RNA–Protein interactions for RNA: ENST00000377823.1

CUBN-201, Transcript of cubilin, humanhuman

TSL 3 BASIC

Gene CUBN, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-201ENST00000377823 ZCCHC2Q9C0B9 1178 aaKnown RBP6.84□□□□□ -1.31
CUBN-201ENST00000377823 RTCBQ9Y3I0 505 aaKnown RBP6.84□□□□□ -1.31
CUBN-201ENST00000377823 C11orf95C9JLR9 678 aaPredicted RBP6.83□□□□□ -1.32
CUBN-201ENST00000377823 H7C1W4 665 aa6.83□□□□□ -1.32
CUBN-201ENST00000377823 EPB42P16452 691 aa6.83□□□□□ -1.32
CUBN-201ENST00000377823 C8orf34Q49A92 452 aa6.83□□□□□ -1.32
CUBN-201ENST00000377823 SAMD5Q5TGI4 173 aa6.83□□□□□ -1.32
CUBN-201ENST00000377823 FIGNL1Q6PIW4 674 aa6.83□□□□□ -1.32
CUBN-201ENST00000377823 CMTR1Q8N1G2 835 aaKnown RBP6.83□□□□□ -1.32
CUBN-201ENST00000377823 BCL2L13Q9BXK5 485 aa6.83□□□□□ -1.32
CUBN-201ENST00000377823 NUCKS1Q9H1E3 243 aaKnown RBP6.83□□□□□ -1.32
CUBN-201ENST00000377823 GGNBP2Q9H3C7 697 aa6.83□□□□□ -1.32
CUBN-201ENST00000377823 GPR182O15218 404 aa6.82□□□□□ -1.32
CUBN-201ENST00000377823 ATXN7O15265 892 aaPredicted RBP6.82□□□□□ -1.32
CUBN-201ENST00000377823 TREHO43280 583 aa6.82□□□□□ -1.32
CUBN-201ENST00000377823 RPLP1P05386 114 aaKnown RBP6.82□□□□□ -1.32
CUBN-201ENST00000377823 THBS1P07996 1170 aa6.82□□□□□ -1.32
CUBN-201ENST00000377823 RBM25P49756 843 aaKnown RBP6.82□□□□□ -1.32
CUBN-201ENST00000377823 PLCB3Q01970 1234 aa6.82□□□□□ -1.32
CUBN-201ENST00000377823 DBN1Q16643 649 aa6.82□□□□□ -1.32
CUBN-201ENST00000377823 TRIM22Q8IYM9 498 aa6.82□□□□□ -1.32
CUBN-201ENST00000377823 ZNF428Q96B54 188 aa6.82□□□□□ -1.32
CUBN-201ENST00000377823 BRD7Q9NPI1 651 aa6.82□□□□□ -1.32
CUBN-201ENST00000377823 CUEDC1Q9NWM3 386 aaPredicted RBP6.82□□□□□ -1.32
CUBN-201ENST00000377823 PCDHGC4Q9Y5F7 938 aa6.82□□□□□ -1.32
CUBN-201ENST00000377823 RBM47A0AV96 593 aaKnown RBP6.81□□□□□ -1.32
CUBN-201ENST00000377823 IGHA2P01877 340 aa6.81□□□□□ -1.32
CUBN-201ENST00000377823 ITGA6P23229 1130 aa6.81□□□□□ -1.32
CUBN-201ENST00000377823 EHHADHQ08426 723 aa6.81□□□□□ -1.32
CUBN-201ENST00000377823 DSC3Q14574 896 aa6.81□□□□□ -1.32
CUBN-201ENST00000377823 COL19A1Q14993 1142 aa6.81□□□□□ -1.32
CUBN-201ENST00000377823 GIPC2Q8TF65 315 aa6.81□□□□□ -1.32
CUBN-201ENST00000377823 NIF3L1Q9GZT8 377 aa6.81□□□□□ -1.32
CUBN-201ENST00000377823 STK17AQ9UEE5 414 aa6.81□□□□□ -1.32
CUBN-201ENST00000377823 FNDC3AQ9Y2H6 1198 aaKnown RBP6.81□□□□□ -1.32
CUBN-201ENST00000377823 DCDC2BA2VCK2 349 aa6.8□□□□□ -1.32
CUBN-201ENST00000377823 A6NHS1 94 aa6.8□□□□□ -1.32
CUBN-201ENST00000377823 UBAP1LF5GYI3 381 aa6.8□□□□□ -1.32
CUBN-201ENST00000377823 KHNYNO15037 678 aaKnown RBP6.8□□□□□ -1.32
CUBN-201ENST00000377823 P4HBP07237 508 aaKnown RBP6.8□□□□□ -1.32
CUBN-201ENST00000377823 FAM157BP0CG42 384 aa6.8□□□□□ -1.32
CUBN-201ENST00000377823 GRNP28799 593 aaKnown RBP6.8□□□□□ -1.32
CUBN-201ENST00000377823 UBAP2LQ14157 1087 aaKnown RBP6.8□□□□□ -1.32
CUBN-201ENST00000377823 TRIP4Q15650 581 aaPredicted RBP6.8□□□□□ -1.32
CUBN-201ENST00000377823 EAPPQ56P03 285 aaPredicted RBP6.8□□□□□ -1.32
CUBN-201ENST00000377823 ALKBH8Q96BT7 664 aaKnown RBP6.8□□□□□ -1.32
CUBN-201ENST00000377823 ZNF837Q96EG3 531 aaPredicted RBP6.8□□□□□ -1.32
CUBN-201ENST00000377823 GMCL1Q96IK5 515 aa6.8□□□□□ -1.32
CUBN-201ENST00000377823 KCNH4Q9UQ05 1017 aa6.8□□□□□ -1.32
CUBN-201ENST00000377823 KCNMB2Q9Y691 235 aa6.8□□□□□ -1.32
CUBN-201ENST00000377823 EFSO43281 561 aa6.79□□□□□ -1.32
CUBN-201ENST00000377823 XYLBO75191 536 aa6.79□□□□□ -1.32
CUBN-201ENST00000377823 MAPK8P45983 427 aa6.79□□□□□ -1.32
CUBN-201ENST00000377823 TNP2Q05952 138 aa6.79□□□□□ -1.32
CUBN-201ENST00000377823 FMR1Q06787 632 aaKnown RBP eCLIP6.79□□□□□ -1.32
CUBN-201ENST00000377823 SFSWAPQ12872 951 aaKnown RBP6.79□□□□□ -1.32
CUBN-201ENST00000377823 TREML4Q6UXN2 200 aa6.79□□□□□ -1.32
CUBN-201ENST00000377823 FBXO33Q7Z6M2 555 aa6.79□□□□□ -1.32
CUBN-201ENST00000377823 GTPBP3Q969Y2 492 aaKnown RBP6.79□□□□□ -1.32
CUBN-201ENST00000377823 POTECB2RU33 542 aa6.78□□□□□ -1.32
CUBN-201ENST00000377823 BNIP3LO60238 219 aa6.78□□□□□ -1.32
CUBN-201ENST00000377823 PPFIA3O75145 1194 aa6.78□□□□□ -1.32
CUBN-201ENST00000377823 MAPTP10636 758 aaKnown RBP6.78□□□□□ -1.32
CUBN-201ENST00000377823 ZNF16P17020 682 aaPredicted RBP6.78□□□□□ -1.32
CUBN-201ENST00000377823 KCNQ4P56696 695 aa6.78□□□□□ -1.32
CUBN-201ENST00000377823 ZNF326Q5BKZ1 582 aaKnown RBP6.78□□□□□ -1.32
CUBN-201ENST00000377823 LCE2AQ5TA79 106 aaPredicted RBP6.78□□□□□ -1.32
CUBN-201ENST00000377823 PDE12Q6L8Q7 609 aaKnown RBP6.78□□□□□ -1.32
CUBN-201ENST00000377823 ZNF438Q7Z4V0 828 aa6.78□□□□□ -1.32
CUBN-201ENST00000377823 ABHD17AQ96GS6 310 aa6.78□□□□□ -1.32
CUBN-201ENST00000377823 NEFLP07196 543 aa6.77□□□□□ -1.33
CUBN-201ENST00000377823 TAGLNQ01995 201 aaKnown RBP6.77□□□□□ -1.33
CUBN-201ENST00000377823 LAMC2Q13753 1193 aa6.77□□□□□ -1.33
CUBN-201ENST00000377823 XKR5Q6UX68 686 aa6.77□□□□□ -1.33
CUBN-201ENST00000377823 ELP3Q9H9T3 547 aa6.77□□□□□ -1.33
CUBN-201ENST00000377823 C11orf16Q9NQ32 467 aa6.77□□□□□ -1.33
CUBN-201ENST00000377823 STRN4Q9NRL3 753 aa6.77□□□□□ -1.33
CUBN-201ENST00000377823 NDFIP2Q9NV92 336 aa6.77□□□□□ -1.33
CUBN-201ENST00000377823 CDC14CA4D256 554 aa6.76□□□□□ -1.33
CUBN-201ENST00000377823 EGFRP00533 1210 aa6.76□□□□□ -1.33
CUBN-201ENST00000377823 LDHBP07195 334 aaKnown RBP6.76□□□□□ -1.33
CUBN-201ENST00000377823 ORC1Q13415 861 aa6.76□□□□□ -1.33
CUBN-201ENST00000377823 FOXR1Q6PIV2 292 aa6.76□□□□□ -1.33
CUBN-201ENST00000377823 VWA5B2Q8N398 1253 aa6.76□□□□□ -1.33
CUBN-201ENST00000377823 MARK1Q9P0L2 795 aa6.76□□□□□ -1.33
CUBN-201ENST00000377823 ATXN7L1Q9ULK2 861 aaPredicted RBP6.76□□□□□ -1.33
CUBN-201ENST00000377823 PNMA6FA0A0J9YX94 578 aa6.75□□□□□ -1.33
CUBN-201ENST00000377823 UNCXA6NJT0 531 aa6.75□□□□□ -1.33
CUBN-201ENST00000377823 TNFRSF21O75509 655 aa6.75□□□□□ -1.33
CUBN-201ENST00000377823 SASH3O75995 380 aa6.75□□□□□ -1.33
CUBN-201ENST00000377823 CD33P20138 364 aa6.75□□□□□ -1.33
CUBN-201ENST00000377823 ATP2B2Q01814 1243 aa6.75□□□□□ -1.33
CUBN-201ENST00000377823 CCINQ13939 588 aa6.75□□□□□ -1.33
CUBN-201ENST00000377823 GRIN2CQ14957 1233 aa6.75□□□□□ -1.33
CUBN-201ENST00000377823 ENOX2Q16206 610 aaKnown RBP6.75□□□□□ -1.33
CUBN-201ENST00000377823 NLRP13Q86W25 1043 aa6.75□□□□□ -1.33
CUBN-201ENST00000377823 TRERF1Q96PN7 1200 aa6.75□□□□□ -1.33
CUBN-201ENST00000377823 CSRNP1Q96S65 589 aa6.75□□□□□ -1.33
CUBN-201ENST00000377823 GSX2Q9BZM3 304 aa6.75□□□□□ -1.33
CUBN-201ENST00000377823 TMEM63CQ9P1W3 806 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms