM16-203ENST00000378391 HCLS1P14317 486 aaPredicted RBP16.76■□□□□ 0.27
PRDM16-203ENST00000378391 NOLC1Q14978 699 aaKnown RBP eCLIP16.76■□□□□ 0.27
PRDM16-203ENST00000378391 STX1AQ16623 288 aa16.76■□□□□ 0.27
PRDM16-203ENST00000378391 DDX54Q8TDD1 881 aaKnown RBP16.76■□□□□ 0.27
PRDM16-203ENST00000378391 IFIT1P09914 478 aaKnown RBP16.76■□□□□ 0.27
PRDM16-203ENST00000378391 GJB2P29033 226 aa16.76■□□□□ 0.27
PRDM16-203ENST00000378391 USP48Q86UV5 1035 aa16.76■□□□□ 0.27
PRDM16-203ENST00000378391 ERBB4Q15303 1308 aa16.76■□□□□ 0.27
PRDM16-203ENST00000378391 SSBP05455 408 aaKnown RBP eCLIP16.75■□□□□ 0.27
PRDM16-203ENST00000378391 ANKRD18AQ8IVF6 992 aa16.75■□□□□ 0.27
PRDM16-203ENST00000378391 FSIP1Q8NA03 581 aa16.75■□□□□ 0.27
PRDM16-203ENST00000378391 PHACTR3Q96KR7 559 aa16.75■□□□□ 0.27
PRDM16-203ENST00000378391 SLC26A8Q96RN1 970 aa16.75■□□□□ 0.27
PRDM16-203ENST00000378391 LARP6Q9BRS8 491 aaKnown RBP16.75■□□□□ 0.27
PRDM16-203ENST00000378391 STRN4Q9NRL3 753 aa16.75■□□□□ 0.27
PRDM16-203ENST00000378391 RAI14Q9P0K7 980 aa16.75■□□□□ 0.27
PRDM16-203ENST00000378391 SHTN1A0MZ66 631 aa16.75■□□□□ 0.27
PRDM16-203ENST00000378391 ZNF518AQ6AHZ1 1483 aa16.75■□□□□ 0.27
PRDM16-203ENST00000378391 GOLGA6L9A6NEM1 432 aa16.75■□□□□ 0.27
PRDM16-203ENST00000378391 PDE1AP54750 535 aa16.75■□□□□ 0.27
PRDM16-203ENST00000378391 FLIIQ13045 1269 aa16.75■□□□□ 0.27
PRDM16-203ENST00000378391 TAX1BP1Q86VP1 789 aa16.75■□□□□ 0.27
PRDM16-203ENST00000378391 MNAT1P51948 309 aa16.75■□□□□ 0.27
PRDM16-203ENST00000378391 TERF1P54274 439 aa16.75■□□□□ 0.27
PRDM16-203ENST00000378391 ATP2B2Q01814 1243 aa16.75■□□□□ 0.27
PRDM16-203ENST00000378391 PAXBP1Q9Y5B6 917 aa16.75■□□□□ 0.27
PRDM16-203ENST00000378391 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.75■□□□□ 0.27
PRDM16-203ENST00000378391 KLHL34Q8N239 644 aa16.75■□□□□ 0.27
PRDM16-203ENST00000378391 OTUD7AQ8TE49 926 aaPredicted RBP16.75■□□□□ 0.27
PRDM16-203ENST00000378391 TRMT1Q9NXH9 659 aaKnown RBP16.75■□□□□ 0.27
PRDM16-203ENST00000378391 CEP85Q6P2H3 762 aa16.74■□□□□ 0.27
PRDM16-203ENST00000378391 TFIP11Q9UBB9 837 aaKnown RBP16.74■□□□□ 0.27
PRDM16-203ENST00000378391 NF2P35240 595 aa16.74■□□□□ 0.27
PRDM16-203ENST00000378391 AMOTQ4VCS5 1084 aa16.74■□□□□ 0.27
PRDM16-203ENST00000378391 ESYT1Q9BSJ8 1104 aa16.74■□□□□ 0.27
PRDM16-203ENST00000378391 DBF4Q9UBU7 674 aaPredicted RBP16.74■□□□□ 0.27
PRDM16-203ENST00000378391 PREX2Q70Z35 1606 aa16.74■□□□□ 0.27
PRDM16-203ENST00000378391 IDI1Q13907 227 aa16.74■□□□□ 0.27
PRDM16-203ENST00000378391 METTL24Q5JXM2 366 aa16.74■□□□□ 0.27
PRDM16-203ENST00000378391 CCDC8Q9H0W5 538 aaPredicted RBP16.74■□□□□ 0.27
PRDM16-203ENST00000378391 POTEB2H3BUK9 544 aa16.73■□□□□ 0.27
PRDM16-203ENST00000378391 FKBP15Q5T1M5 1219 aa16.73■□□□□ 0.27
PRDM16-203ENST00000378391 KLHL10Q6JEL2 608 aa16.73■□□□□ 0.27
PRDM16-203ENST00000378391 CNNM3Q8NE01 707 aa16.73■□□□□ 0.27
PRDM16-203ENST00000378391 IQGAP3Q86VI3 1631 aa16.73■□□□□ 0.27
PRDM16-203ENST00000378391 TTC12Q9H892 705 aaPredicted RBP16.73■□□□□ 0.27
PRDM16-203ENST00000378391 TRPM2O94759 1503 aa16.73■□□□□ 0.27
PRDM16-203ENST00000378391 RAPGEF3O95398 923 aa16.72■□□□□ 0.27
PRDM16-203ENST00000378391 WDR66Q8TBY9 1149 aa16.72■□□□□ 0.27
PRDM16-203ENST00000378391 POLKQ9UBT6 870 aa16.72■□□□□ 0.27
PRDM16-203ENST00000378391 CNPY2Q9Y2B0 182 aa16.72■□□□□ 0.27
PRDM16-203ENST00000378391 LAMC1P11047 1609 aa16.72■□□□□ 0.27
PRDM16-203ENST00000378391 IGHMBP2P38935 993 aaKnown RBP16.72■□□□□ 0.27
PRDM16-203ENST00000378391 GUCY1B3Q02153 619 aa16.72■□□□□ 0.27
PRDM16-203ENST00000378391 SEPT6Q14141 434 aa16.72■□□□□ 0.27
PRDM16-203ENST00000378391 NAPBQ9H115 298 aa16.72■□□□□ 0.27
PRDM16-203ENST00000378391 HMG20BQ9P0W2 317 aa16.72■□□□□ 0.27
PRDM16-203ENST00000378391 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.72■□□□□ 0.27
PRDM16-203ENST00000378391 ZNF213O14771 459 aa16.71■□□□□ 0.27
PRDM16-203ENST00000378391 GSPT1P15170 499 aaKnown RBP16.71■□□□□ 0.27
PRDM16-203ENST00000378391 ANAPC15P60006 121 aa16.71■□□□□ 0.27
PRDM16-203ENST00000378391 BMS1Q14692 1282 aaKnown RBP16.71■□□□□ 0.27
PRDM16-203ENST00000378391 CCDC94Q9BW85 323 aaPredicted RBP16.71■□□□□ 0.27
PRDM16-203ENST00000378391 HYPKQ9NX55 129 aa16.71■□□□□ 0.27
PRDM16-203ENST00000378391 SPDYE4A6NLX3 237 aa16.71■□□□□ 0.27
PRDM16-203ENST00000378391 SNW1Q13573 536 aaKnown RBP16.71■□□□□ 0.27
PRDM16-203ENST00000378391 PKP1Q13835 747 aa16.71■□□□□ 0.27
PRDM16-203ENST00000378391 FAM107BQ9H098 131 aa16.71■□□□□ 0.27
PRDM16-203ENST00000378391 ZSCAN16Q9H4T2 348 aaPredicted RBP16.71■□□□□ 0.27
PRDM16-203ENST00000378391 BANK1Q8NDB2 785 aa16.71■□□□□ 0.27
PRDM16-203ENST00000378391 ZSCAN22P10073 491 aaPredicted RBP16.71■□□□□ 0.26
PRDM16-203ENST00000378391 PAFAH1B1P43034 410 aa16.71■□□□□ 0.26
PRDM16-203ENST00000378391 GIMAP6Q6P9H5 292 aa16.71■□□□□ 0.26
PRDM16-203ENST00000378391 TMEM132AQ24JP5 1023 aa16.7■□□□□ 0.26
PRDM16-203ENST00000378391 TMC6Q7Z403 805 aa16.7■□□□□ 0.26
PRDM16-203ENST00000378391 SPATA24Q86W54 205 aa16.7■□□□□ 0.26
PRDM16-203ENST00000378391 CCDC150Q8NCX0 1101 aa16.7■□□□□ 0.26
PRDM16-203ENST00000378391 TMEM63CQ9P1W3 806 aa16.7■□□□□ 0.26
PRDM16-203ENST00000378391 PPIP5K1Q6PFW1 1433 aa16.7■□□□□ 0.26
PRDM16-203ENST00000378391 USO1O60763 962 aaKnown RBP16.7■□□□□ 0.26
PRDM16-203ENST00000378391 YEATS4O95619 227 aa16.7■□□□□ 0.26
PRDM16-203ENST00000378391 PLEKHF1Q96S99 279 aa16.7■□□□□ 0.26
PRDM16-203ENST00000378391 MYD88Q99836 296 aa16.7■□□□□ 0.26
PRDM16-203ENST00000378391 PRDM11Q9NQV5 511 aa16.7■□□□□ 0.26
PRDM16-203ENST00000378391 UNC13BO14795 1591 aa16.7■□□□□ 0.26
PRDM16-203ENST00000378391 GOLIM4O00461 696 aa16.7■□□□□ 0.26
PRDM16-203ENST00000378391 STARD3NLO95772 234 aa16.7■□□□□ 0.26
PRDM16-203ENST00000378391 ZNF287Q9HBT7 754 aa16.7■□□□□ 0.26
PRDM16-203ENST00000378391 SBNO2Q9Y2G9 1366 aa16.7■□□□□ 0.26
PRDM16-203ENST00000378391 ZNF500O60304 480 aaPredicted RBP16.69■□□□□ 0.26
PRDM16-203ENST00000378391 SEPT11Q9NVA2 429 aaKnown RBP16.69■□□□□ 0.26
PRDM16-203ENST00000378391 ABCF2Q9UG63 623 aa16.69■□□□□ 0.26
PRDM16-203ENST00000378391 FGFR1OPO95684 399 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms