RNA–Protein interactions for RNA: ENST00000378045.4

FUNDC1-201, Transcript of FUN14 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FUNDC1, Length 1,196 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUNDC1-201ENST00000378045 MBIPQ9NS73 344 aa16.64■□□□□ 0.25
FUNDC1-201ENST00000378045 KLRG2A4D1S0 409 aaPredicted RBP16.63■□□□□ 0.25
FUNDC1-201ENST00000378045 RGL2O15211 777 aa16.63■□□□□ 0.25
FUNDC1-201ENST00000378045 SLC4A2P04920 1241 aa16.63■□□□□ 0.25
FUNDC1-201ENST00000378045 SYNE4Q8N205 404 aa16.63■□□□□ 0.25
FUNDC1-201ENST00000378045 RBM46Q8TBY0 533 aaKnown RBP16.63■□□□□ 0.25
FUNDC1-201ENST00000378045 C7orf43Q8WVR3 580 aa16.63■□□□□ 0.25
FUNDC1-201ENST00000378045 RPGRQ92834 1020 aaKnown RBP16.63■□□□□ 0.25
FUNDC1-201ENST00000378045 BABAM1Q9NWV8 329 aa16.63■□□□□ 0.25
FUNDC1-201ENST00000378045 ZC3H4Q9UPT8 1303 aaKnown RBP16.63■□□□□ 0.25
FUNDC1-201ENST00000378045 TAF1P21675 1872 aa16.63■□□□□ 0.25
FUNDC1-201ENST00000378045 ELL2O00472 640 aaPredicted RBP16.62■□□□□ 0.25
FUNDC1-201ENST00000378045 LTBP3Q9NS15 1303 aa16.62■□□□□ 0.25
FUNDC1-201ENST00000378045 IBTKQ9P2D0 1353 aaPredicted RBP16.62■□□□□ 0.25
FUNDC1-201ENST00000378045 DDNO94850 711 aaPredicted RBP16.61■□□□□ 0.25
FUNDC1-201ENST00000378045 SOGA3Q5TF21 947 aa16.61■□□□□ 0.25
FUNDC1-201ENST00000378045 DUSP27Q5VZP5 1158 aa16.61■□□□□ 0.25
FUNDC1-201ENST00000378045 ZNF541Q9H0D2 1346 aa16.61■□□□□ 0.25
FUNDC1-201ENST00000378045 COL4A5P29400 1685 aa16.6■□□□□ 0.25
FUNDC1-201ENST00000378045 DDX60Q8IY21 1712 aaKnown RBP16.6■□□□□ 0.25
FUNDC1-201ENST00000378045 HCLS1P14317 486 aaPredicted RBP16.6■□□□□ 0.25
FUNDC1-201ENST00000378045 CACNB1Q02641 598 aaPredicted RBP16.6■□□□□ 0.25
FUNDC1-201ENST00000378045 FKBP4Q02790 459 aaKnown RBP eCLIP16.6■□□□□ 0.25
FUNDC1-201ENST00000378045 CRY2Q49AN0 593 aa16.6■□□□□ 0.25
FUNDC1-201ENST00000378045 PPP1R42Q7Z4L9 355 aa16.6■□□□□ 0.25
FUNDC1-201ENST00000378045 CFAP44Q96MT7 982 aa16.6■□□□□ 0.25
FUNDC1-201ENST00000378045 UTP14AQ9BVJ6 771 aaKnown RBP16.6■□□□□ 0.25
FUNDC1-201ENST00000378045 DDX21Q9NR30 783 aaKnown RBP eCLIP16.6■□□□□ 0.25
FUNDC1-201ENST00000378045 POTECB2RU33 542 aa16.59■□□□□ 0.25
FUNDC1-201ENST00000378045 RIC1Q4ADV7 1423 aa16.59■□□□□ 0.25
FUNDC1-201ENST00000378045 ATP5J2-PTCD1G3V325 749 aa16.58■□□□□ 0.24
FUNDC1-201ENST00000378045 PPEF1O14829 653 aaPredicted RBP16.58■□□□□ 0.24
FUNDC1-201ENST00000378045 POTEIP0CG38 1075 aa16.58■□□□□ 0.24
FUNDC1-201ENST00000378045 POTEJP0CG39 1038 aa16.58■□□□□ 0.24
FUNDC1-201ENST00000378045 VEGFAP15692 232 aaPredicted RBP16.58■□□□□ 0.24
FUNDC1-201ENST00000378045 ALDH1B1P30837 517 aa16.58■□□□□ 0.24
FUNDC1-201ENST00000378045 ZEB1P37275 1124 aaPredicted RBP16.58■□□□□ 0.24
FUNDC1-201ENST00000378045 APLP1P51693 650 aa16.58■□□□□ 0.24
FUNDC1-201ENST00000378045 C1QBPQ07021 282 aaKnown RBP16.58■□□□□ 0.24
FUNDC1-201ENST00000378045 PARP10Q53GL7 1025 aa16.58■□□□□ 0.24
FUNDC1-201ENST00000378045 RTL5Q5HYW3 569 aaPredicted RBP16.58■□□□□ 0.24
FUNDC1-201ENST00000378045 DPY19L2Q6NUT2 758 aa16.58■□□□□ 0.24
FUNDC1-201ENST00000378045 NLRP10Q86W26 655 aa16.58■□□□□ 0.24
FUNDC1-201ENST00000378045 SNED1Q8TER0 1413 aa16.58■□□□□ 0.24
FUNDC1-201ENST00000378045 ZNF316A6NFI3 1004 aaPredicted RBP16.57■□□□□ 0.24
FUNDC1-201ENST00000378045 SMC1BQ8NDV3 1235 aa16.57■□□□□ 0.24
FUNDC1-201ENST00000378045 TSR2Q969E8 191 aaKnown RBP16.57■□□□□ 0.24
FUNDC1-201ENST00000378045 RBM17Q96I25 401 aaKnown RBP16.57■□□□□ 0.24
FUNDC1-201ENST00000378045 TRMT112Q9UI30 125 aaKnown RBP16.57■□□□□ 0.24
FUNDC1-201ENST00000378045 COL4A1P02462 1669 aa16.56■□□□□ 0.24
FUNDC1-201ENST00000378045 ABCC4O15439 1325 aa16.56■□□□□ 0.24
FUNDC1-201ENST00000378045 ZNF853P0CG23 659 aa16.56■□□□□ 0.24
FUNDC1-201ENST00000378045 IARSP41252 1262 aaKnown RBP16.56■□□□□ 0.24
FUNDC1-201ENST00000378045 TCIRG1Q13488 830 aa16.56■□□□□ 0.24
FUNDC1-201ENST00000378045 MRS2Q9HD23 443 aa16.56■□□□□ 0.24
FUNDC1-201ENST00000378045 IFT57Q9NWB7 429 aa16.56■□□□□ 0.24
FUNDC1-201ENST00000378045 SALL2Q9Y467 1007 aaPredicted RBP16.56■□□□□ 0.24
FUNDC1-201ENST00000378045 FSTL1Q12841 308 aa16.55■□□□□ 0.24
FUNDC1-201ENST00000378045 HSP90AB3PQ58FF7 597 aa16.55■□□□□ 0.24
FUNDC1-201ENST00000378045 RTKN2Q8IZC4 609 aa16.55■□□□□ 0.24
FUNDC1-201ENST00000378045 C8orf58Q8NAV2 365 aa16.55■□□□□ 0.24
FUNDC1-201ENST00000378045 NLRP3Q96P20 1036 aa16.55■□□□□ 0.24
FUNDC1-201ENST00000378045 PHAXQ9H814 394 aaKnown RBP16.55■□□□□ 0.24
FUNDC1-201ENST00000378045 DBF4Q9UBU7 674 aaPredicted RBP16.55■□□□□ 0.24
FUNDC1-201ENST00000378045 HOXA10P31260 410 aaPredicted RBP16.54■□□□□ 0.24
FUNDC1-201ENST00000378045 GNAI1P63096 354 aa16.54■□□□□ 0.24
FUNDC1-201ENST00000378045 PLBD2Q8NHP8 589 aa16.54■□□□□ 0.24
FUNDC1-201ENST00000378045 HOXB7P09629 217 aa16.53■□□□□ 0.24
FUNDC1-201ENST00000378045 ANKRD13DQ6ZTN6 518 aa16.53■□□□□ 0.24
FUNDC1-201ENST00000378045 TSPYL6Q8N831 410 aa16.53■□□□□ 0.24
FUNDC1-201ENST00000378045 FAM89AQ96GI7 184 aa16.53■□□□□ 0.24
FUNDC1-201ENST00000378045 CRAMP1Q96RY5 1269 aa16.53■□□□□ 0.24
FUNDC1-201ENST00000378045 U3KPZ7 1027 aaPredicted RBP16.53■□□□□ 0.24
FUNDC1-201ENST00000378045 RNF123Q5XPI4 1314 aa16.52■□□□□ 0.24
FUNDC1-201ENST00000378045 SH3TC1Q8TE82 1336 aa16.52■□□□□ 0.24
FUNDC1-201ENST00000378045 ANP32CO43423 234 aa16.52■□□□□ 0.24
FUNDC1-201ENST00000378045 EAPPQ56P03 285 aaPredicted RBP16.52■□□□□ 0.24
FUNDC1-201ENST00000378045 JARID2Q92833 1246 aaPredicted RBP16.52■□□□□ 0.24
FUNDC1-201ENST00000378045 GJA3Q9Y6H8 435 aa16.52■□□□□ 0.24
FUNDC1-201ENST00000378045 SCN4AP35499 1836 aa16.52■□□□□ 0.23
FUNDC1-201ENST00000378045 LTBP1Q14766 1721 aa16.51■□□□□ 0.23
FUNDC1-201ENST00000378045 CALD1Q05682 793 aaKnown RBP16.51■□□□□ 0.23
FUNDC1-201ENST00000378045 AOC3Q16853 763 aa16.51■□□□□ 0.23
FUNDC1-201ENST00000378045 RIC3Q7Z5B4 369 aa16.51■□□□□ 0.23
FUNDC1-201ENST00000378045 LARGE2Q8N3Y3 721 aa16.51■□□□□ 0.23
FUNDC1-201ENST00000378045 HYPKQ9NX55 129 aa16.51■□□□□ 0.23
FUNDC1-201ENST00000378045 GOLGA2Q08379 1002 aa16.5■□□□□ 0.23
FUNDC1-201ENST00000378045 SLC10A5Q5PT55 438 aa16.5■□□□□ 0.23
FUNDC1-201ENST00000378045 DNAJC5GQ8N7S2 189 aa16.5■□□□□ 0.23
FUNDC1-201ENST00000378045 PSMD1Q99460 953 aa16.5■□□□□ 0.23
FUNDC1-201ENST00000378045 MYD88Q99836 296 aa16.5■□□□□ 0.23
FUNDC1-201ENST00000378045 ISCA1Q9BUE6 129 aa16.5■□□□□ 0.23
FUNDC1-201ENST00000378045 PPIP5K2O43314 1243 aa16.49■□□□□ 0.23
FUNDC1-201ENST00000378045 JDP2Q8WYK2 163 aa16.49■□□□□ 0.23
FUNDC1-201ENST00000378045 TAF1DQ9H5J8 278 aaPredicted RBP16.49■□□□□ 0.23
FUNDC1-201ENST00000378045 LRRC37AA6NMS7 1700 aa16.48■□□□□ 0.23
FUNDC1-201ENST00000378045 DUOX1Q9NRD9 1551 aa16.48■□□□□ 0.23
FUNDC1-201ENST00000378045 SPEF2Q9C093 1822 aa16.48■□□□□ 0.23
FUNDC1-201ENST00000378045 FZD9O00144 591 aa16.48■□□□□ 0.23
FUNDC1-201ENST00000378045 CHADLQ6NUI6 762 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms