RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 STX6O43752 255 aa18.21■□□□□ 0.51
MSH5-203ENST00000375750 CASTP20810 708 aaKnown RBP18.21■□□□□ 0.51
MSH5-203ENST00000375750 RAD50Q92878 1312 aa18.21■□□□□ 0.51
MSH5-203ENST00000375750 DNM1Q05193 864 aaKnown RBP18.21■□□□□ 0.51
MSH5-203ENST00000375750 CCDC183Q5T5S1 534 aa18.21■□□□□ 0.51
MSH5-203ENST00000375750 ZNF790Q6PG37 636 aa18.21■□□□□ 0.51
MSH5-203ENST00000375750 PRDM10Q9NQV6 1147 aa18.21■□□□□ 0.51
MSH5-203ENST00000375750 DCAF5Q96JK2 942 aa18.2■□□□□ 0.5
MSH5-203ENST00000375750 DYNC1I1O14576 645 aa18.19■□□□□ 0.5
MSH5-203ENST00000375750 PROSER3Q2NL68 480 aa18.19■□□□□ 0.5
MSH5-203ENST00000375750 NECAB1Q8N987 351 aa18.19■□□□□ 0.5
MSH5-203ENST00000375750 SMC3Q9UQE7 1217 aa18.19■□□□□ 0.5
MSH5-203ENST00000375750 PHF14O94880 888 aa18.19■□□□□ 0.5
MSH5-203ENST00000375750 ZCRB1Q8TBF4 217 aaKnown RBP18.19■□□□□ 0.5
MSH5-203ENST00000375750 HEG1Q9ULI3 1381 aa18.19■□□□□ 0.5
MSH5-203ENST00000375750 F13A1P00488 732 aa18.19■□□□□ 0.5
MSH5-203ENST00000375750 NOLC1Q14978 699 aaKnown RBP eCLIP18.19■□□□□ 0.5
MSH5-203ENST00000375750 FAM173BQ6P4H8 233 aa18.19■□□□□ 0.5
MSH5-203ENST00000375750 BTG4Q9NY30 223 aa18.19■□□□□ 0.5
MSH5-203ENST00000375750 LIMCH1Q9UPQ0 1083 aa18.19■□□□□ 0.5
MSH5-203ENST00000375750 ABCA3Q99758 1704 aa18.18■□□□□ 0.5
MSH5-203ENST00000375750 GJB2P29033 226 aa18.18■□□□□ 0.5
MSH5-203ENST00000375750 PRPF40BQ6NWY9 871 aaKnown RBP18.18■□□□□ 0.5
MSH5-203ENST00000375750 IL17RAQ96F46 866 aa18.18■□□□□ 0.5
MSH5-203ENST00000375750 CARD10Q9BWT7 1032 aa18.18■□□□□ 0.5
MSH5-203ENST00000375750 POLA2Q14181 598 aa18.18■□□□□ 0.5
MSH5-203ENST00000375750 SPC24Q8NBT2 197 aa18.18■□□□□ 0.5
MSH5-203ENST00000375750 DBF4Q9UBU7 674 aaPredicted RBP18.18■□□□□ 0.5
MSH5-203ENST00000375750 PA2G4Q9UQ80 394 aaKnown RBP18.18■□□□□ 0.5
MSH5-203ENST00000375750 ADAMTS7Q9UKP4 1686 aa18.17■□□□□ 0.5
MSH5-203ENST00000375750 PI4KAP2A4QPH2 592 aa18.17■□□□□ 0.5
MSH5-203ENST00000375750 IL2RBP14784 551 aa18.17■□□□□ 0.5
MSH5-203ENST00000375750 PI4KAP1Q8N8J0 262 aa18.17■□□□□ 0.5
MSH5-203ENST00000375750 JAKMIP1Q96N16 626 aaKnown RBP18.17■□□□□ 0.5
MSH5-203ENST00000375750 ROBO1Q9Y6N7 1651 aa18.17■□□□□ 0.5
MSH5-203ENST00000375750 VPS37CA5D8V6 355 aaPredicted RBP18.17■□□□□ 0.5
MSH5-203ENST00000375750 CABP4P57796 275 aa18.17■□□□□ 0.5
MSH5-203ENST00000375750 ST3GAL1Q11201 340 aa18.17■□□□□ 0.5
MSH5-203ENST00000375750 OS9Q13438 667 aaPredicted RBP18.17■□□□□ 0.5
MSH5-203ENST00000375750 TCEANC2Q96MN5 208 aa18.17■□□□□ 0.5
MSH5-203ENST00000375750 UBE2HP62256 183 aa18.16■□□□□ 0.5
MSH5-203ENST00000375750 CNTROBQ8N137 903 aa18.16■□□□□ 0.5
MSH5-203ENST00000375750 TMEM87AQ8NBN3 555 aa18.16■□□□□ 0.5
MSH5-203ENST00000375750 ZNF496Q96IT1 587 aaPredicted RBP18.16■□□□□ 0.5
MSH5-203ENST00000375750 HYPKQ9NX55 129 aa18.16■□□□□ 0.5
MSH5-203ENST00000375750 SIPA1L3O60292 1781 aaPredicted RBP18.16■□□□□ 0.5
MSH5-203ENST00000375750 FERMT3Q86UX7 667 aa18.16■□□□□ 0.5
MSH5-203ENST00000375750 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.16■□□□□ 0.5
MSH5-203ENST00000375750 SCN11AQ9UI33 1791 aa18.16■□□□□ 0.5
MSH5-203ENST00000375750 LTBP4Q8N2S1 1624 aa18.15■□□□□ 0.5
MSH5-203ENST00000375750 PIBF1Q8WXW3 757 aa18.15■□□□□ 0.5
MSH5-203ENST00000375750 AOX1Q06278 1338 aa18.15■□□□□ 0.5
MSH5-203ENST00000375750 KDM4AO75164 1064 aa18.15■□□□□ 0.5
MSH5-203ENST00000375750 ZNF710Q8N1W2 664 aa18.15■□□□□ 0.5
MSH5-203ENST00000375750 KIF1BPQ96EK5 621 aa18.15■□□□□ 0.5
MSH5-203ENST00000375750 CHMP4AQ9BY43 222 aa18.15■□□□□ 0.5
MSH5-203ENST00000375750 MTMR6Q9Y217 621 aa18.15■□□□□ 0.5
MSH5-203ENST00000375750 RAB11FIP3O75154 756 aa18.14■□□□□ 0.5
MSH5-203ENST00000375750 MYRIPQ8NFW9 859 aa18.14■□□□□ 0.5
MSH5-203ENST00000375750 PYCARDQ9ULZ3 195 aa18.14■□□□□ 0.5
MSH5-203ENST00000375750 CACNA1FO60840 1977 aa18.14■□□□□ 0.5
MSH5-203ENST00000375750 CAMK4Q16566 473 aa18.14■□□□□ 0.49
MSH5-203ENST00000375750 PDRG1Q9NUG6 133 aa18.14■□□□□ 0.49
MSH5-203ENST00000375750 PCDH11XQ9BZA7 1347 aa18.14■□□□□ 0.49
MSH5-203ENST00000375750 PCDH11YQ9BZA8 1340 aa18.14■□□□□ 0.49
MSH5-203ENST00000375750 UVSSAQ2YD98 709 aa18.13■□□□□ 0.49
MSH5-203ENST00000375750 TTC5Q8N0Z6 440 aa18.13■□□□□ 0.49
MSH5-203ENST00000375750 DNAAF4Q8WXU2 420 aa18.13■□□□□ 0.49
MSH5-203ENST00000375750 FUCA2Q9BTY2 467 aa18.13■□□□□ 0.49
MSH5-203ENST00000375750 DIAPH3Q9NSV4 1193 aa18.13■□□□□ 0.49
MSH5-203ENST00000375750 PKD1L3Q7Z443 1732 aa18.13■□□□□ 0.49
MSH5-203ENST00000375750 ME3Q16798 604 aa18.13■□□□□ 0.49
MSH5-203ENST00000375750 BEND3Q5T5X7 828 aa18.13■□□□□ 0.49
MSH5-203ENST00000375750 KCNF1Q9H3M0 494 aa18.13■□□□□ 0.49
MSH5-203ENST00000375750 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.13■□□□□ 0.49
MSH5-203ENST00000375750 PIP4K2BP78356 416 aa18.13■□□□□ 0.49
MSH5-203ENST00000375750 AIMP1Q12904 312 aaKnown RBP18.13■□□□□ 0.49
MSH5-203ENST00000375750 PDIA6Q15084 440 aa18.13■□□□□ 0.49
MSH5-203ENST00000375750 FAM184AQ8NB25 1140 aa18.13■□□□□ 0.49
MSH5-203ENST00000375750 USP16Q9Y5T5 823 aa18.13■□□□□ 0.49
MSH5-203ENST00000375750 MAP7D2Q96T17 732 aa18.12■□□□□ 0.49
MSH5-203ENST00000375750 TAF6LQ9Y6J9 622 aa18.12■□□□□ 0.49
MSH5-203ENST00000375750 ADCY9O60503 1353 aa18.12■□□□□ 0.49
MSH5-203ENST00000375750 MYL6BP14649 208 aa18.12■□□□□ 0.49
MSH5-203ENST00000375750 PIP4K2AP48426 406 aaPredicted RBP18.12■□□□□ 0.49
MSH5-203ENST00000375750 FAM227BQ96M60 508 aa18.11■□□□□ 0.49
MSH5-203ENST00000375750 MAP3K2Q9Y2U5 619 aa18.11■□□□□ 0.49
MSH5-203ENST00000375750 PLEKHG2Q9H7P9 1386 aa18.11■□□□□ 0.49
MSH5-203ENST00000375750 TPCN1Q9ULQ1 816 aa18.1■□□□□ 0.49
MSH5-203ENST00000375750 DDX21Q9NR30 783 aaKnown RBP eCLIP18.1■□□□□ 0.49
MSH5-203ENST00000375750 PRDM4Q9UKN5 801 aa18.1■□□□□ 0.49
MSH5-203ENST00000375750 ADAMTS2O95450 1211 aa18.09■□□□□ 0.49
MSH5-203ENST00000375750 LIG1P18858 919 aa18.09■□□□□ 0.49
MSH5-203ENST00000375750 SNRPA1P09661 255 aaKnown RBP18.09■□□□□ 0.49
MSH5-203ENST00000375750 CWF19L2Q2TBE0 894 aaKnown RBP18.09■□□□□ 0.49
MSH5-203ENST00000375750 CDC37L1Q7L3B6 337 aa18.09■□□□□ 0.49
MSH5-203ENST00000375750 CKAP2LQ8IYA6 745 aa18.09■□□□□ 0.49
MSH5-203ENST00000375750 FMNL2Q96PY5 1086 aa18.09■□□□□ 0.49
MSH5-203ENST00000375750 TFIP11Q9UBB9 837 aaKnown RBP18.09■□□□□ 0.49
MSH5-203ENST00000375750 KSR2Q6VAB6 950 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms