RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 CCDC66A2RUB6 948 aa16.23■□□□□ 0.19
TRIM13-202ENST00000378182 TSHZ3Q63HK5 1081 aa16.23■□□□□ 0.19
TRIM13-202ENST00000378182 PPM1EQ8WY54 764 aa16.23■□□□□ 0.19
TRIM13-202ENST00000378182 GSTO1P78417 241 aa16.23■□□□□ 0.19
TRIM13-202ENST00000378182 STXBP4Q6ZWJ1 553 aa16.23■□□□□ 0.19
TRIM13-202ENST00000378182 UBE3BQ7Z3V4 1068 aa16.22■□□□□ 0.19
TRIM13-202ENST00000378182 CCDC12Q8WUD4 166 aaPredicted RBP16.22■□□□□ 0.19
TRIM13-202ENST00000378182 BEGAINQ9BUH8 593 aa16.22■□□□□ 0.19
TRIM13-202ENST00000378182 UQCRHLA0A096LP55 91 aa16.22■□□□□ 0.19
TRIM13-202ENST00000378182 FCHSD2O94868 740 aa16.22■□□□□ 0.19
TRIM13-202ENST00000378182 LDHCP07864 332 aa16.22■□□□□ 0.19
TRIM13-202ENST00000378182 UQCRHP07919 91 aa16.22■□□□□ 0.19
TRIM13-202ENST00000378182 TRMT1Q9NXH9 659 aaKnown RBP16.22■□□□□ 0.19
TRIM13-202ENST00000378182 NBPF8Q3BBV2 869 aa16.22■□□□□ 0.19
TRIM13-202ENST00000378182 SPECC1Q5M775 1068 aa16.22■□□□□ 0.19
TRIM13-202ENST00000378182 NBPF14Q5TI25 921 aa16.22■□□□□ 0.19
TRIM13-202ENST00000378182 FBXO31Q5XUX0 539 aaPredicted RBP16.22■□□□□ 0.19
TRIM13-202ENST00000378182 ANKRD24Q8TF21 1146 aa16.22■□□□□ 0.19
TRIM13-202ENST00000378182 LRRC9Q6ZRR7 1453 aa16.22■□□□□ 0.19
TRIM13-202ENST00000378182 PRKG1Q13976 671 aa16.22■□□□□ 0.19
TRIM13-202ENST00000378182 ANXA1P04083 346 aa16.22■□□□□ 0.19
TRIM13-202ENST00000378182 CYP7A1P22680 504 aa16.22■□□□□ 0.19
TRIM13-202ENST00000378182 AMPD3Q01432 767 aa16.22■□□□□ 0.19
TRIM13-202ENST00000378182 IFIT1BQ5T764 474 aaKnown RBP16.22■□□□□ 0.19
TRIM13-202ENST00000378182 PKD2L1Q9P0L9 805 aa16.21■□□□□ 0.19
TRIM13-202ENST00000378182 TOM1O60784 492 aa16.21■□□□□ 0.19
TRIM13-202ENST00000378182 SUPT6HQ7KZ85 1726 aaKnown RBP16.21■□□□□ 0.19
TRIM13-202ENST00000378182 DNAAF4Q8WXU2 420 aa16.21■□□□□ 0.19
TRIM13-202ENST00000378182 ATAD2Q6PL18 1390 aa16.21■□□□□ 0.19
TRIM13-202ENST00000378182 USO1O60763 962 aaKnown RBP16.21■□□□□ 0.19
TRIM13-202ENST00000378182 TTF1Q15361 905 aaPredicted RBP16.21■□□□□ 0.19
TRIM13-202ENST00000378182 RNF187Q5TA31 235 aaPredicted RBP16.21■□□□□ 0.19
TRIM13-202ENST00000378182 JDP2Q8WYK2 163 aa16.21■□□□□ 0.19
TRIM13-202ENST00000378182 METAP2P50579 478 aaKnown RBP eCLIP16.21■□□□□ 0.18
TRIM13-202ENST00000378182 EXOC1Q9NV70 894 aa16.21■□□□□ 0.18
TRIM13-202ENST00000378182 SNAPC4Q5SXM2 1469 aa16.2■□□□□ 0.18
TRIM13-202ENST00000378182 TBC1D5Q92609 795 aa16.2■□□□□ 0.18
TRIM13-202ENST00000378182 NIP7Q9Y221 180 aaKnown RBP eCLIP16.2■□□□□ 0.18
TRIM13-202ENST00000378182 PDE3AQ14432 1141 aa16.2■□□□□ 0.18
TRIM13-202ENST00000378182 URI1O94763 535 aaPredicted RBP16.2■□□□□ 0.18
TRIM13-202ENST00000378182 EMILIN1Q9Y6C2 1016 aa16.2■□□□□ 0.18
TRIM13-202ENST00000378182 IKBKGQ9Y6K9 419 aa16.2■□□□□ 0.18
TRIM13-202ENST00000378182 ACTN2P35609 894 aa16.19■□□□□ 0.18
TRIM13-202ENST00000378182 SLC4A4Q9Y6R1 1079 aa16.19■□□□□ 0.18
TRIM13-202ENST00000378182 RAB3IL1Q8TBN0 382 aa16.19■□□□□ 0.18
TRIM13-202ENST00000378182 USP16Q9Y5T5 823 aa16.19■□□□□ 0.18
TRIM13-202ENST00000378182 SPOUT1Q5T280 376 aaKnown RBP16.19■□□□□ 0.18
TRIM13-202ENST00000378182 SMARCC2Q8TAQ2 1214 aa16.19■□□□□ 0.18
TRIM13-202ENST00000378182 LRRC45Q96CN5 670 aa16.19■□□□□ 0.18
TRIM13-202ENST00000378182 NOD1Q9Y239 953 aa16.19■□□□□ 0.18
TRIM13-202ENST00000378182 FSD2A1L4K1 749 aa16.19■□□□□ 0.18
TRIM13-202ENST00000378182 HSP90AA4PQ58FG1 418 aa16.19■□□□□ 0.18
TRIM13-202ENST00000378182 CABLES1Q8TDN4 633 aa16.19■□□□□ 0.18
TRIM13-202ENST00000378182 TAOK3Q9H2K8 898 aa16.19■□□□□ 0.18
TRIM13-202ENST00000378182 AFMP43652 599 aa16.19■□□□□ 0.18
TRIM13-202ENST00000378182 FSIP1Q8NA03 581 aa16.19■□□□□ 0.18
TRIM13-202ENST00000378182 TFIP11Q9UBB9 837 aaKnown RBP16.19■□□□□ 0.18
TRIM13-202ENST00000378182 ZBTB9Q96C00 473 aa16.18■□□□□ 0.18
TRIM13-202ENST00000378182 MSH6P52701 1360 aa16.18■□□□□ 0.18
TRIM13-202ENST00000378182 NESP48681 1621 aa16.18■□□□□ 0.18
TRIM13-202ENST00000378182 UBA7P41226 1012 aa16.18■□□□□ 0.18
TRIM13-202ENST00000378182 IFNL2Q8IZJ0 200 aa16.18■□□□□ 0.18
TRIM13-202ENST00000378182 GIMAP7Q8NHV1 300 aa16.18■□□□□ 0.18
TRIM13-202ENST00000378182 YEATS4O95619 227 aa16.18■□□□□ 0.18
TRIM13-202ENST00000378182 EAPPQ56P03 285 aaPredicted RBP16.18■□□□□ 0.18
TRIM13-202ENST00000378182 BRPF3Q9ULD4 1205 aa16.18■□□□□ 0.18
TRIM13-202ENST00000378182 IGF1RP08069 1367 aa16.18■□□□□ 0.18
TRIM13-202ENST00000378182 A0A1W2PRG0 241 aa16.18■□□□□ 0.18
TRIM13-202ENST00000378182 ARID5AQ03989 594 aa16.18■□□□□ 0.18
TRIM13-202ENST00000378182 NDC80O14777 642 aa16.17■□□□□ 0.18
TRIM13-202ENST00000378182 EEF2P13639 858 aaKnown RBP16.17■□□□□ 0.18
TRIM13-202ENST00000378182 PAFAH1B1P43034 410 aa16.17■□□□□ 0.18
TRIM13-202ENST00000378182 CCDC63Q8NA47 563 aa16.17■□□□□ 0.18
TRIM13-202ENST00000378182 ANO10Q9NW15 660 aa16.17■□□□□ 0.18
TRIM13-202ENST00000378182 HECW1Q76N89 1606 aa16.17■□□□□ 0.18
TRIM13-202ENST00000378182 RPGRIP1LQ68CZ1 1315 aa16.17■□□□□ 0.18
TRIM13-202ENST00000378182 IARSP41252 1262 aaKnown RBP16.17■□□□□ 0.18
TRIM13-202ENST00000378182 ZNF804AQ7Z570 1209 aa16.17■□□□□ 0.18
TRIM13-202ENST00000378182 GRPEL1Q9HAV7 217 aa16.17■□□□□ 0.18
TRIM13-202ENST00000378182 SAP30BPQ9UHR5 308 aaKnown RBP16.16■□□□□ 0.18
TRIM13-202ENST00000378182 ERICH3Q5RHP9 1530 aa16.16■□□□□ 0.18
TRIM13-202ENST00000378182 BIRC2Q13490 618 aa16.16■□□□□ 0.18
TRIM13-202ENST00000378182 GSTA5Q7RTV2 222 aa16.16■□□□□ 0.18
TRIM13-202ENST00000378182 MAATS1Q7Z4T9 603 aa16.16■□□□□ 0.18
TRIM13-202ENST00000378182 UBXN4Q92575 508 aa16.16■□□□□ 0.18
TRIM13-202ENST00000378182 LRRC2Q9BYS8 371 aa16.16■□□□□ 0.18
TRIM13-202ENST00000378182 HMGB1P09429 215 aaKnown RBP16.16■□□□□ 0.18
TRIM13-202ENST00000378182 HARSP12081 509 aaKnown RBP16.16■□□□□ 0.18
TRIM13-202ENST00000378182 SFPQP23246 707 aaKnown RBP eCLIP16.16■□□□□ 0.18
TRIM13-202ENST00000378182 SRRTQ9BXP5 876 aaKnown RBP16.16■□□□□ 0.18
TRIM13-202ENST00000378182 JADE2Q9NQC1 790 aa16.16■□□□□ 0.18
TRIM13-202ENST00000378182 RBM25P49756 843 aaKnown RBP16.16■□□□□ 0.18
TRIM13-202ENST00000378182 SLC39A6Q13433 755 aa16.16■□□□□ 0.18
TRIM13-202ENST00000378182 RAB3GAP1Q15042 981 aa16.16■□□□□ 0.18
TRIM13-202ENST00000378182 PSMC4P43686 418 aa16.16■□□□□ 0.18
TRIM13-202ENST00000378182 DBF4Q9UBU7 674 aaPredicted RBP16.16■□□□□ 0.18
TRIM13-202ENST00000378182 SBNO2Q9Y2G9 1366 aa16.15■□□□□ 0.18
TRIM13-202ENST00000378182 NLRP3Q96P20 1036 aa16.15■□□□□ 0.18
TRIM13-202ENST00000378182 ODF2LQ9ULJ1 636 aa16.15■□□□□ 0.18
TRIM13-202ENST00000378182 STAT6P42226 847 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms