RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 SUSD4Q5VX71 490 aa17.29■□□□□ 0.36
TRAPPC3-201ENST00000373159 CNTROBQ8N137 903 aa17.29■□□□□ 0.36
TRAPPC3-201ENST00000373159 RPGRQ92834 1020 aaKnown RBP17.29■□□□□ 0.36
TRAPPC3-201ENST00000373159 CRAMP1Q96RY5 1269 aa17.29■□□□□ 0.36
TRAPPC3-201ENST00000373159 ERBB4Q15303 1308 aa17.28■□□□□ 0.36
TRAPPC3-201ENST00000373159 UBN2Q6ZU65 1347 aa17.28■□□□□ 0.36
TRAPPC3-201ENST00000373159 GPTP24298 496 aa17.28■□□□□ 0.36
TRAPPC3-201ENST00000373159 GIGYF2Q6Y7W6 1299 aaKnown RBP17.28■□□□□ 0.36
TRAPPC3-201ENST00000373159 RBM17Q96I25 401 aaKnown RBP17.28■□□□□ 0.36
TRAPPC3-201ENST00000373159 THUMPD2Q9BTF0 503 aaKnown RBP17.28■□□□□ 0.36
TRAPPC3-201ENST00000373159 ZBTB3Q9H5J0 574 aa17.28■□□□□ 0.36
TRAPPC3-201ENST00000373159 CACNA1SQ13698 1873 aa17.28■□□□□ 0.36
TRAPPC3-201ENST00000373159 RIC1Q4ADV7 1423 aa17.28■□□□□ 0.36
TRAPPC3-201ENST00000373159 FOXN1O15353 648 aa17.27■□□□□ 0.36
TRAPPC3-201ENST00000373159 EIF6P56537 245 aaKnown RBP17.27■□□□□ 0.36
TRAPPC3-201ENST00000373159 MAP1SQ66K74 1059 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC3-201ENST00000373159 PRDM10Q9NQV6 1147 aa17.27■□□□□ 0.36
TRAPPC3-201ENST00000373159 NTSR2O95665 410 aa17.26■□□□□ 0.35
TRAPPC3-201ENST00000373159 PARP10Q53GL7 1025 aa17.26■□□□□ 0.35
TRAPPC3-201ENST00000373159 SLC10A5Q5PT55 438 aa17.26■□□□□ 0.35
TRAPPC3-201ENST00000373159 PPP1R42Q7Z4L9 355 aa17.26■□□□□ 0.35
TRAPPC3-201ENST00000373159 WBP1LQ9NX94 342 aa17.26■□□□□ 0.35
TRAPPC3-201ENST00000373159 RASSF10A6NK89 507 aa17.25■□□□□ 0.35
TRAPPC3-201ENST00000373159 CTCFP49711 727 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC3-201ENST00000373159 DEFB115Q30KQ5 88 aa17.25■□□□□ 0.35
TRAPPC3-201ENST00000373159 LRP10Q7Z4F1 713 aa17.25■□□□□ 0.35
TRAPPC3-201ENST00000373159 LARGE2Q8N3Y3 721 aa17.25■□□□□ 0.35
TRAPPC3-201ENST00000373159 NLRP3Q96P20 1036 aa17.25■□□□□ 0.35
TRAPPC3-201ENST00000373159 GJA3Q9Y6H8 435 aa17.25■□□□□ 0.35
TRAPPC3-201ENST00000373159 MAPK8IP3Q9UPT6 1336 aa17.24■□□□□ 0.35
TRAPPC3-201ENST00000373159 PPEF1O14829 653 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC3-201ENST00000373159 LMOD1P29536 600 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC3-201ENST00000373159 PDIA6Q15084 440 aa17.24■□□□□ 0.35
TRAPPC3-201ENST00000373159 C3orf67Q6ZVT6 689 aa17.24■□□□□ 0.35
TRAPPC3-201ENST00000373159 AIDAQ96BJ3 306 aa17.24■□□□□ 0.35
TRAPPC3-201ENST00000373159 VPS33BQ9H267 617 aa17.24■□□□□ 0.35
TRAPPC3-201ENST00000373159 BABAM1Q9NWV8 329 aa17.24■□□□□ 0.35
TRAPPC3-201ENST00000373159 TSPYL4Q9UJ04 414 aa17.24■□□□□ 0.35
TRAPPC3-201ENST00000373159 SCNN1DP51172 638 aa17.23■□□□□ 0.35
TRAPPC3-201ENST00000373159 UTP14AQ9BVJ6 771 aaKnown RBP17.23■□□□□ 0.35
TRAPPC3-201ENST00000373159 DDX21Q9NR30 783 aaKnown RBP eCLIP17.23■□□□□ 0.35
TRAPPC3-201ENST00000373159 ADAMTSL1Q8N6G6 1762 aa17.23■□□□□ 0.35
TRAPPC3-201ENST00000373159 TCERG1O14776 1098 aaKnown RBP17.22■□□□□ 0.35
TRAPPC3-201ENST00000373159 EPS15P42566 896 aa17.22■□□□□ 0.35
TRAPPC3-201ENST00000373159 TMX4Q9H1E5 349 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC3-201ENST00000373159 ATP6V0A2Q9Y487 856 aa17.22■□□□□ 0.35
TRAPPC3-201ENST00000373159 LAMB4A4D0S4 1761 aa17.22■□□□□ 0.35
TRAPPC3-201ENST00000373159 NUP98P52948 1817 aa17.21■□□□□ 0.35
TRAPPC3-201ENST00000373159 KDM3BQ7LBC6 1761 aa17.21■□□□□ 0.35
TRAPPC3-201ENST00000373159 COL4A5P29400 1685 aa17.21■□□□□ 0.35
TRAPPC3-201ENST00000373159 EIF2S2P20042 333 aaKnown RBP17.21■□□□□ 0.35
TRAPPC3-201ENST00000373159 RIPK4P57078 832 aa17.21■□□□□ 0.35
TRAPPC3-201ENST00000373159 USP50Q70EL3 339 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC3-201ENST00000373159 NIM1KQ8IY84 436 aa17.21■□□□□ 0.35
TRAPPC3-201ENST00000373159 BBOX1O75936 387 aa17.2■□□□□ 0.34
TRAPPC3-201ENST00000373159 MAP2K1Q02750 393 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC3-201ENST00000373159 SLC51AQ86UW1 340 aa17.2■□□□□ 0.34
TRAPPC3-201ENST00000373159 ABT1Q9ULW3 272 aaKnown RBP17.2■□□□□ 0.34
TRAPPC3-201ENST00000373159 WDR33Q9C0J8 1336 aaKnown RBP17.2■□□□□ 0.34
TRAPPC3-201ENST00000373159 PPIP5K2O43314 1243 aa17.19■□□□□ 0.34
TRAPPC3-201ENST00000373159 PROSER3Q2NL68 480 aa17.19■□□□□ 0.34
TRAPPC3-201ENST00000373159 SUPT20HQ8NEM7 779 aa17.19■□□□□ 0.34
TRAPPC3-201ENST00000373159 RTFDC1Q9BY42 306 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC3-201ENST00000373159 DLG5Q8TDM6 1919 aa17.18■□□□□ 0.34
TRAPPC3-201ENST00000373159 LBX1P52954 281 aa17.18■□□□□ 0.34
TRAPPC3-201ENST00000373159 AOC3Q16853 763 aa17.18■□□□□ 0.34
TRAPPC3-201ENST00000373159 HSP90AB3PQ58FF7 597 aa17.18■□□□□ 0.34
TRAPPC3-201ENST00000373159 SP8Q8IXZ3 490 aa17.18■□□□□ 0.34
TRAPPC3-201ENST00000373159 ZNRF3Q9ULT6 936 aa17.18■□□□□ 0.34
TRAPPC3-201ENST00000373159 ANXA1P04083 346 aa17.17■□□□□ 0.34
TRAPPC3-201ENST00000373159 TMPOP42166 694 aaKnown RBP17.17■□□□□ 0.34
TRAPPC3-201ENST00000373159 CXCL9Q07325 125 aa17.17■□□□□ 0.34
TRAPPC3-201ENST00000373159 COPS6Q7L5N1 327 aa17.17■□□□□ 0.34
TRAPPC3-201ENST00000373159 GPRC5DQ9NZD1 345 aa17.17■□□□□ 0.34
TRAPPC3-201ENST00000373159 ABCC4O15439 1325 aa17.17■□□□□ 0.34
TRAPPC3-201ENST00000373159 HSPA8P11142 646 aaKnown RBP17.16■□□□□ 0.34
TRAPPC3-201ENST00000373159 FMR1Q06787 632 aaKnown RBP eCLIP17.16■□□□□ 0.34
TRAPPC3-201ENST00000373159 LMOD3Q0VAK6 560 aa17.16■□□□□ 0.34
TRAPPC3-201ENST00000373159 TCIRG1Q13488 830 aa17.16■□□□□ 0.34
TRAPPC3-201ENST00000373159 RALBP1Q15311 655 aa17.16■□□□□ 0.34
TRAPPC3-201ENST00000373159 CST9Q5W186 159 aa17.16■□□□□ 0.34
TRAPPC3-201ENST00000373159 NLRP10Q86W26 655 aa17.16■□□□□ 0.34
TRAPPC3-201ENST00000373159 ADARB2Q9NS39 739 aaKnown RBP17.16■□□□□ 0.34
TRAPPC3-201ENST00000373159 HCLS1P14317 486 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC3-201ENST00000373159 ECE1P42892 770 aa17.15■□□□□ 0.34
TRAPPC3-201ENST00000373159 DPP8Q6V1X1 898 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC3-201ENST00000373159 MPNDQ8N594 471 aa17.15■□□□□ 0.34
TRAPPC3-201ENST00000373159 XAGE3Q8WTP9 111 aa17.15■□□□□ 0.34
TRAPPC3-201ENST00000373159 LTBP1Q14766 1721 aa17.14■□□□□ 0.33
TRAPPC3-201ENST00000373159 TRAF5O00463 557 aa17.14■□□□□ 0.33
TRAPPC3-201ENST00000373159 CHL1O00533 1208 aa17.14■□□□□ 0.33
TRAPPC3-201ENST00000373159 KIAA2012Q0VF49 1180 aa17.14■□□□□ 0.33
TRAPPC3-201ENST00000373159 AIMP1Q12904 312 aaKnown RBP17.14■□□□□ 0.33
TRAPPC3-201ENST00000373159 DDX46Q7L014 1031 aaKnown RBP17.14■□□□□ 0.33
TRAPPC3-201ENST00000373159 CAPNS2Q96L46 248 aa17.14■□□□□ 0.33
TRAPPC3-201ENST00000373159 PGAP2Q9UHJ9 254 aa17.14■□□□□ 0.33
TRAPPC3-201ENST00000373159 TRMT112Q9UI30 125 aaKnown RBP17.14■□□□□ 0.33
TRAPPC3-201ENST00000373159 CIAPIN1Q6FI81 312 aa17.13■□□□□ 0.33
TRAPPC3-201ENST00000373159 GPR101Q96P66 508 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC3-201ENST00000373159 TLL2Q9Y6L7 1015 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms